RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-218	ENST00000520887	PKIA	P61925	76 aa		4.17	□□□□□ -1.74
FAM49B-218	ENST00000520887	RPL23	P62829	140 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-218	ENST00000520887	TMEM97	Q5BJF2	176 aa		4.17	□□□□□ -1.74
FAM49B-218	ENST00000520887	LGALS9C	Q6DKI2	356 aa		4.17	□□□□□ -1.74
FAM49B-218	ENST00000520887	WDR73	Q6P4I2	378 aa		4.17	□□□□□ -1.74
FAM49B-218	ENST00000520887	TSKU	Q8WUA8	353 aa		4.17	□□□□□ -1.74
FAM49B-218	ENST00000520887	ISOC2	Q96AB3	205 aa		4.17	□□□□□ -1.74
FAM49B-218	ENST00000520887	ZNF479	Q96JC4	524 aa		4.17	□□□□□ -1.74
FAM49B-218	ENST00000520887	BTF3L4	Q96K17	158 aa		4.17	□□□□□ -1.74
FAM49B-218	ENST00000520887	URGCP-MRPS24	S4R325	110 aa		4.17	□□□□□ -1.74
FAM49B-218	ENST00000520887	TRAV9-2	A0A087WT02	112 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	IGHV3-73	A0A0B4J1V6	119 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	TRAV8-6	A0A0B4J262	113 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	TRBV10-1	A0A0K0K1A3	114 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	HIGD1C	A8MV81	97 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	PPP1R17	O96001	155 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	IGLV2-8	P01709	118 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	CTRL	P40313	264 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	CRYBA4	P53673	196 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	RAB4B	P61018	213 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	RNF212	Q495C1	297 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	CFAP126	Q5VTH2	177 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	LYZL1	Q6UWQ5	148 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887		Q6ZQT7	251 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	OR10AG1	Q8NH19	301 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	PGLYRP4	Q96LB8	373 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	SEC11C	Q9BY50	192 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887	MSRB1	Q9NZV6	116 aa		4.16	□□□□□ -1.74
FAM49B-218	ENST00000520887		A0A087WWC5	75 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	LCE6A	A0A183	80 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	TMEM218	A2RU14	115 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	LINC00862	A6NCI5	91 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887		K7EN84	100 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	SNAPIN	O95295	136 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	IGLC6	P0CF74	106 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	GZMB	P10144	247 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	GATA1	P15976	413 aa	Predicted RBP	4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	NTF3	P20783	257 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	SMAGP	Q0VAQ4	97 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	SVBP	Q8N300	66 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	POM121L12	Q8N7R1	296 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	NRAC	Q8N912	160 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	ATP6V0E2	Q8NHE4	81 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	MPLKIP	Q8TAP9	179 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	FRZB	Q92765	325 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	SCRT2	Q9NQ03	307 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	APLN	Q9ULZ1	77 aa		4.15	□□□□□ -1.75
FAM49B-218	ENST00000520887	MUC21	A0A0G2JKD1	596 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	MUC21	A0A140T8X8	626 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	PRSS47	A8MTI9	375 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	NXPH4	O95158	308 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	EVI2A	P22794	236 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	HBB	P68871	147 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	IFITM2	Q01629	132 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	RHEB	Q15382	184 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	COX19	Q49B96	90 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	OR10J3	Q5JRS4	329 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	ATP5L2	Q7Z4Y8	100 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	C10orf126	Q8N4M7	172 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	C14orf178	Q8N769	122 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	SLC25A29	Q8N8R3	303 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	DNAJC30	Q96LL9	226 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	DNAH3	Q8TD57	4116 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	MEGF8	Q7Z7M0	2845 aa		4.14	□□□□□ -1.75
FAM49B-218	ENST00000520887	TRBV7-3	A0A075B6L6	115 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	TRAV9-1	A0A075B6T8	112 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887		A0A096LPF7	62 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	GAGE12J	A6NER3	117 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887		K7EP13	123 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	UBE2L6	O14933	153 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	TCAP	O15273	167 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	GAGE1	Q13065	139 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	GAGE4	Q13068	117 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	GAGE5	Q13069	117 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	ELOB	Q15370	118 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	RASL11A	Q6T310	242 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	DAZ4	Q86SG3	579 aa	Known RBP	4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	ZNRF2	Q8NHG8	242 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	MRAP2	Q96G30	205 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	CNFN	Q9BYD5	112 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	GTSF1L	Q9H1H1	148 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	RPS10P5	Q9NQ39	176 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	DAZ3	Q9NR90	486 aa	Known RBP	4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	MRPS16	Q9Y3D3	137 aa	Known RBP	4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887		V9GYV3	84 aa		4.13	□□□□□ -1.75
FAM49B-218	ENST00000520887	MUC4	Q99102	2169 aa		4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	TRBV25-1	A0A075B6N4	114 aa		4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887		A0A087WX48	190 aa		4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	SMIM27	A0A1W2PRY6	76 aa		4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	SIVA1	O15304	175 aa		4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	APOC3	P02656	99 aa		4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	CAMP	P49913	170 aa		4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	FOXA3	P55318	350 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	COTL1	Q14019	142 aa		4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	LELP1	Q5T871	98 aa		4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	MRPL54	Q6P161	138 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	NUP35	Q8NFH5	326 aa		4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	VSIG2	Q96IQ7	327 aa		4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	IMMP2L	Q96T52	175 aa		4.12	□□□□□ -1.75
FAM49B-218	ENST00000520887	TMEM191A	Q9H0A3	160 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms