RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 RPL36AP83881 106 aaKnown RBP4.37□□□□□ -1.71
MACF1-228ENST00000528611 DAZ4Q86SG3 579 aaKnown RBP4.37□□□□□ -1.71
MACF1-228ENST00000528611 C14orf178Q8N769 122 aaPredicted RBP4.37□□□□□ -1.71
MACF1-228ENST00000528611 SLC25A29Q8N8R3 303 aa4.37□□□□□ -1.71
MACF1-228ENST00000528611 RPL36ALQ969Q0 106 aaKnown RBP4.37□□□□□ -1.71
MACF1-228ENST00000528611 ZNF479Q96JC4 524 aa4.37□□□□□ -1.71
MACF1-228ENST00000528611 YPEL4Q96NS1 127 aa4.37□□□□□ -1.71
MACF1-228ENST00000528611 C20orf78Q9BR46 151 aa4.37□□□□□ -1.71
MACF1-228ENST00000528611 DAZ3Q9NR90 486 aaKnown RBP4.37□□□□□ -1.71
MACF1-228ENST00000528611 MSRB1Q9NZV6 116 aa4.37□□□□□ -1.71
MACF1-228ENST00000528611 F5H697 171 aa4.36□□□□□ -1.71
MACF1-228ENST00000528611 F5H768 121 aa4.36□□□□□ -1.71
MACF1-228ENST00000528611 NCR2O95944 276 aa4.36□□□□□ -1.71
MACF1-228ENST00000528611 CAMPP49913 170 aa4.36□□□□□ -1.71
MACF1-228ENST00000528611 NANOS2P60321 138 aaKnown RBP4.36□□□□□ -1.71
MACF1-228ENST00000528611 PKIAP61925 76 aa4.36□□□□□ -1.71
MACF1-228ENST00000528611 ZNF56Q15929 161 aa4.36□□□□□ -1.71
MACF1-228ENST00000528611 FAM74A4Q5TZK3 123 aa4.36□□□□□ -1.71
MACF1-228ENST00000528611 NEGR1Q7Z3B1 354 aa4.36□□□□□ -1.71
MACF1-228ENST00000528611 ORMDL3Q8N138 153 aa4.36□□□□□ -1.71
MACF1-228ENST00000528611 GTSF1LQ9H1H1 148 aa4.36□□□□□ -1.71
MACF1-228ENST00000528611 ICOSQ9Y6W8 199 aa4.36□□□□□ -1.71
MACF1-228ENST00000528611 HUWE1Q7Z6Z7 4374 aaKnown RBP4.36□□□□□ -1.71
MACF1-228ENST00000528611 A0A087WWL8 130 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 TRBV27A0A0K0K1C4 114 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 LINC00694P0DN24 101 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 BTF3P20290 206 aaKnown RBP4.35□□□□□ -1.71
MACF1-228ENST00000528611 HOXA5P20719 270 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 SRIP30626 198 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 CKS2P33552 79 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 SMAGPQ0VAQ4 97 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 MRPL54Q6P161 138 aaKnown RBP4.35□□□□□ -1.71
MACF1-228ENST00000528611 ATRAIDQ6UW56 229 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 TMEM136Q6ZRR5 245 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 RNF185Q96GF1 192 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 VSIG2Q96IQ7 327 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 SAMD10Q9BYL1 202 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 TNFRSF18Q9Y5U5 241 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 URGCP-MRPS24S4R325 110 aa4.35□□□□□ -1.71
MACF1-228ENST00000528611 NACAE9PAV3 2078 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 COLCA2A8K830 154 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 H7C423 109 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 VCYO14598 125 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 APCSP02743 223 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 P0DMU3 169 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 FAM231AP0DMU4 169 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 FAM231CP0DMU5 169 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 POLR2KP53803 58 aaKnown RBP4.34□□□□□ -1.71
MACF1-228ENST00000528611 CCL18P55774 89 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 UBE2D3P61077 147 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 SUMO2P61956 95 aaKnown RBP4.34□□□□□ -1.71
MACF1-228ENST00000528611 UBE2D2P62837 147 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 MRPL51Q4U2R6 128 aaKnown RBP4.34□□□□□ -1.71
MACF1-228ENST00000528611 SUMO4Q6EEV6 95 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 AMN1Q8IY45 258 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 UPK3BQ9BT76 320 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 CHCHD7Q9BUK0 85 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 JPT2Q9H910 190 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 ST20Q9HBF5 79 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 TRAPPC1Q9Y5R8 145 aa4.34□□□□□ -1.71
MACF1-228ENST00000528611 TGP01266 2768 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 A0A096LPF7 62 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 TGIF2-C20orf24A0A0A6YYL0 155 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 MUC21A0A0G2JKD1 596 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 MUC21A0A140T8X8 626 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 I3L3M4 83 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 TNFRSF6BO95407 300 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 MGPP08493 103 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 GYPEP15421 78 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 RAB5AP20339 215 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 RAB5BP61020 215 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 OR10J3Q5JRS4 329 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 TMEM88Q6PEY1 159 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 NEXN-AS1Q8NBZ9 246 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 ATP6V0E2Q8NHE4 81 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 PRELID3AQ96N28 172 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 KIR2DL4Q99706 377 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 MRPL18Q9H0U6 180 aaKnown RBP4.33□□□□□ -1.72
MACF1-228ENST00000528611 NXT2Q9NPJ8 142 aaKnown RBP4.33□□□□□ -1.72
MACF1-228ENST00000528611 APLNQ9ULZ1 77 aa4.33□□□□□ -1.72
MACF1-228ENST00000528611 SDHAF1A6NFY7 115 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 LINC01546A6NGU7 62 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 IGLL5B9A064 214 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 D6R8Y8 96 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 NPSP0C0P6 89 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 HTN3P15516 51 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 PMCHP20382 165 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 FABP9Q0Z7S8 132 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 IQCJQ1A5X6 159 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 CASC10Q5T4H9 136 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 LELP1Q5T871 98 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 LGALS9CQ6DKI2 356 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 CBLN2Q8IUK8 224 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 NRACQ8N912 160 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 ZNRF2Q8NHG8 242 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 TMEM18Q96B42 140 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 ALKBH7Q9BT30 221 aaPredicted RBP4.32□□□□□ -1.72
MACF1-228ENST00000528611 TMEM70Q9BUB7 260 aa4.32□□□□□ -1.72
MACF1-228ENST00000528611 MAP1LC3AQ9H492 121 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms