RNA–Protein interactions for RNA: ENST00000525359.1

CLNS1A-203, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-203ENST00000525359 CLPSL2Q6UWE3 100 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 LYPD5Q6UWN5 251 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 C5orf46Q6UWT4 87 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 ZNF833PQ6ZTB9 187 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 C7orf65Q6ZTY9 151 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 TMED4Q7Z7H5 227 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 DHFR2Q86XF0 187 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 GPHB5Q86YW7 130 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 GID4Q8IVV7 300 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 Q8N402 240 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 STX19Q8N4C7 294 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 TTC9CQ8N5M4 171 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 OR13C8Q8NGS7 320 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 OR5H6Q8NGV6 325 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 OR5AK2Q8NH90 309 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 MYOZ3Q8TDC0 251 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 C12orf43Q96C57 262 aaKnown RBP0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 PPP1R14BQ96C90 147 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 GNPNAT1Q96EK6 184 aaPredicted RBP0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 SMIM12Q96EX1 92 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 ATP6V1G3Q96LB4 118 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 S100A13Q99584 98 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 HOPXQ9BPY8 73 aaPredicted RBP0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 CMSS1Q9BQ75 279 aaKnown RBP0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 BCL7BQ9BQE9 202 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 TMEM208Q9BTX3 173 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 TMEM109Q9BVC6 243 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 PRRG3Q9BZD7 231 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 YIPF3Q9GZM5 350 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 CCDC90BQ9GZT6 254 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 SLC22A4Q9H015 551 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 CST11Q9H112 138 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 LPAR5Q9H1C0 372 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 CMC2Q9NRP2 79 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 PLEKHJ1Q9NW61 149 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 IL20Q9NYY1 176 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 ABRACLQ9P1F3 81 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 CD300AQ9UGN4 299 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 ERGIC3Q9Y282 383 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 CSPG4Q6UVK1 2322 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 AHNAKQ09666 5890 aaKnown RBP0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 FAT4Q6V0I7 4981 aa0.37□□□□□ -2.35
CLNS1A-203ENST00000525359 USH2AO75445 5202 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 SYNE2Q8WXH0 6885 aaKnown RBP0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 DOCK11Q5JSL3 2073 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 FAT3Q8TDW7 4589 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 MUC2Q02817 5179 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.36□□□□□ -2.358e-8■□□□□ 8.9
CLNS1A-203ENST00000525359 DNAH5Q8TE73 4624 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 TRGV1A0A0A0MS02 117 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 LOC100506127A0A0U1RQW1 187 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 IGLC7A0M8Q6 106 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 IRGMA1A4Y4 181 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 FUOMA2VDF0 154 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 OR4C46A6NHA9 309 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 CEBPZOSA8MTT3 80 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 OOSP1A8MZH6 123 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 C9JCJ5 164 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 F6UZH7 168 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 I3L2K1 104 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 K7EIM0 57 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 M0QZK8 103 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 GPR31O00270 319 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 SLC22A1O15245 554 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 HMGB3O15347 200 aaKnown RBP0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 ORC5O43913 435 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 GNG7O60262 68 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 YPEL1O60688 119 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 PITX3O75364 302 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 ARL6IP5O75915 188 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 SNAPC5O75971 98 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 IGKV1-5P01602 117 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 APOA2P02652 100 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 APOC1P02654 83 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 OR5G3P0C626 314 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 SPART-AS1P0CW21 52 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 C8orf88P0DMB2 117 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 CCL1P22362 96 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 NUP62P37198 522 aaPredicted RBP0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 CRYBA4P53673 196 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 CDC42P60953 191 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 RPL37AP61513 92 aaKnown RBP0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 PPP3R1P63098 170 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 HLA-DRB3P79483 266 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 QRFPP83859 136 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 PSG9Q00887 426 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 FABP5Q01469 135 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 CDK10Q15131 360 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 HMGN3Q15651 99 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 USF2Q15853 346 aaPredicted RBP0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 Q1T7F1 81 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 RRN3P1Q2M238 152 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 LGALS9BQ3B8N2 356 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 VMA21Q3ZAQ7 101 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 HSD17B12Q53GQ0 312 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 AADACL3Q5VUY0 350 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 TMEM244Q5VVB8 128 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 HACD4Q5VWC8 232 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 PATE2Q6UY27 113 aa0.36□□□□□ -2.35
CLNS1A-203ENST00000525359 DPPA3Q6W0C5 159 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms