RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 TP53TG3Q9ULZ0 132 aa9.16□□□□□ -0.94
TRIM3-208ENST00000529058 TRAV8-6A0A0B4J262 113 aa9.15□□□□□ -0.94
TRIM3-208ENST00000529058 KRTAP9-6A0A140TA67 174 aa9.15□□□□□ -0.94
TRIM3-208ENST00000529058 C7orf77A4D0Y5 90 aa9.15□□□□□ -0.94
TRIM3-208ENST00000529058 PPP1R2P9O14990 202 aa9.15□□□□□ -0.94
TRIM3-208ENST00000529058 GATCO43716 136 aaKnown RBP9.15□□□□□ -0.94
TRIM3-208ENST00000529058 MT-ND4LP03901 98 aa9.15□□□□□ -0.94
TRIM3-208ENST00000529058 NUDT10Q8NFP7 164 aa9.15□□□□□ -0.94
TRIM3-208ENST00000529058 NUDT11Q96G61 164 aa9.15□□□□□ -0.94
TRIM3-208ENST00000529058 RPP21Q9H633 154 aaKnown RBP9.15□□□□□ -0.94
TRIM3-208ENST00000529058 RPS10P5Q9NQ39 176 aa9.15□□□□□ -0.94
TRIM3-208ENST00000529058 NAGKQ9UJ70 344 aa9.15□□□□□ -0.94
TRIM3-208ENST00000529058 OR10J3Q5JRS4 329 aa9.14□□□□□ -0.95
TRIM3-208ENST00000529058 Q6ZQT7 251 aa9.14□□□□□ -0.95
TRIM3-208ENST00000529058 OR2D3Q8NGH3 330 aa9.14□□□□□ -0.95
TRIM3-208ENST00000529058 A0A087WWC5 75 aa9.13□□□□□ -0.95
TRIM3-208ENST00000529058 RPL19P84098 196 aaKnown RBP9.13□□□□□ -0.95
TRIM3-208ENST00000529058 LINC01559Q495D7 138 aa9.13□□□□□ -0.95
TRIM3-208ENST00000529058 MUC21Q5SSG8 566 aa9.13□□□□□ -0.95
TRIM3-208ENST00000529058 ATRAIDQ6UW56 229 aa9.13□□□□□ -0.95
TRIM3-208ENST00000529058 BAALCQ8WXS3 180 aa9.13□□□□□ -0.95
TRIM3-208ENST00000529058 ANAPC16Q96DE5 110 aa9.13□□□□□ -0.95
TRIM3-208ENST00000529058 CTDSP1Q9GZU7 261 aa9.13□□□□□ -0.95
TRIM3-208ENST00000529058 C11orf21Q9P2W6 132 aa9.13□□□□□ -0.95
TRIM3-208ENST00000529058 V9GYV3 84 aa9.13□□□□□ -0.95
TRIM3-208ENST00000529058 TMSB15BA0A087X1C1 80 aa9.12□□□□□ -0.95
TRIM3-208ENST00000529058 LOC100131303A0A0U1RQF7 123 aa9.12□□□□□ -0.95
TRIM3-208ENST00000529058 CT83Q5H943 113 aa9.12□□□□□ -0.95
TRIM3-208ENST00000529058 Q8N976 141 aa9.12□□□□□ -0.95
TRIM3-208ENST00000529058 IGHV1OR15-1A0A075B7D0 117 aa9.11□□□□□ -0.95
TRIM3-208ENST00000529058 TRAV8-3A0A0A6YYJ7 113 aa9.11□□□□□ -0.95
TRIM3-208ENST00000529058 XKRY2A2RUG3 117 aa9.11□□□□□ -0.95
TRIM3-208ENST00000529058 RPS20P60866 119 aaKnown RBP9.11□□□□□ -0.95
TRIM3-208ENST00000529058 FAM159AQ6UWV7 190 aa9.11□□□□□ -0.95
TRIM3-208ENST00000529058 IGKV3D-20A0A0C4DH25 116 aa9.1□□□□□ -0.95
TRIM3-208ENST00000529058 A8MWL6 223 aa9.1□□□□□ -0.95
TRIM3-208ENST00000529058 KCNS1Q96KK3 526 aa9.1□□□□□ -0.95
TRIM3-208ENST00000529058 GRIFINA4D1Z8 144 aa9.09□□□□□ -0.95
TRIM3-208ENST00000529058 TYMSP04818 313 aa9.09□□□□□ -0.95
TRIM3-208ENST00000529058 CXCL1P09341 107 aa9.09□□□□□ -0.95
TRIM3-208ENST00000529058 GZMBP10144 247 aa9.09□□□□□ -0.95
TRIM3-208ENST00000529058 TSKUQ8WUA8 353 aa9.09□□□□□ -0.95
TRIM3-208ENST00000529058 RASL10AQ92737 203 aa9.09□□□□□ -0.95
TRIM3-208ENST00000529058 TMEM242Q9NWH2 141 aa9.09□□□□□ -0.95
TRIM3-208ENST00000529058 IL36BQ9NZH7 164 aa9.09□□□□□ -0.95
TRIM3-208ENST00000529058 COX11Q9Y6N1 276 aa9.09□□□□□ -0.95
TRIM3-208ENST00000529058 TRGV11A0A075B6L2 103 aa9.08□□□□□ -0.96
TRIM3-208ENST00000529058 SCO1O75880 301 aa9.08□□□□□ -0.96
TRIM3-208ENST00000529058 LELP1Q5T871 98 aa9.08□□□□□ -0.96
TRIM3-208ENST00000529058 CBLN2Q8IUK8 224 aa9.08□□□□□ -0.96
TRIM3-208ENST00000529058 ATP6V0E2Q8NHE4 81 aa9.08□□□□□ -0.96
TRIM3-208ENST00000529058 TRAV4A0A0B4J268 109 aa9.07□□□□□ -0.96
TRIM3-208ENST00000529058 SMIM27A0A1W2PRY6 76 aa9.07□□□□□ -0.96
TRIM3-208ENST00000529058 S100PP25815 95 aa9.07□□□□□ -0.96
TRIM3-208ENST00000529058 S100A4P26447 101 aaKnown RBP9.07□□□□□ -0.96
TRIM3-208ENST00000529058 KCNIP4Q6PIL6 250 aa9.07□□□□□ -0.96
TRIM3-208ENST00000529058 Q8N3U1 123 aa9.07□□□□□ -0.96
TRIM3-208ENST00000529058 IMMP2LQ96T52 175 aa9.07□□□□□ -0.96
TRIM3-208ENST00000529058 TPPP3Q9BW30 176 aa9.07□□□□□ -0.96
TRIM3-208ENST00000529058 GFRA4Q9GZZ7 299 aa9.07□□□□□ -0.96
TRIM3-208ENST00000529058 SMCO4Q9NRQ5 59 aa9.07□□□□□ -0.96
TRIM3-208ENST00000529058 HIGD1CA8MV81 97 aa9.06□□□□□ -0.96
TRIM3-208ENST00000529058 H3BVH4 76 aa9.06□□□□□ -0.96
TRIM3-208ENST00000529058 GNRH2O43555 120 aa9.06□□□□□ -0.96
TRIM3-208ENST00000529058 IGLC6P0CF74 106 aa9.06□□□□□ -0.96
TRIM3-208ENST00000529058 ODF1Q14990 250 aa9.06□□□□□ -0.96
TRIM3-208ENST00000529058 FER1L6-AS1Q8NA97 138 aa9.06□□□□□ -0.96
TRIM3-208ENST00000529058 OR4C5Q8NGB2 326 aa9.06□□□□□ -0.96
TRIM3-208ENST00000529058 GTSF1Q8WW33 167 aa9.06□□□□□ -0.96
TRIM3-208ENST00000529058 NAT8BQ9UHF3 227 aa9.06□□□□□ -0.96
TRIM3-208ENST00000529058 URGCP-MRPS24S4R325 110 aa9.06□□□□□ -0.96
TRIM3-208ENST00000529058 IGHV3-16A0A0C4DH30 117 aa9.05□□□□□ -0.96
TRIM3-208ENST00000529058 FAM231BA6NCW3 169 aa9.05□□□□□ -0.96
TRIM3-208ENST00000529058 CTRLP40313 264 aa9.05□□□□□ -0.96
TRIM3-208ENST00000529058 DNLZQ5SXM8 178 aa9.05□□□□□ -0.96
TRIM3-208ENST00000529058 PGLYRP4Q96LB8 373 aa9.05□□□□□ -0.96
TRIM3-208ENST00000529058 SPXQ9BT56 116 aa9.05□□□□□ -0.96
TRIM3-208ENST00000529058 DPH3P1Q9H4G8 78 aa9.05□□□□□ -0.96
TRIM3-208ENST00000529058 RNASE3P12724 160 aaKnown RBP9.04□□□□□ -0.96
TRIM3-208ENST00000529058 GATA1P15976 413 aaPredicted RBP9.04□□□□□ -0.96
TRIM3-208ENST00000529058 NUP35Q8NFH5 326 aa9.04□□□□□ -0.96
TRIM3-208ENST00000529058 BORCS7Q96B45 105 aa9.04□□□□□ -0.96
TRIM3-208ENST00000529058 RMI2Q96E14 147 aa9.04□□□□□ -0.96
TRIM3-208ENST00000529058 LPAP08519 4548 aa9.03□□□□□ -0.96
TRIM3-208ENST00000529058 TRAV9-1A0A075B6T8 112 aa9.03□□□□□ -0.96
TRIM3-208ENST00000529058 SNAI2O43623 268 aa9.03□□□□□ -0.96
TRIM3-208ENST00000529058 OR5AL1P0C617 328 aa9.03□□□□□ -0.96
TRIM3-208ENST00000529058 ARMS2P0C7Q2 107 aa9.03□□□□□ -0.96
TRIM3-208ENST00000529058 LYZL1Q6UWQ5 148 aa9.03□□□□□ -0.96
TRIM3-208ENST00000529058 DAZ4Q86SG3 579 aaKnown RBP9.03□□□□□ -0.96
TRIM3-208ENST00000529058 BTF3L4Q96K17 158 aa9.03□□□□□ -0.96
TRIM3-208ENST00000529058 C9orf85Q96MD7 179 aa9.03□□□□□ -0.96
TRIM3-208ENST00000529058 GTSF1LQ9H1H1 148 aa9.03□□□□□ -0.96
TRIM3-208ENST00000529058 DAZ3Q9NR90 486 aaKnown RBP9.03□□□□□ -0.96
TRIM3-208ENST00000529058 TMA7Q9Y2S6 64 aaKnown RBP9.03□□□□□ -0.96
TRIM3-208ENST00000529058 MUC21A0A0G2JKD1 596 aa9.02□□□□□ -0.97
TRIM3-208ENST00000529058 MUC21A0A140T8X8 626 aa9.02□□□□□ -0.97
TRIM3-208ENST00000529058 F2Z2F3 143 aa9.02□□□□□ -0.97
TRIM3-208ENST00000529058 FOXA3P55318 350 aaPredicted RBP9.02□□□□□ -0.97
TRIM3-208ENST00000529058 MRPL54Q6P161 138 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 232.2 ms