RNA–Protein interactions for RNA: ENST00000527373.1

UBQLN1-204, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-204ENST00000527373 LINC00476Q8WZB0 136 aa7.27□□□□□ -1.25
UBQLN1-204ENST00000527373 URGCP-MRPS24S4R325 110 aa7.27□□□□□ -1.25
UBQLN1-204ENST00000527373 TRAV26-2A0A0B4J265 109 aa7.26□□□□□ -1.25
UBQLN1-204ENST00000527373 TRBV10-1A0A0K0K1A3 114 aa7.26□□□□□ -1.25
UBQLN1-204ENST00000527373 A0A1B0GW15 77 aa7.26□□□□□ -1.25
UBQLN1-204ENST00000527373 S100A8P05109 93 aa7.26□□□□□ -1.25
UBQLN1-204ENST00000527373 HBBP68871 147 aa7.26□□□□□ -1.25
UBQLN1-204ENST00000527373 AMN1Q8IY45 258 aa7.26□□□□□ -1.25
UBQLN1-204ENST00000527373 BTF3L4Q96K17 158 aa7.26□□□□□ -1.25
UBQLN1-204ENST00000527373 TMEM191AQ9H0A3 160 aa7.26□□□□□ -1.25
UBQLN1-204ENST00000527373 TNFRSF18Q9Y5U5 241 aa7.26□□□□□ -1.25
UBQLN1-204ENST00000527373 TENM2Q9NT68 2774 aa7.26□□□□□ -1.25
UBQLN1-204ENST00000527373 TRBV7-3A0A075B6L6 115 aa7.25□□□□□ -1.25
UBQLN1-204ENST00000527373 A0A087WWC5 75 aa7.25□□□□□ -1.25
UBQLN1-204ENST00000527373 LCE6AA0A183 80 aa7.25□□□□□ -1.25
UBQLN1-204ENST00000527373 M0QY20 66 aa7.25□□□□□ -1.25
UBQLN1-204ENST00000527373 RASL11AQ6T310 242 aa7.25□□□□□ -1.25
UBQLN1-204ENST00000527373 LYPD5Q6UWN5 251 aa7.25□□□□□ -1.25
UBQLN1-204ENST00000527373 Q8N3U1 123 aa7.25□□□□□ -1.25
UBQLN1-204ENST00000527373 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.25□□□□□ -1.25
UBQLN1-204ENST00000527373 NEXN-AS1Q8NBZ9 246 aa7.25□□□□□ -1.25
UBQLN1-204ENST00000527373 IMMP2LQ96T52 175 aa7.25□□□□□ -1.25
UBQLN1-204ENST00000527373 LINC00588Q9Y4M8 146 aa7.25□□□□□ -1.25
UBQLN1-204ENST00000527373 ALMS1Q8TCU4 4167 aa7.24□□□□□ -1.25
UBQLN1-204ENST00000527373 IGHV3-38A0A0C4DH36 116 aa7.24□□□□□ -1.25
UBQLN1-204ENST00000527373 RAB4AP20338 218 aa7.24□□□□□ -1.25
UBQLN1-204ENST00000527373 ATP5L2Q7Z4Y8 100 aa7.24□□□□□ -1.25
UBQLN1-204ENST00000527373 GATD1Q8NB37 220 aa7.24□□□□□ -1.25
UBQLN1-204ENST00000527373 GTSF1LQ9H1H1 148 aa7.24□□□□□ -1.25
UBQLN1-204ENST00000527373 NIT2Q9NQR4 276 aa7.24□□□□□ -1.25
UBQLN1-204ENST00000527373 TMEM242Q9NWH2 141 aa7.24□□□□□ -1.25
UBQLN1-204ENST00000527373 IGLV2-18A0A075B6J9 118 aa7.23□□□□□ -1.25
UBQLN1-204ENST00000527373 A0A1B0GXF2 115 aa7.23□□□□□ -1.25
UBQLN1-204ENST00000527373 OR10J3Q5JRS4 329 aa7.23□□□□□ -1.25
UBQLN1-204ENST00000527373 FAM104BQ5XKR9 115 aa7.23□□□□□ -1.25
UBQLN1-204ENST00000527373 RPL39LQ96EH5 51 aaKnown RBP7.23□□□□□ -1.25
UBQLN1-204ENST00000527373 RNF185Q96GF1 192 aa7.23□□□□□ -1.25
UBQLN1-204ENST00000527373 DNAJC30Q96LL9 226 aa7.23□□□□□ -1.25
UBQLN1-204ENST00000527373 SMKR1H3BMG3 65 aa7.22□□□□□ -1.25
UBQLN1-204ENST00000527373 NCR2O95944 276 aa7.22□□□□□ -1.25
UBQLN1-204ENST00000527373 CKS2P33552 79 aa7.22□□□□□ -1.25
UBQLN1-204ENST00000527373 UBE2D3P61077 147 aa7.22□□□□□ -1.25
UBQLN1-204ENST00000527373 UBE2D2P62837 147 aa7.22□□□□□ -1.25
UBQLN1-204ENST00000527373 MRPL51Q4U2R6 128 aaKnown RBP7.22□□□□□ -1.25
UBQLN1-204ENST00000527373 DEFB104AQ8WTQ1 72 aa7.22□□□□□ -1.25
UBQLN1-204ENST00000527373 MRAP2Q96G30 205 aa7.22□□□□□ -1.25
UBQLN1-204ENST00000527373 MRPS16Q9Y3D3 137 aaKnown RBP7.22□□□□□ -1.25
UBQLN1-204ENST00000527373 DNAH1Q9P2D7 4330 aa7.22□□□□□ -1.25
UBQLN1-204ENST00000527373 TRAV9-1A0A075B6T8 112 aa7.21□□□□□ -1.26
UBQLN1-204ENST00000527373 TRAV8-6A0A0B4J262 113 aa7.21□□□□□ -1.26
UBQLN1-204ENST00000527373 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
UBQLN1-204ENST00000527373 M0R2N4 97 aa7.21□□□□□ -1.26
UBQLN1-204ENST00000527373 LINC00694P0DN24 101 aa7.21□□□□□ -1.26
UBQLN1-204ENST00000527373 ATRAIDQ6UW56 229 aa7.21□□□□□ -1.26
UBQLN1-204ENST00000527373 KRTAP9-2Q9BYQ4 174 aa7.21□□□□□ -1.26
UBQLN1-204ENST00000527373 Q9H8V8 135 aa7.21□□□□□ -1.26
UBQLN1-204ENST00000527373 VPS13DQ5THJ4 4388 aa7.21□□□□□ -1.26
UBQLN1-204ENST00000527373 GAS8-AS1O95177 125 aa7.2□□□□□ -1.26
UBQLN1-204ENST00000527373 LELP1Q5T871 98 aa7.2□□□□□ -1.26
UBQLN1-204ENST00000527373 DAZ4Q86SG3 579 aaKnown RBP7.2□□□□□ -1.26
UBQLN1-204ENST00000527373 FRZBQ92765 325 aa7.2□□□□□ -1.26
UBQLN1-204ENST00000527373 ST20Q9HBF5 79 aa7.2□□□□□ -1.26
UBQLN1-204ENST00000527373 DAZ3Q9NR90 486 aaKnown RBP7.2□□□□□ -1.26
UBQLN1-204ENST00000527373 TGIF2-C20orf24A0A0A6YYL0 155 aa7.19□□□□□ -1.26
UBQLN1-204ENST00000527373 D6R8Y8 96 aa7.19□□□□□ -1.26
UBQLN1-204ENST00000527373 SIVA1O15304 175 aa7.19□□□□□ -1.26
UBQLN1-204ENST00000527373 PMCHP20382 165 aa7.19□□□□□ -1.26
UBQLN1-204ENST00000527373 RPS10P46783 165 aaKnown RBP7.19□□□□□ -1.26
UBQLN1-204ENST00000527373 TIRAPP58753 221 aa7.19□□□□□ -1.26
UBQLN1-204ENST00000527373 WFDC10BQ8IUB3 73 aa7.19□□□□□ -1.26
UBQLN1-204ENST00000527373 SACSQ9NZJ4 4579 aa7.18□□□□□ -1.26
UBQLN1-204ENST00000527373 SDHAF1A6NFY7 115 aa7.18□□□□□ -1.26
UBQLN1-204ENST00000527373 TMEM262E9PQX1 116 aa7.18□□□□□ -1.26
UBQLN1-204ENST00000527373 PPP1R17O96001 155 aa7.18□□□□□ -1.26
UBQLN1-204ENST00000527373 COTL1Q14019 142 aa7.18□□□□□ -1.26
UBQLN1-204ENST00000527373 TMEM97Q5BJF2 176 aa7.18□□□□□ -1.26
UBQLN1-204ENST00000527373 TMEM136Q6ZRR5 245 aa7.18□□□□□ -1.26
UBQLN1-204ENST00000527373 ORMDL3Q8N138 153 aa7.18□□□□□ -1.26
UBQLN1-204ENST00000527373 CHCHD5Q9BSY4 110 aa7.18□□□□□ -1.26
UBQLN1-204ENST00000527373 UPK3BQ9BT76 320 aa7.18□□□□□ -1.26
UBQLN1-204ENST00000527373 SMCO4Q9NRQ5 59 aa7.18□□□□□ -1.26
UBQLN1-204ENST00000527373 TRBV25-1A0A075B6N4 114 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 TRBV6-8A0A0A6YYG3 113 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 IGHV3-30P01768 117 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 IGHV3-33P01772 117 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 HLA-DQA1P01909 254 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 APCSP02743 223 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 PPBPP02775 128 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 IGHV3-30-3P0DP02 117 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 IGHV3-30-5P0DP03 117 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 ELOBQ15370 118 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 KIAA1644Q3SXP7 199 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 COX19Q49B96 90 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 CBLN2Q8IUK8 224 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 PRELID3AQ96N28 172 aa7.17□□□□□ -1.26
UBQLN1-204ENST00000527373 LYSTQ99698 3801 aa7.16□□□□□ -1.26
UBQLN1-204ENST00000527373 TRAV9-2A0A087WT02 112 aa7.16□□□□□ -1.26
UBQLN1-204ENST00000527373 IGHV1-24A0A0C4DH33 117 aa7.16□□□□□ -1.26
UBQLN1-204ENST00000527373 TRBV6-5A0A0K0K1A5 114 aa7.16□□□□□ -1.26
UBQLN1-204ENST00000527373 KRTAP9-6A0A140TA67 174 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms