RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 S100PP25815 95 aa9.96□□□□□ -0.82
UBXN1-209ENST00000528907 RPL36AP83881 106 aaKnown RBP9.96□□□□□ -0.82
UBXN1-209ENST00000528907 MRPL54Q6P161 138 aaKnown RBP9.96□□□□□ -0.82
UBXN1-209ENST00000528907 LINC00476Q8WZB0 136 aa9.96□□□□□ -0.82
UBXN1-209ENST00000528907 RPL36ALQ969Q0 106 aaKnown RBP9.96□□□□□ -0.82
UBXN1-209ENST00000528907 CCL18P55774 89 aa9.95□□□□□ -0.82
UBXN1-209ENST00000528907 FAM104BQ5XKR9 115 aa9.95□□□□□ -0.82
UBXN1-209ENST00000528907 LYPD5Q6UWN5 251 aa9.95□□□□□ -0.82
UBXN1-209ENST00000528907 NEXN-AS1Q8NBZ9 246 aa9.95□□□□□ -0.82
UBXN1-209ENST00000528907 MRAP2Q96G30 205 aa9.95□□□□□ -0.82
UBXN1-209ENST00000528907 Q9UF83 564 aa9.95□□□□□ -0.82
UBXN1-209ENST00000528907 CAMPP49913 170 aa9.94□□□□□ -0.82
UBXN1-209ENST00000528907 UBE2D3P61077 147 aa9.94□□□□□ -0.82
UBXN1-209ENST00000528907 UBE2D2P62837 147 aa9.94□□□□□ -0.82
UBXN1-209ENST00000528907 ESRGQ1W209 222 aa9.94□□□□□ -0.82
UBXN1-209ENST00000528907 AMN1Q8IY45 258 aa9.94□□□□□ -0.82
UBXN1-209ENST00000528907 UPK3BQ9BT76 320 aa9.94□□□□□ -0.82
UBXN1-209ENST00000528907 NIT2Q9NQR4 276 aa9.94□□□□□ -0.82
UBXN1-209ENST00000528907 GAGE12JA6NER3 117 aa9.93□□□□□ -0.82
UBXN1-209ENST00000528907 GAGE1Q13065 139 aa9.93□□□□□ -0.82
UBXN1-209ENST00000528907 GAGE4Q13068 117 aa9.93□□□□□ -0.82
UBXN1-209ENST00000528907 GAGE5Q13069 117 aa9.93□□□□□ -0.82
UBXN1-209ENST00000528907 COX19Q49B96 90 aa9.93□□□□□ -0.82
UBXN1-209ENST00000528907 GAGE13Q4V321 117 aa9.93□□□□□ -0.82
UBXN1-209ENST00000528907 ATP6V0E2Q8NHE4 81 aa9.93□□□□□ -0.82
UBXN1-209ENST00000528907 ZNRF2Q8NHG8 242 aa9.93□□□□□ -0.82
UBXN1-209ENST00000528907 HYDINQ4G0P3 5121 aa9.92□□□□□ -0.82
UBXN1-209ENST00000528907 TRBV6-5A0A0K0K1A5 114 aa9.92□□□□□ -0.82
UBXN1-209ENST00000528907 PPP1R17O96001 155 aa9.92□□□□□ -0.82
UBXN1-209ENST00000528907 ATRAIDQ6UW56 229 aa9.92□□□□□ -0.82
UBXN1-209ENST00000528907 GTSF1LQ9H1H1 148 aa9.92□□□□□ -0.82
UBXN1-209ENST00000528907 MRPS16Q9Y3D3 137 aaKnown RBP9.92□□□□□ -0.82
UBXN1-209ENST00000528907 LINC00588Q9Y4M8 146 aa9.92□□□□□ -0.82
UBXN1-209ENST00000528907 TRBV24-1A0A075B6N3 115 aa9.91□□□□□ -0.82
UBXN1-209ENST00000528907 ELOBQ15370 118 aa9.91□□□□□ -0.82
UBXN1-209ENST00000528907 MRPL51Q4U2R6 128 aaKnown RBP9.91□□□□□ -0.82
UBXN1-209ENST00000528907 DAZ4Q86SG3 579 aaKnown RBP9.91□□□□□ -0.82
UBXN1-209ENST00000528907 DAZ3Q9NR90 486 aaKnown RBP9.91□□□□□ -0.82
UBXN1-209ENST00000528907 TNFRSF18Q9Y5U5 241 aa9.91□□□□□ -0.82
UBXN1-209ENST00000528907 TRAV26-2A0A0B4J265 109 aa9.9□□□□□ -0.82
UBXN1-209ENST00000528907 PPBPP02775 128 aa9.9□□□□□ -0.82
UBXN1-209ENST00000528907 TMEM97Q5BJF2 176 aa9.9□□□□□ -0.82
UBXN1-209ENST00000528907 TMEM136Q6ZRR5 245 aa9.9□□□□□ -0.82
UBXN1-209ENST00000528907 YPEL4Q96NS1 127 aa9.9□□□□□ -0.82
UBXN1-209ENST00000528907 URGCP-MRPS24S4R325 110 aa9.9□□□□□ -0.82
UBXN1-209ENST00000528907 LELP1Q5T871 98 aa9.89□□□□□ -0.83
UBXN1-209ENST00000528907 UBE2DNLQ8IWF7 75 aa9.89□□□□□ -0.83
UBXN1-209ENST00000528907 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.89□□□□□ -0.83
UBXN1-209ENST00000528907 GNB1LQ9BYB4 327 aa9.89□□□□□ -0.83
UBXN1-209ENST00000528907 ALMS1Q8TCU4 4167 aa9.88□□□□□ -0.83
UBXN1-209ENST00000528907 PHOX2AO14813 284 aa9.88□□□□□ -0.83
UBXN1-209ENST00000528907 LY6G6CO95867 125 aa9.88□□□□□ -0.83
UBXN1-209ENST00000528907 HLA-DQA1P01909 254 aa9.88□□□□□ -0.83
UBXN1-209ENST00000528907 OR10J3Q5JRS4 329 aa9.88□□□□□ -0.83
UBXN1-209ENST00000528907 NRACQ8N912 160 aa9.88□□□□□ -0.83
UBXN1-209ENST00000528907 RPL39LQ96EH5 51 aaKnown RBP9.88□□□□□ -0.83
UBXN1-209ENST00000528907 SMCO4Q9NRQ5 59 aa9.88□□□□□ -0.83
UBXN1-209ENST00000528907 GAS8-AS1O95177 125 aa9.87□□□□□ -0.83
UBXN1-209ENST00000528907 MT-ND6P03923 174 aa9.87□□□□□ -0.83
UBXN1-209ENST00000528907 CKS2P33552 79 aa9.87□□□□□ -0.83
UBXN1-209ENST00000528907 RPL32P62910 135 aaKnown RBP9.87□□□□□ -0.83
UBXN1-209ENST00000528907 LAMTOR2Q9Y2Q5 125 aa9.87□□□□□ -0.83
UBXN1-209ENST00000528907 RPS10P46783 165 aaKnown RBP9.86□□□□□ -0.83
UBXN1-209ENST00000528907 POLR2KP53803 58 aaKnown RBP9.86□□□□□ -0.83
UBXN1-209ENST00000528907 ORMDL3Q8N138 153 aa9.86□□□□□ -0.83
UBXN1-209ENST00000528907 C20orf78Q9BR46 151 aa9.86□□□□□ -0.83
UBXN1-209ENST00000528907 ST20Q9HBF5 79 aa9.86□□□□□ -0.83
UBXN1-209ENST00000528907 VPS13DQ5THJ4 4388 aa9.86□□□□□ -0.83
UBXN1-209ENST00000528907 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
UBXN1-209ENST00000528907 TGIF2-C20orf24A0A0A6YYL0 155 aa9.85□□□□□ -0.83
UBXN1-209ENST00000528907 TRBV27A0A0K0K1C4 114 aa9.85□□□□□ -0.83
UBXN1-209ENST00000528907 SDHAF1A6NFY7 115 aa9.85□□□□□ -0.83
UBXN1-209ENST00000528907 PRSS47A8MTI9 375 aa9.85□□□□□ -0.83
UBXN1-209ENST00000528907 D6R8Y8 96 aa9.85□□□□□ -0.83
UBXN1-209ENST00000528907 K7EP13 123 aa9.85□□□□□ -0.83
UBXN1-209ENST00000528907 NCR2O95944 276 aa9.85□□□□□ -0.83
UBXN1-209ENST00000528907 Q9H8V8 135 aa9.85□□□□□ -0.83
UBXN1-209ENST00000528907 TRAV8-6A0A0B4J262 113 aa9.84□□□□□ -0.83
UBXN1-209ENST00000528907 SMKR1H3BMG3 65 aa9.84□□□□□ -0.83
UBXN1-209ENST00000528907 TNFRSF6BO95407 300 aa9.84□□□□□ -0.83
UBXN1-209ENST00000528907 S100A1P23297 94 aa9.84□□□□□ -0.83
UBXN1-209ENST00000528907 SUMO2P61956 95 aaKnown RBP9.84□□□□□ -0.83
UBXN1-209ENST00000528907 IQCJQ1A5X6 159 aa9.84□□□□□ -0.83
UBXN1-209ENST00000528907 NTM-AS1Q6ZSK4 140 aa9.84□□□□□ -0.83
UBXN1-209ENST00000528907 TMEM70Q9BUB7 260 aa9.84□□□□□ -0.83
UBXN1-209ENST00000528907 IGHV3-38A0A0C4DH36 116 aa9.83□□□□□ -0.84
UBXN1-209ENST00000528907 I3L3M4 83 aa9.83□□□□□ -0.84
UBXN1-209ENST00000528907 SIVA1O15304 175 aa9.83□□□□□ -0.84
UBXN1-209ENST00000528907 APCSP02743 223 aa9.83□□□□□ -0.84
UBXN1-209ENST00000528907 DNAH10OSP0CZ25 163 aa9.83□□□□□ -0.84
UBXN1-209ENST00000528907 CBLN2Q8IUK8 224 aa9.83□□□□□ -0.84
UBXN1-209ENST00000528907 HERC2O95714 4834 aa9.82□□□□□ -0.84
UBXN1-209ENST00000528907 VCYO14598 125 aa9.82□□□□□ -0.84
UBXN1-209ENST00000528907 COTL1Q14019 142 aa9.82□□□□□ -0.84
UBXN1-209ENST00000528907 WFDC10BQ8IUB3 73 aa9.82□□□□□ -0.84
UBXN1-209ENST00000528907 PRELID3AQ96N28 172 aa9.82□□□□□ -0.84
UBXN1-209ENST00000528907 CHCHD7Q9BUK0 85 aa9.82□□□□□ -0.84
UBXN1-209ENST00000528907 PCLOQ9Y6V0 5065 aa9.81□□□□□ -0.84
UBXN1-209ENST00000528907 TRBV25-1A0A075B6N4 114 aa9.81□□□□□ -0.84
UBXN1-209ENST00000528907 IGHV1-24A0A0C4DH33 117 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms