RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CCKP06307 115 aa5.59□□□□□ -1.51
CTNND1-216ENST00000527467 CKAP5Q14008 2032 aa5.59□□□□□ -1.51
CTNND1-216ENST00000527467 C1orf158Q8N1D5 194 aa5.59□□□□□ -1.51
CTNND1-216ENST00000527467 CRYGDP07320 174 aa5.59□□□□□ -1.51
CTNND1-216ENST00000527467 ODF1Q14990 250 aa5.59□□□□□ -1.51
CTNND1-216ENST00000527467 SPATA3Q8NHX4 192 aa5.59□□□□□ -1.51
CTNND1-216ENST00000527467 A0A096LNI7 61 aa5.59□□□□□ -1.51
CTNND1-216ENST00000527467 SPART-AS1P0CW21 52 aa5.59□□□□□ -1.51
CTNND1-216ENST00000527467 RPL39P62891 51 aaKnown RBP5.59□□□□□ -1.51
CTNND1-216ENST00000527467 NFE4Q86UQ8 179 aa5.59□□□□□ -1.51
CTNND1-216ENST00000527467 NACAE9PAV3 2078 aa5.59□□□□□ -1.52
CTNND1-216ENST00000527467 FANCMQ8IYD8 2048 aa5.59□□□□□ -1.52
CTNND1-216ENST00000527467 GRNP28799 593 aaKnown RBP5.58□□□□□ -1.52
CTNND1-216ENST00000527467 PRO0628Q9UI54 55 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 LRCOL1A6NCL2 159 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 RBX1P62877 108 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 ZNF833PQ6ZTB9 187 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 IGHV4-30-4P0DP06 118 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 IGHV4-31P0DP07 118 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 GGNQ86UU5 652 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 APRG1Q8IVJ8 170 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 FLVCR1-AS1Q8TAF5 88 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 UBE2D4Q9Y2X8 147 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 IGKV1-6A0A0C4DH72 117 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 LYPD2Q6UXB3 125 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 FAM19A5Q7Z5A7 132 aaPredicted RBP5.58□□□□□ -1.52
CTNND1-216ENST00000527467 GTSF1Q8WW33 167 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 MED12Q93074 2177 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 LRRK1Q38SD2 2015 aa5.58□□□□□ -1.52
CTNND1-216ENST00000527467 WT1-ASQ06250 92 aa5.57□□□□□ -1.52
CTNND1-216ENST00000527467 MYOFQ9NZM1 2061 aa5.57□□□□□ -1.52
CTNND1-216ENST00000527467 PTPRQQ9UMZ3 2332 aa5.57□□□□□ -1.52
CTNND1-216ENST00000527467 PDCD11Q14690 1871 aaKnown RBP5.57□□□□□ -1.52
CTNND1-216ENST00000527467 TRAV7A0A075B6U4 112 aa5.57□□□□□ -1.52
CTNND1-216ENST00000527467 PINLYPA6NC86 204 aa5.57□□□□□ -1.52
CTNND1-216ENST00000527467 H3BUA1 57 aa5.57□□□□□ -1.52
CTNND1-216ENST00000527467 PRYO14603 147 aa5.57□□□□□ -1.52
CTNND1-216ENST00000527467 TMEM263Q8WUH6 116 aaKnown RBP5.57□□□□□ -1.52
CTNND1-216ENST00000527467 PSPHP1O15172 72 aa5.57□□□□□ -1.52
CTNND1-216ENST00000527467 MRPS12O15235 138 aaKnown RBP5.57□□□□□ -1.52
CTNND1-216ENST00000527467 Q6ZVQ6 151 aa5.57□□□□□ -1.52
CTNND1-216ENST00000527467 Q8N9W7 124 aa5.57□□□□□ -1.52
CTNND1-216ENST00000527467 C2orf16Q68DN1 1984 aa5.57□□□□□ -1.52
CTNND1-216ENST00000527467 TRBV7-6A0A0J9YX20 115 aa5.57□□□□□ -1.52
CTNND1-216ENST00000527467 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.57□□□□□ -1.52
CTNND1-216ENST00000527467 A0A0J9YXY3 114 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 Q8N976 141 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 ZNF407Q9C0G0 2248 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 WNK2Q9Y3S1 2297 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 NYNRINQ9P2P1 1898 aaKnown RBP5.56□□□□□ -1.52
CTNND1-216ENST00000527467 TMEM223A0PJW6 202 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 MED14OSP0DP75 135 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 CXCL6P80162 114 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 RUSC1-AS1Q66K80 236 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 FAM19A1Q7Z5A9 133 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 FAM215AQ9Y5M1 114 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 DOCK7Q96N67 2140 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 C14orf177Q52M58 125 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 TRBV30A0A0K0K1B3 111 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 C3orf84H3BNL1 204 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 Q6JHZ5 121 aa5.56□□□□□ -1.52
CTNND1-216ENST00000527467 SLPIP03973 132 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 COL8A2P25067 703 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 LOXP28300 417 aaPredicted RBP5.55□□□□□ -1.52
CTNND1-216ENST00000527467 LINC00311Q8N616 119 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 NRACQ8N912 160 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 LINC00526Q96FQ7 95 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 MSRB1Q9NZV6 116 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 DOCK11Q5JSL3 2073 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 NCOR2Q9Y618 2525 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 COL5A1P20908 1838 aaPredicted RBP5.55□□□□□ -1.52
CTNND1-216ENST00000527467 SPRY2O43597 315 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 ALPK2Q86TB3 2170 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 ZNF581Q9P0T4 197 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 CELA1Q9UNI1 258 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 DENND4AQ7Z401 1863 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 A0A1W2PNU3 283 aaPredicted RBP5.55□□□□□ -1.52
CTNND1-216ENST00000527467 C2orf70A6NJV1 201 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 E7EQL1 145 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 C20orf203Q8NBC4 194 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 FAM30AQ9NZY2 134 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 KLK12Q9UKR0 248 aa5.55□□□□□ -1.52
CTNND1-216ENST00000527467 KLK5Q9Y337 293 aaPredicted RBP5.55□□□□□ -1.52
CTNND1-216ENST00000527467 MAPK1IP1LQ8NDC0 245 aa5.54□□□□□ -1.52
CTNND1-216ENST00000527467 IGKV1D-37A0A075B6S9 117 aa5.54□□□□□ -1.52
CTNND1-216ENST00000527467 F8W735 103 aaPredicted RBP5.54□□□□□ -1.52
CTNND1-216ENST00000527467 FHL1Q13642 323 aa5.54□□□□□ -1.52
CTNND1-216ENST00000527467 ZNRD1Q9P1U0 126 aa5.54□□□□□ -1.52
CTNND1-216ENST00000527467 HHLA3Q9XRX5 114 aa5.54□□□□□ -1.52
CTNND1-216ENST00000527467 Q6ZQY7 126 aa5.54□□□□□ -1.52
CTNND1-216ENST00000527467 RNF144BQ7Z419 303 aa5.54□□□□□ -1.52
CTNND1-216ENST00000527467 ZNF524Q96C55 264 aa5.54□□□□□ -1.52
CTNND1-216ENST00000527467 MDFICQ9P1T7 246 aa5.54□□□□□ -1.52
CTNND1-216ENST00000527467 TNRC6AQ8NDV7 1962 aaKnown RBP5.54□□□□□ -1.52
CTNND1-216ENST00000527467 IGKV2-24A0A0C4DH68 120 aa5.53□□□□□ -1.52
CTNND1-216ENST00000527467 TRIAP1O43715 76 aa5.53□□□□□ -1.52
CTNND1-216ENST00000527467 DIAPH2-AS1Q14236 149 aa5.53□□□□□ -1.52
CTNND1-216ENST00000527467 C9orf66Q5T8R8 295 aa5.53□□□□□ -1.52
CTNND1-216ENST00000527467 KIAA2026Q5HYC2 2103 aa5.53□□□□□ -1.52
CTNND1-216ENST00000527467 XGP55808 180 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms