RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 IGLC6P0CF74 106 aa12.94□□□□□ -0.34
CTNNA1-213ENST00000519113 HIST1H2BOP23527 126 aa12.94□□□□□ -0.34
CTNNA1-213ENST00000519113 HIST1H2BBP33778 126 aa12.94□□□□□ -0.34
CTNNA1-213ENST00000519113 HIST1H2BDP58876 126 aa12.94□□□□□ -0.34
CTNNA1-213ENST00000519113 HIST1H2BCP62807 126 aa12.94□□□□□ -0.34
CTNNA1-213ENST00000519113 HIST2H2BEQ16778 126 aa12.94□□□□□ -0.34
CTNNA1-213ENST00000519113 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-213ENST00000519113 HIST1H2BHQ93079 126 aa12.94□□□□□ -0.34
CTNNA1-213ENST00000519113 HIST1H2BNQ99877 126 aa12.94□□□□□ -0.34
CTNNA1-213ENST00000519113 HIST1H2BMQ99879 126 aa12.94□□□□□ -0.34
CTNNA1-213ENST00000519113 TRAV9-2A0A087WT02 112 aa12.93□□□□□ -0.34
CTNNA1-213ENST00000519113 TRAV12-3A0A0B4J271 114 aa12.93□□□□□ -0.34
CTNNA1-213ENST00000519113 ARMS2P0C7Q2 107 aa12.93□□□□□ -0.34
CTNNA1-213ENST00000519113 CTRLP40313 264 aa12.93□□□□□ -0.34
CTNNA1-213ENST00000519113 NDUFA6P56556 154 aa12.93□□□□□ -0.34
CTNNA1-213ENST00000519113 Q6ZQT7 251 aa12.93□□□□□ -0.34
CTNNA1-213ENST00000519113 MDFICQ9P1T7 246 aa12.93□□□□□ -0.34
CTNNA1-213ENST00000519113 TNFRSF18Q9Y5U5 241 aa12.93□□□□□ -0.34
CTNNA1-213ENST00000519113 ICOSQ9Y6W8 199 aa12.93□□□□□ -0.34
CTNNA1-213ENST00000519113 ANXA2RQ3ZCQ2 193 aa12.92□□□□□ -0.34
CTNNA1-213ENST00000519113 DNAH10OSP0CZ25 163 aa12.91□□□□□ -0.34
CTNNA1-213ENST00000519113 GCSHP23434 173 aa12.91□□□□□ -0.34
CTNNA1-213ENST00000519113 ASIPP42127 132 aa12.91□□□□□ -0.34
CTNNA1-213ENST00000519113 MUC21Q5SSG8 566 aa12.91□□□□□ -0.34
CTNNA1-213ENST00000519113 FAM159AQ6UWV7 190 aa12.91□□□□□ -0.34
CTNNA1-213ENST00000519113 KCNS1Q96KK3 526 aa12.91□□□□□ -0.34
CTNNA1-213ENST00000519113 TRGV1A0A0A0MS02 117 aa12.9□□□□□ -0.34
CTNNA1-213ENST00000519113 LOC105371267A0A1B0GV96 52 aa12.9□□□□□ -0.34
CTNNA1-213ENST00000519113 J3QL48 77 aa12.9□□□□□ -0.34
CTNNA1-213ENST00000519113 PAX4O43316 350 aa12.9□□□□□ -0.34
CTNNA1-213ENST00000519113 ZNF324O75467 553 aaPredicted RBP12.9□□□□□ -0.34
CTNNA1-213ENST00000519113 S100A4P26447 101 aaKnown RBP12.9□□□□□ -0.34
CTNNA1-213ENST00000519113 Q6ZSN1 163 aa12.9□□□□□ -0.34
CTNNA1-213ENST00000519113 GSN-AS1Q9NRJ2 163 aa12.9□□□□□ -0.34
CTNNA1-213ENST00000519113 SNRPEP62304 92 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-213ENST00000519113 CACNG7P62955 275 aa12.89□□□□□ -0.35
CTNNA1-213ENST00000519113 TWIST1Q15672 202 aa12.89□□□□□ -0.35
CTNNA1-213ENST00000519113 MUC21A0A0G2JKD1 596 aa12.88□□□□□ -0.35
CTNNA1-213ENST00000519113 MUC21A0A140T8X8 626 aa12.88□□□□□ -0.35
CTNNA1-213ENST00000519113 K7EP13 123 aa12.88□□□□□ -0.35
CTNNA1-213ENST00000519113 OR5AL1P0C617 328 aa12.88□□□□□ -0.35
CTNNA1-213ENST00000519113 SSTP61278 116 aa12.88□□□□□ -0.35
CTNNA1-213ENST00000519113 SLAQ13239 276 aa12.88□□□□□ -0.35
CTNNA1-213ENST00000519113 GATD1Q8NB37 220 aa12.88□□□□□ -0.35
CTNNA1-213ENST00000519113 SSBP4Q9BWG4 385 aaPredicted RBP12.88□□□□□ -0.35
CTNNA1-213ENST00000519113 C5orf52A6NGY3 159 aa12.87□□□□□ -0.35
CTNNA1-213ENST00000519113 H3BVH4 76 aa12.87□□□□□ -0.35
CTNNA1-213ENST00000519113 SNAI2O43623 268 aa12.87□□□□□ -0.35
CTNNA1-213ENST00000519113 NTF3P20783 257 aa12.87□□□□□ -0.35
CTNNA1-213ENST00000519113 KIAA1644Q3SXP7 199 aa12.87□□□□□ -0.35
CTNNA1-213ENST00000519113 DNLZQ5SXM8 178 aa12.87□□□□□ -0.35
CTNNA1-213ENST00000519113 LYPD5Q6UWN5 251 aa12.87□□□□□ -0.35
CTNNA1-213ENST00000519113 C11orf72Q8NBR9 251 aa12.87□□□□□ -0.35
CTNNA1-213ENST00000519113 CNFNQ9BYD5 112 aa12.87□□□□□ -0.35
CTNNA1-213ENST00000519113 MSRB1Q9NZV6 116 aa12.87□□□□□ -0.35
CTNNA1-213ENST00000519113 PRO0255Q9UI72 69 aa12.87□□□□□ -0.35
CTNNA1-213ENST00000519113 IGHV1OR15-1A0A075B7D0 117 aa12.86□□□□□ -0.35
CTNNA1-213ENST00000519113 GNRH2O43555 120 aa12.86□□□□□ -0.35
CTNNA1-213ENST00000519113 MRPL23Q16540 153 aaKnown RBP12.86□□□□□ -0.35
CTNNA1-213ENST00000519113 TDRG1Q3Y452 100 aa12.86□□□□□ -0.35
CTNNA1-213ENST00000519113 LINC00467Q9BRT7 94 aa12.86□□□□□ -0.35
CTNNA1-213ENST00000519113 SPANXN1Q5VSR9 72 aa12.85□□□□□ -0.35
CTNNA1-213ENST00000519113 TMEM70Q9BUB7 260 aa12.85□□□□□ -0.35
CTNNA1-213ENST00000519113 EVI2AP22794 236 aa12.84□□□□□ -0.35
CTNNA1-213ENST00000519113 SRIP30626 198 aa12.84□□□□□ -0.35
CTNNA1-213ENST00000519113 SMIM15Q7Z3B0 74 aa12.84□□□□□ -0.35
CTNNA1-213ENST00000519113 NEGR1Q7Z3B1 354 aa12.84□□□□□ -0.35
CTNNA1-213ENST00000519113 HHLA3Q9XRX5 114 aa12.84□□□□□ -0.35
CTNNA1-213ENST00000519113 PHLDA3Q9Y5J5 127 aa12.84□□□□□ -0.35
CTNNA1-213ENST00000519113 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
CTNNA1-213ENST00000519113 IGHV3-53P01767 116 aa12.83□□□□□ -0.36
CTNNA1-213ENST00000519113 CRYBA4P53673 196 aa12.83□□□□□ -0.36
CTNNA1-213ENST00000519113 COA6Q5JTJ3 125 aaKnown RBP12.83□□□□□ -0.36
CTNNA1-213ENST00000519113 OR10AG1Q8NH19 301 aa12.83□□□□□ -0.36
CTNNA1-213ENST00000519113 Q0VG73 95 aa12.82□□□□□ -0.36
CTNNA1-213ENST00000519113 TMEM191AQ9H0A3 160 aa12.82□□□□□ -0.36
CTNNA1-213ENST00000519113 IGLV5-52A0A0A0MRZ9 124 aa12.81□□□□□ -0.36
CTNNA1-213ENST00000519113 IGHV3-16A0A0C4DH30 117 aa12.81□□□□□ -0.36
CTNNA1-213ENST00000519113 RNASE3P12724 160 aaKnown RBP12.81□□□□□ -0.36
CTNNA1-213ENST00000519113 HAMPP81172 84 aa12.81□□□□□ -0.36
CTNNA1-213ENST00000519113 OR10J3Q5JRS4 329 aa12.81□□□□□ -0.36
CTNNA1-213ENST00000519113 FAM104BQ5XKR9 115 aa12.81□□□□□ -0.36
CTNNA1-213ENST00000519113 BAGE3Q86Y29 109 aa12.81□□□□□ -0.36
CTNNA1-213ENST00000519113 ALKBH7Q9BT30 221 aaPredicted RBP12.81□□□□□ -0.36
CTNNA1-213ENST00000519113 NTN5Q8WTR8 489 aaPredicted RBP12.8□□□□□ -0.36
CTNNA1-213ENST00000519113 TP53TG3Q9ULZ0 132 aa12.8□□□□□ -0.36
CTNNA1-213ENST00000519113 M0R381 172 aa12.79□□□□□ -0.36
CTNNA1-213ENST00000519113 S100A2P29034 98 aa12.79□□□□□ -0.36
CTNNA1-213ENST00000519113 FHL2Q14192 279 aa12.79□□□□□ -0.36
CTNNA1-213ENST00000519113 AMN1Q8IY45 258 aa12.79□□□□□ -0.36
CTNNA1-213ENST00000519113 C10orf126Q8N4M7 172 aa12.79□□□□□ -0.36
CTNNA1-213ENST00000519113 MRPL16Q9NX20 251 aaKnown RBP12.79□□□□□ -0.36
CTNNA1-213ENST00000519113 CRYGDP07320 174 aa12.78□□□□□ -0.36
CTNNA1-213ENST00000519113 DMRTA1Q5VZB9 504 aa12.78□□□□□ -0.36
CTNNA1-213ENST00000519113 WFDC10BQ8IUB3 73 aa12.78□□□□□ -0.36
CTNNA1-213ENST00000519113 C9orf85Q96MD7 179 aa12.78□□□□□ -0.36
CTNNA1-213ENST00000519113 TRGV4A0A0C4DH28 118 aa12.77□□□□□ -0.37
CTNNA1-213ENST00000519113 K7EQD1 137 aa12.77□□□□□ -0.37
CTNNA1-213ENST00000519113 PSCAO43653 123 aa12.77□□□□□ -0.37
CTNNA1-213ENST00000519113 MRPL51Q4U2R6 128 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms