RNA–Protein interactions for RNA: ENST00000525359.1

CLNS1A-203, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-203ENST00000525359 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
CLNS1A-203ENST00000525359 CHIC1Q5VXU3 224 aa15.24■□□□□ 0.03
CLNS1A-203ENST00000525359 SENP3Q9H4L4 574 aaPredicted RBP13.41□□□□□ -0.26
CLNS1A-203ENST00000525359 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
CLNS1A-203ENST00000525359 PLPPR3Q6T4P5 718 aa12.4□□□□□ -0.42
CLNS1A-203ENST00000525359 FOXD1Q16676 465 aa12.35□□□□□ -0.43
CLNS1A-203ENST00000525359 ADRA2BP18089 450 aa11.79□□□□□ -0.52
CLNS1A-203ENST00000525359 PPP6R1Q9UPN7 881 aa11.76□□□□□ -0.53
CLNS1A-203ENST00000525359 PIAS4Q8N2W9 510 aaPredicted RBP11.7□□□□□ -0.54
CLNS1A-203ENST00000525359 MSH5O43196 834 aa11.55□□□□□ -0.56
CLNS1A-203ENST00000525359 SCAF1Q9H7N4 1312 aaKnown RBP10.97□□□□□ -0.65
CLNS1A-203ENST00000525359 PPP4R3CPQ6ZMV5 832 aa10.87□□□□□ -0.67
CLNS1A-203ENST00000525359 MAPK8IP2Q13387 824 aaPredicted RBP10.69□□□□□ -0.7
CLNS1A-203ENST00000525359 NCBP3Q53F19 620 aaKnown RBP10.67□□□□□ -0.7
CLNS1A-203ENST00000525359 DMRT2Q9Y5R5 561 aa10.64□□□□□ -0.71
CLNS1A-203ENST00000525359 CNKSR2Q8WXI2 1034 aa10.62□□□□□ -0.71
CLNS1A-203ENST00000525359 POTEDQ86YR6 584 aa10.57□□□□□ -0.72
CLNS1A-203ENST00000525359 KCNA4P22459 653 aa10.48□□□□□ -0.73
CLNS1A-203ENST00000525359 RNF216Q9NWF9 866 aaPredicted RBP10.43□□□□□ -0.74
CLNS1A-203ENST00000525359 NPM3O75607 178 aaKnown RBP10.38□□□□□ -0.75
CLNS1A-203ENST00000525359 HOXD11P31277 338 aaPredicted RBP10.37□□□□□ -0.75
CLNS1A-203ENST00000525359 DCAF8L1A6NGE4 600 aa10.26□□□□□ -0.77
CLNS1A-203ENST00000525359 DNAJC5BQ9UF47 199 aa10.11□□□□□ -0.79
CLNS1A-203ENST00000525359 SLC4A1APQ9BWU0 796 aaKnown RBP10.04□□□□□ -0.8
CLNS1A-203ENST00000525359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.97□□□□□ -0.813e-16■■□□□ 12.3
CLNS1A-203ENST00000525359 RNF39Q9H2S5 420 aa9.81□□□□□ -0.84
CLNS1A-203ENST00000525359 SLC4A2P04920 1241 aa9.78□□□□□ -0.84
CLNS1A-203ENST00000525359 C1QBPQ07021 282 aaKnown RBP9.76□□□□□ -0.85
CLNS1A-203ENST00000525359 FOXD4L1Q9NU39 408 aa9.74□□□□□ -0.85
CLNS1A-203ENST00000525359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.71□□□□□ -0.86
CLNS1A-203ENST00000525359 HNRNPUL2Q1KMD3 747 aaKnown RBP9.71□□□□□ -0.86
CLNS1A-203ENST00000525359 U3KPZ7 1027 aaPredicted RBP9.69□□□□□ -0.86
CLNS1A-203ENST00000525359 CACNB1Q02641 598 aaPredicted RBP9.68□□□□□ -0.86
CLNS1A-203ENST00000525359 APLP2Q06481 763 aa9.67□□□□□ -0.86
CLNS1A-203ENST00000525359 MYCNP04198 464 aaPredicted RBP9.66□□□□□ -0.86
CLNS1A-203ENST00000525359 SAMD1Q6SPF0 538 aaPredicted RBP9.64□□□□□ -0.87
CLNS1A-203ENST00000525359 EHMT2Q96KQ7 1210 aa9.62□□□□□ -0.87
CLNS1A-203ENST00000525359 ZBTB22O15209 634 aa9.57□□□□□ -0.88
CLNS1A-203ENST00000525359 CAPN15O75808 1086 aa9.51□□□□□ -0.89
CLNS1A-203ENST00000525359 CSRNP3Q8WYN3 585 aa9.49□□□□□ -0.89
CLNS1A-203ENST00000525359 ZNF219Q9P2Y4 722 aaPredicted RBP9.46□□□□□ -0.9
CLNS1A-203ENST00000525359 ATXN8OSP0DMR3 200 aa9.44□□□□□ -0.9
CLNS1A-203ENST00000525359 SPINK5Q9NQ38 1064 aaPredicted RBP9.44□□□□□ -0.9
CLNS1A-203ENST00000525359 TRHP20396 242 aaPredicted RBP9.42□□□□□ -0.9
CLNS1A-203ENST00000525359 DSG3P32926 999 aa9.29□□□□□ -0.92
CLNS1A-203ENST00000525359 ATF5Q9Y2D1 282 aaPredicted RBP9.27□□□□□ -0.93
CLNS1A-203ENST00000525359 ABCB7O75027 752 aa9.25□□□□□ -0.93
CLNS1A-203ENST00000525359 POLA2Q14181 598 aa9.23□□□□□ -0.93
CLNS1A-203ENST00000525359 ZBTB12Q9Y330 459 aaPredicted RBP9.18□□□□□ -0.94
CLNS1A-203ENST00000525359 FBLN2P98095 1184 aa9.09□□□□□ -0.95
CLNS1A-203ENST00000525359 RBM42Q9BTD8 480 aaKnown RBP8.98□□□□□ -0.97
CLNS1A-203ENST00000525359 OSCARQ8IYS5 282 aa8.9□□□□□ -0.98
CLNS1A-203ENST00000525359 MKRN4PQ13434 485 aaPredicted RBP8.88□□□□□ -0.99
CLNS1A-203ENST00000525359 SPDYE2BA6NHP3 402 aa8.86□□□□□ -0.99
CLNS1A-203ENST00000525359 SPDYE6P0CI01 402 aa8.86□□□□□ -0.99
CLNS1A-203ENST00000525359 SPDYE2Q495Y8 402 aa8.86□□□□□ -0.99
CLNS1A-203ENST00000525359 ZNF692Q9BU19 519 aaPredicted RBP8.81□□□□□ -1
CLNS1A-203ENST00000525359 AKT1S1Q96B36 256 aa8.8□□□□□ -1
CLNS1A-203ENST00000525359 SPDYE4A6NLX3 237 aa8.75□□□□□ -1.01
CLNS1A-203ENST00000525359 SSUH2Q9Y2M2 353 aa8.72□□□□□ -1.01
CLNS1A-203ENST00000525359 PABPN1Q86U42 306 aaKnown RBP eCLIP8.67□□□□□ -1.02
CLNS1A-203ENST00000525359 REM2Q8IYK8 340 aaPredicted RBP8.67□□□□□ -1.02
CLNS1A-203ENST00000525359 FKBP8Q14318 412 aa8.66□□□□□ -1.02
CLNS1A-203ENST00000525359 SPDYE1Q8NFV5 336 aaPredicted RBP8.65□□□□□ -1.02
CLNS1A-203ENST00000525359 STAG3Q9UJ98 1225 aa8.59□□□□□ -1.03
CLNS1A-203ENST00000525359 CHRDL2Q6WN34 429 aa8.58□□□□□ -1.04
CLNS1A-203ENST00000525359 CLEC11AQ9Y240 323 aa8.58□□□□□ -1.04
CLNS1A-203ENST00000525359 PITPNM1O00562 1244 aa8.56□□□□□ -1.04
CLNS1A-203ENST00000525359 PROM2Q8N271 834 aa8.52□□□□□ -1.05
CLNS1A-203ENST00000525359 PRR29P0C7W0 189 aa8.51□□□□□ -1.05
CLNS1A-203ENST00000525359 FBXO3Q9UK99 471 aa8.47□□□□□ -1.05
CLNS1A-203ENST00000525359 PLEKHG5O94827 1062 aa8.42□□□□□ -1.06
CLNS1A-203ENST00000525359 FXR2P51116 673 aaKnown RBP eCLIP8.42□□□□□ -1.06
CLNS1A-203ENST00000525359 PIP4P2Q8N4L2 257 aa8.4□□□□□ -1.06
CLNS1A-203ENST00000525359 POTEHQ6S545 545 aa8.39□□□□□ -1.07
CLNS1A-203ENST00000525359 PRKAR2AP13861 404 aaKnown RBP8.38□□□□□ -1.07
CLNS1A-203ENST00000525359 MIER1Q8N108 512 aa8.35□□□□□ -1.07
CLNS1A-203ENST00000525359 PLCD3Q8N3E9 789 aa8.35□□□□□ -1.07
CLNS1A-203ENST00000525359 ZBTB47Q9UFB7 747 aaPredicted RBP8.32□□□□□ -1.08
CLNS1A-203ENST00000525359 CHADLQ6NUI6 762 aa8.3□□□□□ -1.08
CLNS1A-203ENST00000525359 NPM1P06748 294 aaKnown RBP eCLIP8.29□□□□□ -1.08
CLNS1A-203ENST00000525359 CREBZFQ9NS37 354 aa8.29□□□□□ -1.08
CLNS1A-203ENST00000525359 VASPP50552 380 aaPredicted RBP8.27□□□□□ -1.09
CLNS1A-203ENST00000525359 FARP1Q9Y4F1 1045 aaPredicted RBP8.27□□□□□ -1.09
CLNS1A-203ENST00000525359 HAX1O00165 279 aa8.23□□□□□ -1.09
CLNS1A-203ENST00000525359 KLHL34Q8N239 644 aa8.22□□□□□ -1.09
CLNS1A-203ENST00000525359 PAK3O75914 559 aaPredicted RBP8.2□□□□□ -1.1
CLNS1A-203ENST00000525359 CD44P16070 742 aaKnown RBP8.15□□□□□ -1.1
CLNS1A-203ENST00000525359 MNX1P50219 401 aaPredicted RBP8.15□□□□□ -1.1
CLNS1A-203ENST00000525359 C19orf67A6NJJ6 358 aa8.13□□□□□ -1.11
CLNS1A-203ENST00000525359 IFNLR1Q8IU57 520 aaPredicted RBP8.1□□□□□ -1.11
CLNS1A-203ENST00000525359 SPOCK2Q92563 424 aa8.1□□□□□ -1.11
CLNS1A-203ENST00000525359 FAM212AQ96EL1 285 aa8.1□□□□□ -1.11
CLNS1A-203ENST00000525359 ZRANB1Q9UGI0 708 aa8.09□□□□□ -1.11
CLNS1A-203ENST00000525359 TSPYL2Q9H2G4 693 aaPredicted RBP8.07□□□□□ -1.12
CLNS1A-203ENST00000525359 CLCN6P51797 869 aa8.06□□□□□ -1.12
CLNS1A-203ENST00000525359 NUBP1P53384 320 aa8.05□□□□□ -1.12
CLNS1A-203ENST00000525359 GSE1Q14687 1217 aa8.05□□□□□ -1.12
CLNS1A-203ENST00000525359 DCAF8Q5TAQ9 597 aa8.05□□□□□ -1.12
CLNS1A-203ENST00000525359 RASEFQ8IZ41 740 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms