RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 M0R2N4 97 aa6.4□□□□□ -1.38
CLK4-209ENST00000521621 GZMBP10144 247 aa6.4□□□□□ -1.38
CLK4-209ENST00000521621 PNRC1Q12796 327 aaPredicted RBP6.4□□□□□ -1.38
CLK4-209ENST00000521621 MSRB1Q9NZV6 116 aa6.4□□□□□ -1.38
CLK4-209ENST00000521621 SMIM27A0A1W2PRY6 76 aa6.4□□□□□ -1.39
CLK4-209ENST00000521621 GAGE12JA6NER3 117 aa6.4□□□□□ -1.39
CLK4-209ENST00000521621 GAGE1Q13065 139 aa6.4□□□□□ -1.39
CLK4-209ENST00000521621 GAGE4Q13068 117 aa6.4□□□□□ -1.39
CLK4-209ENST00000521621 GAGE5Q13069 117 aa6.4□□□□□ -1.39
CLK4-209ENST00000521621 ZNF56Q15929 161 aa6.4□□□□□ -1.39
CLK4-209ENST00000521621 GAGE13Q4V321 117 aa6.4□□□□□ -1.39
CLK4-209ENST00000521621 FAM74A4Q5TZK3 123 aa6.4□□□□□ -1.39
CLK4-209ENST00000521621 TRBV6-5A0A0K0K1A5 114 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 ELOBQ15370 118 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 RASL11AQ6T310 242 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 TMEM191AQ9H0A3 160 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 PKD1P98161 4303 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 PPP1R2P9O14990 202 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 NCR2O95944 276 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 SRSF3P84103 164 aaKnown RBP6.39□□□□□ -1.39
CLK4-209ENST00000521621 SUMO4Q6EEV6 95 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 ATRAIDQ6UW56 229 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 SMIM15Q7Z3B0 74 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 BORCS7Q96B45 105 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 NIT2Q9NQR4 276 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 NAT8BQ9UHF3 227 aa6.39□□□□□ -1.39
CLK4-209ENST00000521621 TRBV6-8A0A0A6YYG3 113 aa6.38□□□□□ -1.39
CLK4-209ENST00000521621 IFITM2Q01629 132 aa6.38□□□□□ -1.39
CLK4-209ENST00000521621 IQCJQ1A5X6 159 aa6.38□□□□□ -1.39
CLK4-209ENST00000521621 NIT1Q86X76 327 aa6.38□□□□□ -1.39
CLK4-209ENST00000521621 BIRC6Q9NR09 4857 aa6.38□□□□□ -1.39
CLK4-209ENST00000521621 A0A1B0GUT8 65 aa6.38□□□□□ -1.39
CLK4-209ENST00000521621 OR10J3Q5JRS4 329 aa6.38□□□□□ -1.39
CLK4-209ENST00000521621 CDPF1Q6NVV7 123 aa6.38□□□□□ -1.39
CLK4-209ENST00000521621 COX11Q9Y6N1 276 aa6.38□□□□□ -1.39
CLK4-209ENST00000521621 H7C423 109 aa6.37□□□□□ -1.39
CLK4-209ENST00000521621 TWIST1Q15672 202 aa6.37□□□□□ -1.39
CLK4-209ENST00000521621 MRAP2Q96G30 205 aa6.37□□□□□ -1.39
CLK4-209ENST00000521621 Q9UF83 564 aa6.37□□□□□ -1.39
CLK4-209ENST00000521621 TRAV8-3A0A0A6YYJ7 113 aa6.37□□□□□ -1.39
CLK4-209ENST00000521621 PPP1R17O96001 155 aa6.37□□□□□ -1.39
CLK4-209ENST00000521621 RIGQ13278 110 aa6.37□□□□□ -1.39
CLK4-209ENST00000521621 HIGD1CA8MV81 97 aa6.36□□□□□ -1.39
CLK4-209ENST00000521621 TM2D2Q9BX73 214 aa6.36□□□□□ -1.39
CLK4-209ENST00000521621 TNFRSF18Q9Y5U5 241 aa6.36□□□□□ -1.39
CLK4-209ENST00000521621 EPPK1P58107 5090 aaKnown RBP6.36□□□□□ -1.39
CLK4-209ENST00000521621 RPL32P62910 135 aaKnown RBP6.36□□□□□ -1.39
CLK4-209ENST00000521621 ATP5L2Q7Z4Y8 100 aa6.36□□□□□ -1.39
CLK4-209ENST00000521621 ANAPC16Q96DE5 110 aa6.36□□□□□ -1.39
CLK4-209ENST00000521621 A0A1B0GUV1 79 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 F5H697 171 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 S100A8P05109 93 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 TNP2Q05952 138 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 Q0VG73 95 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 KCNIP4Q6PIL6 250 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 NUP35Q8NFH5 326 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 RMI2Q96E14 147 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 IMMP2LQ96T52 175 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 TPPP3Q9BW30 176 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 CEBPGP53567 150 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 ADIRFQ15847 76 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 NTN5Q8WTR8 489 aaPredicted RBP6.35□□□□□ -1.39
CLK4-209ENST00000521621 IGHV1-24A0A0C4DH33 117 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 PGPEP1Q9NXJ5 209 aa6.35□□□□□ -1.39
CLK4-209ENST00000521621 DYNC1H1Q14204 4646 aaKnown RBP6.34□□□□□ -1.39
CLK4-209ENST00000521621 TRBV25-1A0A075B6N4 114 aa6.34□□□□□ -1.39
CLK4-209ENST00000521621 MUC21A0A0G2JKD1 596 aa6.34□□□□□ -1.39
CLK4-209ENST00000521621 MUC21A0A140T8X8 626 aa6.34□□□□□ -1.39
CLK4-209ENST00000521621 A0A1B0GXF2 115 aa6.34□□□□□ -1.39
CLK4-209ENST00000521621 LINC00862A6NCI5 91 aa6.34□□□□□ -1.39
CLK4-209ENST00000521621 EREGO14944 169 aa6.34□□□□□ -1.39
CLK4-209ENST00000521621 MGPP08493 103 aa6.34□□□□□ -1.39
CLK4-209ENST00000521621 NTM-AS1Q6ZSK4 140 aa6.34□□□□□ -1.39
CLK4-209ENST00000521621 RNF185Q96GF1 192 aa6.34□□□□□ -1.39
CLK4-209ENST00000521621 DNAH11Q96DT5 4516 aa6.34□□□□□ -1.39
CLK4-209ENST00000521621 C10orf91Q5T1B1 145 aa6.34□□□□□ -1.4
CLK4-209ENST00000521621 PRR34Q9NV39 138 aa6.34□□□□□ -1.4
CLK4-209ENST00000521621 RAB4AP20338 218 aa6.33□□□□□ -1.4
CLK4-209ENST00000521621 TRAV9-1A0A075B6T8 112 aa6.33□□□□□ -1.4
CLK4-209ENST00000521621 A0A087WTM6 91 aa6.33□□□□□ -1.4
CLK4-209ENST00000521621 LRCOL1A6NCL2 159 aa6.33□□□□□ -1.4
CLK4-209ENST00000521621 PHOX2AO14813 284 aa6.33□□□□□ -1.4
CLK4-209ENST00000521621 URGCP-MRPS24S4R325 110 aa6.33□□□□□ -1.4
CLK4-209ENST00000521621 TCAPO15273 167 aa6.32□□□□□ -1.4
CLK4-209ENST00000521621 SEC11CQ9BY50 192 aa6.32□□□□□ -1.4
CLK4-209ENST00000521621 TRBV24-1A0A075B6N3 115 aa6.32□□□□□ -1.4
CLK4-209ENST00000521621 TRBV27A0A0K0K1C4 114 aa6.32□□□□□ -1.4
CLK4-209ENST00000521621 MT-ND4LP03901 98 aa6.32□□□□□ -1.4
CLK4-209ENST00000521621 POLR2KP53803 58 aaKnown RBP6.32□□□□□ -1.4
CLK4-209ENST00000521621 CTDSP1Q9GZU7 261 aa6.32□□□□□ -1.4
CLK4-209ENST00000521621 TMEM242Q9NWH2 141 aa6.32□□□□□ -1.4
CLK4-209ENST00000521621 TMEM218A2RU14 115 aa6.31□□□□□ -1.4
CLK4-209ENST00000521621 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
CLK4-209ENST00000521621 F8W036 122 aa6.31□□□□□ -1.4
CLK4-209ENST00000521621 CDK2AP2O75956 126 aa6.31□□□□□ -1.4
CLK4-209ENST00000521621 FAM104BQ5XKR9 115 aa6.31□□□□□ -1.4
CLK4-209ENST00000521621 C20orf78Q9BR46 151 aa6.31□□□□□ -1.4
CLK4-209ENST00000521621 I3L3M4 83 aa6.31□□□□□ -1.4
CLK4-209ENST00000521621 PPBPP02775 128 aa6.31□□□□□ -1.4
CLK4-209ENST00000521621 MIAQ16674 131 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms