RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 CFHR3Q02985 330 aa8.62□□□□□ -1.03
TRIM3-210ENST00000530724 SHISA2Q6UWI4 295 aa8.62□□□□□ -1.03
TRIM3-210ENST00000530724 C5orf38Q86SI9 138 aa8.62□□□□□ -1.03
TRIM3-210ENST00000530724 LINC00467Q9BRT7 94 aa8.62□□□□□ -1.03
TRIM3-210ENST00000530724 JPT2Q9H910 190 aa8.62□□□□□ -1.03
TRIM3-210ENST00000530724 PEMTQ9UBM1 199 aa8.62□□□□□ -1.03
TRIM3-210ENST00000530724 A0A087WWL8 130 aa8.61□□□□□ -1.03
TRIM3-210ENST00000530724 IGLV5-39A0A0G2JS06 123 aa8.61□□□□□ -1.03
TRIM3-210ENST00000530724 F5H697 171 aa8.61□□□□□ -1.03
TRIM3-210ENST00000530724 COX7A2LO14548 114 aa8.61□□□□□ -1.03
TRIM3-210ENST00000530724 UQCRQO14949 82 aa8.61□□□□□ -1.03
TRIM3-210ENST00000530724 TGFAP01135 160 aa8.61□□□□□ -1.03
TRIM3-210ENST00000530724 RPS28P62857 69 aaKnown RBP8.61□□□□□ -1.03
TRIM3-210ENST00000530724 HERV-K104P63124 156 aa8.61□□□□□ -1.03
TRIM3-210ENST00000530724 ZNF415Q09FC8 603 aa8.61□□□□□ -1.03
TRIM3-210ENST00000530724 ADAMTSL4-AS1Q5T5F5 129 aa8.61□□□□□ -1.03
TRIM3-210ENST00000530724 LINC00526Q96FQ7 95 aa8.61□□□□□ -1.03
TRIM3-210ENST00000530724 PIMREGQ9BSJ6 248 aa8.61□□□□□ -1.03
TRIM3-210ENST00000530724 SPRY2O43597 315 aa8.6□□□□□ -1.03
TRIM3-210ENST00000530724 HIST1H4AP62805 103 aaKnown RBP8.6□□□□□ -1.03
TRIM3-210ENST00000530724 SMIM20Q8N5G0 67 aa8.6□□□□□ -1.03
TRIM3-210ENST00000530724 ZZEF1O43149 2961 aa8.59□□□□□ -1.03
TRIM3-210ENST00000530724 PKDREJQ9NTG1 2253 aa8.59□□□□□ -1.03
TRIM3-210ENST00000530724 F6UB75 175 aa8.59□□□□□ -1.03
TRIM3-210ENST00000530724 PF4P02776 101 aa8.59□□□□□ -1.03
TRIM3-210ENST00000530724 CD28P10747 220 aa8.59□□□□□ -1.03
TRIM3-210ENST00000530724 RPL11P62913 178 aaKnown RBP8.59□□□□□ -1.03
TRIM3-210ENST00000530724 ZNF56Q15929 161 aa8.59□□□□□ -1.03
TRIM3-210ENST00000530724 BEAN1Q3B7T3 259 aa8.59□□□□□ -1.03
TRIM3-210ENST00000530724 LRRC75A-AS1Q8N1F1 130 aa8.59□□□□□ -1.03
TRIM3-210ENST00000530724 C3orf22Q8N5N4 141 aa8.59□□□□□ -1.03
TRIM3-210ENST00000530724 DEFB123Q8N688 67 aa8.59□□□□□ -1.03
TRIM3-210ENST00000530724 MUC4Q99102 2169 aa8.58□□□□□ -1.04
TRIM3-210ENST00000530724 A6NDX4 124 aa8.58□□□□□ -1.04
TRIM3-210ENST00000530724 K7EQG2 157 aa8.58□□□□□ -1.04
TRIM3-210ENST00000530724 TRBV12-3P01733 135 aa8.58□□□□□ -1.04
TRIM3-210ENST00000530724 OPRPNQ99935 248 aaPredicted RBP8.58□□□□□ -1.04
TRIM3-210ENST00000530724 TRIOBPQ9H2D6 2365 aa8.58□□□□□ -1.04
TRIM3-210ENST00000530724 NCOR1O75376 2440 aa8.57□□□□□ -1.04
TRIM3-210ENST00000530724 H7C2G1 150 aa8.57□□□□□ -1.04
TRIM3-210ENST00000530724 J3KRW8 73 aa8.57□□□□□ -1.04
TRIM3-210ENST00000530724 LY6HO94772 140 aa8.57□□□□□ -1.04
TRIM3-210ENST00000530724 INAFM2P0DMQ5 153 aa8.57□□□□□ -1.04
TRIM3-210ENST00000530724 CIRBPQ14011 172 aaKnown RBP8.57□□□□□ -1.04
TRIM3-210ENST00000530724 NRGNQ92686 78 aa8.57□□□□□ -1.04
TRIM3-210ENST00000530724 CITED2Q99967 270 aaPredicted RBP8.57□□□□□ -1.04
TRIM3-210ENST00000530724 OVOL2Q9BRP0 275 aa8.57□□□□□ -1.04
TRIM3-210ENST00000530724 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
TRIM3-210ENST00000530724 VPREB3Q9UKI3 123 aa8.57□□□□□ -1.04
TRIM3-210ENST00000530724 UBE2D4Q9Y2X8 147 aa8.57□□□□□ -1.04
TRIM3-210ENST00000530724 ROS1P08922 2347 aa8.57□□□□□ -1.04
TRIM3-210ENST00000530724 TRAV12-3A0A0B4J271 114 aa8.56□□□□□ -1.04
TRIM3-210ENST00000530724 NDUFA7O95182 113 aa8.56□□□□□ -1.04
TRIM3-210ENST00000530724 CRYGAP11844 174 aa8.56□□□□□ -1.04
TRIM3-210ENST00000530724 PRRC2CQ9Y520 2896 aaKnown RBP8.56□□□□□ -1.04
TRIM3-210ENST00000530724 K7ENP7 123 aa8.55□□□□□ -1.04
TRIM3-210ENST00000530724 PRSS2P07478 247 aa8.55□□□□□ -1.04
TRIM3-210ENST00000530724 DEFB1P60022 68 aa8.55□□□□□ -1.04
TRIM3-210ENST00000530724 SNRPD3P62318 126 aaKnown RBP8.55□□□□□ -1.04
TRIM3-210ENST00000530724 LINC00308Q8TCZ7 52 aa8.55□□□□□ -1.04
TRIM3-210ENST00000530724 SPXQ9BT56 116 aa8.55□□□□□ -1.04
TRIM3-210ENST00000530724 CSDC2Q9Y534 153 aaKnown RBP8.55□□□□□ -1.04
TRIM3-210ENST00000530724 ZNF318Q5VUA4 2279 aa8.55□□□□□ -1.04
TRIM3-210ENST00000530724 COL6A3P12111 3177 aa8.54□□□□□ -1.04
TRIM3-210ENST00000530724 GRNP28799 593 aaKnown RBP8.54□□□□□ -1.04
TRIM3-210ENST00000530724 ADORA2A-AS1P86434 159 aa8.54□□□□□ -1.04
TRIM3-210ENST00000530724 CLEC2BQ92478 149 aa8.54□□□□□ -1.04
TRIM3-210ENST00000530724 DUX3Q96PT4 197 aa8.54□□□□□ -1.04
TRIM3-210ENST00000530724 BEX4Q9NWD9 120 aaPredicted RBP8.54□□□□□ -1.04
TRIM3-210ENST00000530724 OTOGLQ3ZCN5 2332 aa8.53□□□□□ -1.04
TRIM3-210ENST00000530724 TRAV8-3A0A0A6YYJ7 113 aa8.53□□□□□ -1.04
TRIM3-210ENST00000530724 FAM236AA0A1B0GUQ0 79 aa8.53□□□□□ -1.04
TRIM3-210ENST00000530724 FAM236BA0A1B0GV22 79 aa8.53□□□□□ -1.04
TRIM3-210ENST00000530724 COX7CP15954 63 aa8.53□□□□□ -1.04
TRIM3-210ENST00000530724 FAM74A4Q5TZK3 123 aa8.53□□□□□ -1.04
TRIM3-210ENST00000530724 OBSCN-AS1Q96MR7 158 aa8.53□□□□□ -1.04
TRIM3-210ENST00000530724 CELSR3Q9NYQ7 3312 aa8.52□□□□□ -1.04
TRIM3-210ENST00000530724 IGHV3-53P01767 116 aa8.52□□□□□ -1.05
TRIM3-210ENST00000530724 HERVK_113P63121 156 aa8.52□□□□□ -1.05
TRIM3-210ENST00000530724 ZNF625Q96I27 306 aaPredicted RBP8.52□□□□□ -1.05
TRIM3-210ENST00000530724 C2orf48Q96LS8 159 aa8.52□□□□□ -1.05
TRIM3-210ENST00000530724 CHCHD5Q9BSY4 110 aa8.52□□□□□ -1.05
TRIM3-210ENST00000530724 C22orf24Q9Y442 160 aa8.52□□□□□ -1.05
TRIM3-210ENST00000530724 WNK2Q9Y3S1 2297 aa8.52□□□□□ -1.05
TRIM3-210ENST00000530724 ANKHD1Q8IWZ3 2542 aaKnown RBP8.51□□□□□ -1.05
TRIM3-210ENST00000530724 ATOX1O00244 68 aa8.51□□□□□ -1.05
TRIM3-210ENST00000530724 RPL28P46779 137 aaKnown RBP8.51□□□□□ -1.05
TRIM3-210ENST00000530724 IGHV3-64A0A075B6Q5 118 aa8.5□□□□□ -1.05
TRIM3-210ENST00000530724 J3KT08 172 aa8.5□□□□□ -1.05
TRIM3-210ENST00000530724 CCL21O00585 134 aa8.5□□□□□ -1.05
TRIM3-210ENST00000530724 PSMB8P28062 276 aa8.5□□□□□ -1.05
TRIM3-210ENST00000530724 TMEM219Q86XT9 240 aa8.5□□□□□ -1.05
TRIM3-210ENST00000530724 SMCR5Q8TEV8 140 aa8.5□□□□□ -1.05
TRIM3-210ENST00000530724 SPENQ96T58 3664 aaKnown RBP8.5□□□□□ -1.05
TRIM3-210ENST00000530724 C9orf153Q5TBE3 101 aa8.49□□□□□ -1.05
TRIM3-210ENST00000530724 DMDP11532 3685 aa8.49□□□□□ -1.05
TRIM3-210ENST00000530724 TRAV13-2A0A0B4J235 113 aa8.48□□□□□ -1.05
TRIM3-210ENST00000530724 ADARB2-AS1A8MUL3 147 aa8.48□□□□□ -1.05
TRIM3-210ENST00000530724 WIPF1O43516 503 aa8.48□□□□□ -1.05
TRIM3-210ENST00000530724 DAZ2Q13117 558 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms