RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PRB4P10163 310 aaPredicted RBP1.64□□□□□ -2.15
C11orf88-204ENST00000529661 UBE2L3P68036 154 aaKnown RBP1.64□□□□□ -2.15
C11orf88-204ENST00000529661 CCL8P80075 99 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 DCDP81605 110 aaKnown RBP1.64□□□□□ -2.15
C11orf88-204ENST00000529661 IQCJQ1A5X6 159 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 S100A7L2Q5SY68 101 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 GDF5OSQ5U4N7 250 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 COMMD6Q7Z4G1 85 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 C4orf33Q8N1A6 199 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 IFI27L1Q96BM0 104 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 SNHG12Q9BXW3 62 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 WFDC10AQ9H1F0 79 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 DPH3P1Q9H4G8 78 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 C10orf71Q711Q0 1435 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 ABCA4P78363 2273 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 PSME4Q14997 1843 aa1.63□□□□□ -2.15
C11orf88-204ENST00000529661 ADGRL2O95490 1459 aa1.63□□□□□ -2.15
C11orf88-204ENST00000529661 TRAV12-3A0A0B4J271 114 aa1.63□□□□□ -2.15
C11orf88-204ENST00000529661 CCKP06307 115 aa1.63□□□□□ -2.15
C11orf88-204ENST00000529661 RBM3P98179 157 aaKnown RBP1.63□□□□□ -2.15
C11orf88-204ENST00000529661 SPATA45Q537H7 98 aa1.63□□□□□ -2.15
C11orf88-204ENST00000529661 SDK1Q7Z5N4 2213 aa1.63□□□□□ -2.15
C11orf88-204ENST00000529661 GAPVD1Q14C86 1478 aa1.63□□□□□ -2.15
C11orf88-204ENST00000529661 FYCO1Q9BQS8 1478 aa1.63□□□□□ -2.15
C11orf88-204ENST00000529661 TEX49A0A1B0GTD5 131 aa1.62□□□□□ -2.15
C11orf88-204ENST00000529661 PRB1P04280 392 aa1.62□□□□□ -2.15
C11orf88-204ENST00000529661 ZNF818PQ6ZRF7 136 aa1.62□□□□□ -2.15
C11orf88-204ENST00000529661 AMELYQ99218 206 aa1.62□□□□□ -2.15
C11orf88-204ENST00000529661 PEAK1Q9H792 1746 aa1.61□□□□□ -2.15
C11orf88-204ENST00000529661 CASKIN1Q8WXD9 1431 aa1.61□□□□□ -2.15
C11orf88-204ENST00000529661 NSD3Q9BZ95 1437 aa1.61□□□□□ -2.15
C11orf88-204ENST00000529661 TRAV23DV6A0A075B6W5 121 aa1.61□□□□□ -2.15
C11orf88-204ENST00000529661 TRAV13-2A0A0B4J235 113 aa1.61□□□□□ -2.15
C11orf88-204ENST00000529661 SIX6O95475 246 aa1.61□□□□□ -2.15
C11orf88-204ENST00000529661 TFF1P04155 84 aa1.61□□□□□ -2.15
C11orf88-204ENST00000529661 SPTSSBQ8NFR3 76 aa1.61□□□□□ -2.15
C11orf88-204ENST00000529661 C10orf82Q8WW14 230 aa1.61□□□□□ -2.15
C11orf88-204ENST00000529661 CYP4F30PQ9H0H9 118 aa1.61□□□□□ -2.15
C11orf88-204ENST00000529661 LOC285556D6RIA3 1793 aa1.61□□□□□ -2.15
C11orf88-204ENST00000529661 MUC6Q6W4X9 2439 aa1.61□□□□□ -2.15
C11orf88-204ENST00000529661 DOCK11Q5JSL3 2073 aa1.6□□□□□ -2.15
C11orf88-204ENST00000529661 PI4KAP42356 2102 aa1.6□□□□□ -2.15
C11orf88-204ENST00000529661 TRBV6-7A0A0A0MS04 114 aa1.6□□□□□ -2.15
C11orf88-204ENST00000529661 IGKV3D-7A0A0C4DH55 119 aa1.6□□□□□ -2.15
C11orf88-204ENST00000529661 IGKV3OR2-268A0A0C4DH90 116 aa1.6□□□□□ -2.15
C11orf88-204ENST00000529661 HCG22E2RYF7 251 aa1.6□□□□□ -2.15
C11orf88-204ENST00000529661 UBE2D1P51668 147 aa1.6□□□□□ -2.15
C11orf88-204ENST00000529661 RPL37AP61513 92 aaKnown RBP1.6□□□□□ -2.15
C11orf88-204ENST00000529661 DPY30Q9C005 99 aa1.6□□□□□ -2.15
C11orf88-204ENST00000529661 AP4S1Q9Y587 144 aa1.6□□□□□ -2.15
C11orf88-204ENST00000529661 SBF2Q86WG5 1849 aa1.59□□□□□ -2.15
C11orf88-204ENST00000529661 LRRC37A3O60309 1634 aa1.59□□□□□ -2.15
C11orf88-204ENST00000529661 BLMP54132 1417 aaPredicted RBP1.59□□□□□ -2.15
C11orf88-204ENST00000529661 SCAPERQ9BY12 1400 aa1.59□□□□□ -2.15
C11orf88-204ENST00000529661 E9PCH4 1651 aa1.59□□□□□ -2.15
C11orf88-204ENST00000529661 MAGI1Q96QZ7 1491 aaPredicted RBP1.59□□□□□ -2.15
C11orf88-204ENST00000529661 RBAKDNA6NC62 111 aa1.59□□□□□ -2.15
C11orf88-204ENST00000529661 LINC00032P0C843 101 aa1.59□□□□□ -2.15
C11orf88-204ENST00000529661 CYP2G1PQ6ZSU1 146 aa1.59□□□□□ -2.15
C11orf88-204ENST00000529661 MED13Q9UHV7 2174 aa1.59□□□□□ -2.16
C11orf88-204ENST00000529661 SIPA1L3O60292 1781 aaPredicted RBP1.59□□□□□ -2.16
C11orf88-204ENST00000529661 PXDNQ92626 1479 aa1.58□□□□□ -2.16
C11orf88-204ENST00000529661 NBDYA0A0U1RRE5 68 aa1.58□□□□□ -2.16
C11orf88-204ENST00000529661 IL9P15248 144 aa1.58□□□□□ -2.16
C11orf88-204ENST00000529661 KRTAP21-3Q3LHN1 58 aa1.58□□□□□ -2.16
C11orf88-204ENST00000529661 MAP2P11137 1827 aaKnown RBP1.58□□□□□ -2.16
C11orf88-204ENST00000529661 BAZ1AQ9NRL2 1556 aaPredicted RBP1.58□□□□□ -2.16
C11orf88-204ENST00000529661 ABCC5O15440 1437 aa1.57□□□□□ -2.16
C11orf88-204ENST00000529661 PRDM2Q13029 1718 aa1.57□□□□□ -2.16
C11orf88-204ENST00000529661 LAMC3Q9Y6N6 1575 aa1.57□□□□□ -2.16
C11orf88-204ENST00000529661 LOC101927531A0A1B0GV80 90 aa1.57□□□□□ -2.16
C11orf88-204ENST00000529661 FXYD4P59646 89 aa1.57□□□□□ -2.16
C11orf88-204ENST00000529661 UBA52P62987 128 aaKnown RBP1.57□□□□□ -2.16
C11orf88-204ENST00000529661 XAF1Q6GPH4 301 aa1.57□□□□□ -2.16
C11orf88-204ENST00000529661 MYOZ3Q8TDC0 251 aa1.57□□□□□ -2.16
C11orf88-204ENST00000529661 OBSCN-AS1Q96MR7 158 aa1.57□□□□□ -2.16
C11orf88-204ENST00000529661 LINC00312Q9Y6C7 94 aa1.57□□□□□ -2.16
C11orf88-204ENST00000529661 V9GYS6 101 aa1.57□□□□□ -2.16
C11orf88-204ENST00000529661 PPIP5K1Q6PFW1 1433 aa1.57□□□□□ -2.16
C11orf88-204ENST00000529661 ASCC3Q8N3C0 2202 aaKnown RBP1.56□□□□□ -2.16
C11orf88-204ENST00000529661 IGKV2-40A0A087WW87 121 aaPredicted RBP1.56□□□□□ -2.16
C11orf88-204ENST00000529661 TRBV7-1A0A0A6YYK4 115 aa1.56□□□□□ -2.16
C11orf88-204ENST00000529661 IGKV2D-40P01614 121 aaPredicted RBP1.56□□□□□ -2.16
C11orf88-204ENST00000529661 FXYD3Q14802 87 aa1.56□□□□□ -2.16
C11orf88-204ENST00000529661 PPP1R1CQ8WVI7 109 aa1.56□□□□□ -2.16
C11orf88-204ENST00000529661 RGPD4Q7Z3J3 1758 aa1.56□□□□□ -2.16
C11orf88-204ENST00000529661 MED13LQ71F56 2210 aa1.55□□□□□ -2.16
C11orf88-204ENST00000529661 IGKV2-29A2NJV5 120 aaPredicted RBP1.55□□□□□ -2.16
C11orf88-204ENST00000529661 MT-ATP8P03928 68 aa1.55□□□□□ -2.16
C11orf88-204ENST00000529661 CCL3L1P16619 93 aa1.55□□□□□ -2.16
C11orf88-204ENST00000529661 SNCAP37840 140 aa1.55□□□□□ -2.16
C11orf88-204ENST00000529661 DEFB119Q8N690 84 aa1.55□□□□□ -2.16
C11orf88-204ENST00000529661 C5orf56Q8N8D9 126 aa1.55□□□□□ -2.16
C11orf88-204ENST00000529661 Q9H521 79 aa1.55□□□□□ -2.16
C11orf88-204ENST00000529661 LINC00474Q9P2X8 69 aa1.55□□□□□ -2.16
C11orf88-204ENST00000529661 CACNA1BQ00975 2339 aa1.55□□□□□ -2.16
C11orf88-204ENST00000529661 KDM5AP29375 1690 aaKnown RBP1.55□□□□□ -2.16
C11orf88-204ENST00000529661 CLPSL1A2RUU4 121 aa1.54□□□□□ -2.16
C11orf88-204ENST00000529661 NAP1L6A6NFF2 107 aa1.54□□□□□ -2.16
C11orf88-204ENST00000529661 KRTDAPP60985 99 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms