RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 RPL23P62829 140 aaKnown RBP8.22□□□□□ -1.09
USH1C-208ENST00000529563 TWIST1Q15672 202 aa8.22□□□□□ -1.09
USH1C-208ENST00000529563 OR10J3Q5JRS4 329 aa8.22□□□□□ -1.09
USH1C-208ENST00000529563 LYZL1Q6UWQ5 148 aa8.22□□□□□ -1.09
USH1C-208ENST00000529563 COMMD7Q86VX2 200 aa8.22□□□□□ -1.09
USH1C-208ENST00000529563 IGHV3-38A0A0C4DH36 116 aa8.21□□□□□ -1.1
USH1C-208ENST00000529563 TRBV6-4A0A1B0GX49 114 aa8.21□□□□□ -1.1
USH1C-208ENST00000529563 F8W036 122 aa8.21□□□□□ -1.1
USH1C-208ENST00000529563 MGPP08493 103 aa8.21□□□□□ -1.1
USH1C-208ENST00000529563 PNRC1Q12796 327 aaPredicted RBP8.21□□□□□ -1.1
USH1C-208ENST00000529563 CT83Q5H943 113 aa8.21□□□□□ -1.1
USH1C-208ENST00000529563 ISOC2Q96AB3 205 aa8.21□□□□□ -1.1
USH1C-208ENST00000529563 PGLYRP4Q96LB8 373 aa8.21□□□□□ -1.1
USH1C-208ENST00000529563 SSBP4Q9BWG4 385 aaPredicted RBP8.21□□□□□ -1.1
USH1C-208ENST00000529563 Q9HAA7 133 aa8.21□□□□□ -1.1
USH1C-208ENST00000529563 LOC100131303A0A0U1RQF7 123 aa8.2□□□□□ -1.1
USH1C-208ENST00000529563 PPP1R2P9O14990 202 aa8.2□□□□□ -1.1
USH1C-208ENST00000529563 IGLC6P0CF74 106 aa8.2□□□□□ -1.1
USH1C-208ENST00000529563 GATA1P15976 413 aaPredicted RBP8.2□□□□□ -1.1
USH1C-208ENST00000529563 C14orf178Q8N769 122 aaPredicted RBP8.2□□□□□ -1.1
USH1C-208ENST00000529563 TSKUQ8WUA8 353 aa8.2□□□□□ -1.1
USH1C-208ENST00000529563 JPT2Q9H910 190 aa8.2□□□□□ -1.1
USH1C-208ENST00000529563 H7C1H1 209 aa8.19□□□□□ -1.1
USH1C-208ENST00000529563 MT-ND4LP03901 98 aa8.19□□□□□ -1.1
USH1C-208ENST00000529563 NTF3P20783 257 aa8.19□□□□□ -1.1
USH1C-208ENST00000529563 HAMPP81172 84 aa8.19□□□□□ -1.1
USH1C-208ENST00000529563 WDR73Q6P4I2 378 aa8.19□□□□□ -1.1
USH1C-208ENST00000529563 Q6ZSN1 163 aa8.19□□□□□ -1.1
USH1C-208ENST00000529563 SLC25A29Q8N8R3 303 aa8.19□□□□□ -1.1
USH1C-208ENST00000529563 NTN5Q8WTR8 489 aaPredicted RBP8.19□□□□□ -1.1
USH1C-208ENST00000529563 SAMD10Q9BYL1 202 aa8.19□□□□□ -1.1
USH1C-208ENST00000529563 HIGD1CA8MV81 97 aa8.18□□□□□ -1.1
USH1C-208ENST00000529563 IGHV3-30P01768 117 aa8.18□□□□□ -1.1
USH1C-208ENST00000529563 IGHV3-33P01772 117 aa8.18□□□□□ -1.1
USH1C-208ENST00000529563 IGHV3-30-3P0DP02 117 aa8.18□□□□□ -1.1
USH1C-208ENST00000529563 IGHV3-30-5P0DP03 117 aa8.18□□□□□ -1.1
USH1C-208ENST00000529563 RAB4BP61018 213 aa8.18□□□□□ -1.1
USH1C-208ENST00000529563 RPL36AP83881 106 aaKnown RBP8.18□□□□□ -1.1
USH1C-208ENST00000529563 RIGQ13278 110 aa8.18□□□□□ -1.1
USH1C-208ENST00000529563 RPL36ALQ969Q0 106 aaKnown RBP8.18□□□□□ -1.1
USH1C-208ENST00000529563 GFRA4Q9GZZ7 299 aa8.18□□□□□ -1.1
USH1C-208ENST00000529563 NAT8BQ9UHF3 227 aa8.18□□□□□ -1.1
USH1C-208ENST00000529563 A0A1B0GUT8 65 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 FAM231BA6NCW3 169 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 GAGE12JA6NER3 117 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 J3QL48 77 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 CTRLP40313 264 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 GAGE1Q13065 139 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 GAGE4Q13068 117 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 GAGE5Q13069 117 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 GAGE13Q4V321 117 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 LINC01556Q5JQF7 62 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 TMEM70Q9BUB7 260 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 DPH3P1Q9H4G8 78 aa8.17□□□□□ -1.1
USH1C-208ENST00000529563 TMEM218A2RU14 115 aa8.16□□□□□ -1.1
USH1C-208ENST00000529563 TIRAPP58753 221 aa8.16□□□□□ -1.1
USH1C-208ENST00000529563 ATP6V0E2Q8NHE4 81 aa8.16□□□□□ -1.1
USH1C-208ENST00000529563 TM2D2Q9BX73 214 aa8.16□□□□□ -1.1
USH1C-208ENST00000529563 V9GYV3 84 aa8.16□□□□□ -1.1
USH1C-208ENST00000529563 TRBV10-1A0A0K0K1A3 114 aa8.15□□□□□ -1.1
USH1C-208ENST00000529563 LINC00862A6NCI5 91 aa8.15□□□□□ -1.1
USH1C-208ENST00000529563 IBA57-AS1B1ANH7 110 aa8.15□□□□□ -1.1
USH1C-208ENST00000529563 S100A8P05109 93 aa8.15□□□□□ -1.1
USH1C-208ENST00000529563 Q8N814 137 aa8.15□□□□□ -1.1
USH1C-208ENST00000529563 GTSF1Q8WW33 167 aa8.15□□□□□ -1.1
USH1C-208ENST00000529563 ANAPC16Q96DE5 110 aa8.15□□□□□ -1.1
USH1C-208ENST00000529563 LELP1Q5T871 98 aa8.14□□□□□ -1.11
USH1C-208ENST00000529563 KCNIP4Q6PIL6 250 aa8.14□□□□□ -1.11
USH1C-208ENST00000529563 SEC11CQ9BY50 192 aa8.14□□□□□ -1.11
USH1C-208ENST00000529563 GTSF1LQ9H1H1 148 aa8.14□□□□□ -1.11
USH1C-208ENST00000529563 HERC1Q15751 4861 aa8.14□□□□□ -1.11
USH1C-208ENST00000529563 TRBV7-3A0A075B6L6 115 aa8.13□□□□□ -1.11
USH1C-208ENST00000529563 LRCOL1A6NCL2 159 aa8.13□□□□□ -1.11
USH1C-208ENST00000529563 FOXA3P55318 350 aaPredicted RBP8.13□□□□□ -1.11
USH1C-208ENST00000529563 NUP35Q8NFH5 326 aa8.13□□□□□ -1.11
USH1C-208ENST00000529563 SRRM2Q9UQ35 2752 aaKnown RBP8.13□□□□□ -1.11
USH1C-208ENST00000529563 A0A087WWC5 75 aa8.12□□□□□ -1.11
USH1C-208ENST00000529563 A0A1B0GW15 77 aa8.12□□□□□ -1.11
USH1C-208ENST00000529563 PLA2G1BP04054 148 aaKnown RBP8.12□□□□□ -1.11
USH1C-208ENST00000529563 S100PP25815 95 aa8.12□□□□□ -1.11
USH1C-208ENST00000529563 CAMPP49913 170 aa8.12□□□□□ -1.11
USH1C-208ENST00000529563 UFSP1Q6NVU6 142 aa8.12□□□□□ -1.11
USH1C-208ENST00000529563 RASL11AQ6T310 242 aa8.12□□□□□ -1.11
USH1C-208ENST00000529563 CNFNQ9BYD5 112 aa8.12□□□□□ -1.11
USH1C-208ENST00000529563 URGCP-MRPS24S4R325 110 aa8.12□□□□□ -1.11
USH1C-208ENST00000529563 FLG2Q5D862 2391 aaPredicted RBP8.12□□□□□ -1.11
USH1C-208ENST00000529563 SMIM27A0A1W2PRY6 76 aa8.11□□□□□ -1.11
USH1C-208ENST00000529563 LAGE3Q14657 143 aa8.11□□□□□ -1.11
USH1C-208ENST00000529563 DNAJC30Q96LL9 226 aa8.11□□□□□ -1.11
USH1C-208ENST00000529563 CTDSP1Q9GZU7 261 aa8.11□□□□□ -1.11
USH1C-208ENST00000529563 TRAV8-3A0A0A6YYJ7 113 aa8.1□□□□□ -1.11
USH1C-208ENST00000529563 LECT2O14960 151 aa8.1□□□□□ -1.11
USH1C-208ENST00000529563 TMEM97Q5BJF2 176 aa8.1□□□□□ -1.11
USH1C-208ENST00000529563 SUMO4Q6EEV6 95 aa8.1□□□□□ -1.11
USH1C-208ENST00000529563 MRPL54Q6P161 138 aaKnown RBP8.1□□□□□ -1.11
USH1C-208ENST00000529563 NIT2Q9NQR4 276 aa8.1□□□□□ -1.11
USH1C-208ENST00000529563 UBR4Q5T4S7 5183 aa8.09□□□□□ -1.11
USH1C-208ENST00000529563 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.09□□□□□ -1.11
USH1C-208ENST00000529563 APOC3P02656 99 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms