RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SAMD10Q9BYL1 202 aa8.65□□□□□ -1.02
VEGFA-225ENST00000523950 RPP21Q9H633 154 aaKnown RBP8.65□□□□□ -1.02
VEGFA-225ENST00000523950 JPT2Q9H910 190 aa8.65□□□□□ -1.02
VEGFA-225ENST00000523950 LOC100131303A0A0U1RQF7 123 aa8.64□□□□□ -1.03
VEGFA-225ENST00000523950 NBDYA0A0U1RRE5 68 aa8.64□□□□□ -1.03
VEGFA-225ENST00000523950 BTF3P20290 206 aaKnown RBP8.64□□□□□ -1.03
VEGFA-225ENST00000523950 WDR73Q6P4I2 378 aa8.64□□□□□ -1.03
VEGFA-225ENST00000523950 TMEM18Q96B42 140 aa8.64□□□□□ -1.03
VEGFA-225ENST00000523950 PACRGQ96M98 296 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-225ENST00000523950 AP1S3Q96PC3 154 aa8.64□□□□□ -1.03
VEGFA-225ENST00000523950 OSTCQ9NRP0 149 aa8.64□□□□□ -1.03
VEGFA-225ENST00000523950 A0A087WWL8 130 aa8.63□□□□□ -1.03
VEGFA-225ENST00000523950 TRBV10-1A0A0K0K1A3 114 aa8.63□□□□□ -1.03
VEGFA-225ENST00000523950 IFITM10A6NMD0 228 aa8.63□□□□□ -1.03
VEGFA-225ENST00000523950 M0R2N4 97 aa8.63□□□□□ -1.03
VEGFA-225ENST00000523950 GATCO43716 136 aaKnown RBP8.63□□□□□ -1.03
VEGFA-225ENST00000523950 GZMBP10144 247 aa8.63□□□□□ -1.03
VEGFA-225ENST00000523950 CTRLP40313 264 aa8.63□□□□□ -1.03
VEGFA-225ENST00000523950 RAB4BP61018 213 aa8.63□□□□□ -1.03
VEGFA-225ENST00000523950 CT83Q5H943 113 aa8.63□□□□□ -1.03
VEGFA-225ENST00000523950 RASL11AQ6T310 242 aa8.63□□□□□ -1.03
VEGFA-225ENST00000523950 LINC00336Q6ZUF6 198 aa8.63□□□□□ -1.03
VEGFA-225ENST00000523950 OR10D4PQ8NGN7 298 aa8.63□□□□□ -1.03
VEGFA-225ENST00000523950 RNASE7Q9H1E1 156 aaKnown RBP8.63□□□□□ -1.03
VEGFA-225ENST00000523950 K7EP13 123 aa8.62□□□□□ -1.03
VEGFA-225ENST00000523950 SIVA1O15304 175 aa8.62□□□□□ -1.03
VEGFA-225ENST00000523950 SMIM17P0DL12 118 aa8.62□□□□□ -1.03
VEGFA-225ENST00000523950 LINC00694P0DN24 101 aa8.62□□□□□ -1.03
VEGFA-225ENST00000523950 ERVFC1-1P60608 527 aa8.62□□□□□ -1.03
VEGFA-225ENST00000523950 JOSD1Q15040 202 aaPredicted RBP8.62□□□□□ -1.03
VEGFA-225ENST00000523950 PYY3Q5JQD4 70 aa8.62□□□□□ -1.03
VEGFA-225ENST00000523950 Q6ZSN1 163 aa8.62□□□□□ -1.03
VEGFA-225ENST00000523950 HIST1H2BLQ99880 126 aa8.62□□□□□ -1.03
VEGFA-225ENST00000523950 TPPP3Q9BW30 176 aa8.62□□□□□ -1.03
VEGFA-225ENST00000523950 CNFNQ9BYD5 112 aa8.62□□□□□ -1.03
VEGFA-225ENST00000523950 TRAPPC1Q9Y5R8 145 aa8.62□□□□□ -1.03
VEGFA-225ENST00000523950 A8MWL6 223 aa8.61□□□□□ -1.03
VEGFA-225ENST00000523950 TSTD3H0UI37 97 aa8.61□□□□□ -1.03
VEGFA-225ENST00000523950 LYZL1Q6UWQ5 148 aa8.61□□□□□ -1.03
VEGFA-225ENST00000523950 C14orf178Q8N769 122 aaPredicted RBP8.61□□□□□ -1.03
VEGFA-225ENST00000523950 ATP6V0E2Q8NHE4 81 aa8.61□□□□□ -1.03
VEGFA-225ENST00000523950 MUC21A0A0G2JKD1 596 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 MUC21A0A140T8X8 626 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 GAGE12JA6NER3 117 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 FABP4P15090 132 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 PKIAP61925 76 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 RPL36AP83881 106 aaKnown RBP8.6□□□□□ -1.03
VEGFA-225ENST00000523950 GAGE1Q13065 139 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 GAGE4Q13068 117 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 GAGE5Q13069 117 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 ZNF56Q15929 161 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 GAGE13Q4V321 117 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 LELP1Q5T871 98 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 C1orf134Q5TEV5 83 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 RPL36ALQ969Q0 106 aaKnown RBP8.6□□□□□ -1.03
VEGFA-225ENST00000523950 GNB1LQ9BYB4 327 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 GTSF1LQ9H1H1 148 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 KIF25-AS1Q9Y6Z4 181 aa8.6□□□□□ -1.03
VEGFA-225ENST00000523950 TRAV9-2A0A087WT02 112 aa8.59□□□□□ -1.03
VEGFA-225ENST00000523950 TRAV8-6A0A0B4J262 113 aa8.59□□□□□ -1.03
VEGFA-225ENST00000523950 FAM231BA6NCW3 169 aa8.59□□□□□ -1.03
VEGFA-225ENST00000523950 ESDP10768 282 aa8.59□□□□□ -1.03
VEGFA-225ENST00000523950 FOXA3P55318 350 aaPredicted RBP8.59□□□□□ -1.03
VEGFA-225ENST00000523950 C6orf223Q8N319 242 aa8.59□□□□□ -1.03
VEGFA-225ENST00000523950 GFRA4Q9GZZ7 299 aa8.59□□□□□ -1.03
VEGFA-225ENST00000523950 TRBV7-3A0A075B6L6 115 aa8.58□□□□□ -1.04
VEGFA-225ENST00000523950 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
VEGFA-225ENST00000523950 NTF3P20783 257 aa8.58□□□□□ -1.04
VEGFA-225ENST00000523950 SSTP61278 116 aa8.58□□□□□ -1.04
VEGFA-225ENST00000523950 IQCJQ1A5X6 159 aa8.58□□□□□ -1.04
VEGFA-225ENST00000523950 LBHQ53QV2 105 aaPredicted RBP8.58□□□□□ -1.04
VEGFA-225ENST00000523950 GTSF1Q8WW33 167 aa8.58□□□□□ -1.04
VEGFA-225ENST00000523950 BORCS7Q96B45 105 aa8.58□□□□□ -1.04
VEGFA-225ENST00000523950 DPH3P1Q9H4G8 78 aa8.58□□□□□ -1.04
VEGFA-225ENST00000523950 V9GYV3 84 aa8.58□□□□□ -1.04
VEGFA-225ENST00000523950 F5H697 171 aa8.57□□□□□ -1.04
VEGFA-225ENST00000523950 H7C1H1 209 aa8.57□□□□□ -1.04
VEGFA-225ENST00000523950 RTL8CO15255 209 aa8.57□□□□□ -1.04
VEGFA-225ENST00000523950 HLA-DQA1P01909 254 aa8.57□□□□□ -1.04
VEGFA-225ENST00000523950 EVI2AP22794 236 aa8.57□□□□□ -1.04
VEGFA-225ENST00000523950 LINC00315P59091 139 aa8.57□□□□□ -1.04
VEGFA-225ENST00000523950 Q0VG73 95 aa8.57□□□□□ -1.04
VEGFA-225ENST00000523950 TWIST1Q15672 202 aa8.57□□□□□ -1.04
VEGFA-225ENST00000523950 WFDC10BQ8IUB3 73 aa8.57□□□□□ -1.04
VEGFA-225ENST00000523950 TSKUQ8WUA8 353 aa8.57□□□□□ -1.04
VEGFA-225ENST00000523950 FRAS1Q86XX4 4008 aa8.57□□□□□ -1.04
VEGFA-225ENST00000523950 IGHV3-38A0A0C4DH36 116 aa8.56□□□□□ -1.04
VEGFA-225ENST00000523950 SMIM27A0A1W2PRY6 76 aa8.56□□□□□ -1.04
VEGFA-225ENST00000523950 LINC00587B1AMM8 73 aa8.56□□□□□ -1.04
VEGFA-225ENST00000523950 UBE2D3P61077 147 aa8.56□□□□□ -1.04
VEGFA-225ENST00000523950 UBE2D2P62837 147 aa8.56□□□□□ -1.04
VEGFA-225ENST00000523950 LINC01556Q5JQF7 62 aa8.56□□□□□ -1.04
VEGFA-225ENST00000523950 OR10J3Q5JRS4 329 aa8.56□□□□□ -1.04
VEGFA-225ENST00000523950 SMIM15Q7Z3B0 74 aa8.56□□□□□ -1.04
VEGFA-225ENST00000523950 C10orf126Q8N4M7 172 aa8.56□□□□□ -1.04
VEGFA-225ENST00000523950 DNAJC30Q96LL9 226 aa8.56□□□□□ -1.04
VEGFA-225ENST00000523950 KRTAP1-5Q9BYS1 174 aa8.56□□□□□ -1.04
VEGFA-225ENST00000523950 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
VEGFA-225ENST00000523950 DNAH10Q8IVF4 4471 aa8.55□□□□□ -1.04
VEGFA-225ENST00000523950 PRSS29PA6NIE9 313 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms