RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 EP400Q96L91 3159 aa2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 COL1A2P08123 1366 aa2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 RGPD3A6NKT7 1758 aaPredicted RBP2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 RGPD4Q7Z3J3 1758 aa2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 CASZ1Q86V15 1759 aa2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 UBR3Q6ZT12 1888 aa2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 PLXNA4Q9HCM2 1894 aa2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 SHROOM3Q8TF72 1996 aa2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 MYO9BQ13459 2157 aa2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 MUC4Q99102 2169 aa2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 A0A1W2PRS3 328 aa2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 F8W1H4 67 aa2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 NDUFB6O95139 128 aa2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 IL7P13232 177 aa2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 S100A7L2Q5SY68 101 aa2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 TSKUQ8WUA8 353 aa2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 PATE1Q8WXA2 126 aa2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 TXNDC17Q9BRA2 123 aa2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 DDX60Q8IY21 1712 aaKnown RBP2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 TRPM7Q96QT4 1865 aa2.81□□□□□ -1.96
CTNNA1-202ENST00000517533 LAMB2P55268 1798 aa2.8□□□□□ -1.96
CTNNA1-202ENST00000517533 C4AP0C0L4 1744 aa2.8□□□□□ -1.96
CTNNA1-202ENST00000517533 CCL16O15467 120 aa2.8□□□□□ -1.96
CTNNA1-202ENST00000517533 IGKCP01834 107 aa2.8□□□□□ -1.96
CTNNA1-202ENST00000517533 RNASE3P12724 160 aaKnown RBP2.8□□□□□ -1.96
CTNNA1-202ENST00000517533 OR10AG1Q8NH19 301 aa2.8□□□□□ -1.96
CTNNA1-202ENST00000517533 SPANXDQ9BXN6 97 aa2.8□□□□□ -1.96
CTNNA1-202ENST00000517533 RP1P56715 2156 aa2.8□□□□□ -1.96
CTNNA1-202ENST00000517533 KIAA1549LQ6ZVL6 1849 aa2.79□□□□□ -1.96
CTNNA1-202ENST00000517533 TNS1Q9HBL0 1735 aaKnown RBP2.79□□□□□ -1.96
CTNNA1-202ENST00000517533 NPC2P61916 151 aa2.79□□□□□ -1.96
CTNNA1-202ENST00000517533 INSL4Q14641 139 aa2.79□□□□□ -1.96
CTNNA1-202ENST00000517533 C10orf55Q5SWW7 151 aa2.79□□□□□ -1.96
CTNNA1-202ENST00000517533 SPANXN1Q5VSR9 72 aa2.79□□□□□ -1.96
CTNNA1-202ENST00000517533 CSAG1Q6PB30 78 aa2.79□□□□□ -1.96
CTNNA1-202ENST00000517533 TTC9CQ8N5M4 171 aa2.79□□□□□ -1.96
CTNNA1-202ENST00000517533 Q8N8P6 123 aa2.79□□□□□ -1.96
CTNNA1-202ENST00000517533 ZNF431Q8TF32 576 aaPredicted RBP2.79□□□□□ -1.96
CTNNA1-202ENST00000517533 ORMDL1Q9P0S3 153 aa2.79□□□□□ -1.96
CTNNA1-202ENST00000517533 EML5Q05BV3 1969 aa2.79□□□□□ -1.96
CTNNA1-202ENST00000517533 C10orf71Q711Q0 1435 aa2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 IGKV1-17P01599 117 aa2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 GYPBP06028 91 aa2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 SLC25A6P12236 298 aa2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 PIPP12273 146 aaPredicted RBP2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 COX7CP15954 63 aa2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 POLR2JP52435 117 aaKnown RBP2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 COL5A1-AS1Q5SY13 56 aa2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 LIMD2Q9BT23 127 aa2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 QSER1Q2KHR3 1735 aa2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 ARAP2Q8WZ64 1704 aa2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 NRXN2Q9P2S2 1712 aa2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 TNRC6CQ9HCJ0 1690 aaKnown RBP2.78□□□□□ -1.96
CTNNA1-202ENST00000517533 MPDZO75970 2070 aa2.77□□□□□ -1.97
CTNNA1-202ENST00000517533 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
CTNNA1-202ENST00000517533 DUOX1Q9NRD9 1551 aa2.77□□□□□ -1.97
CTNNA1-202ENST00000517533 FREM3P0C091 2139 aa2.77□□□□□ -1.97
CTNNA1-202ENST00000517533 COL4A1P02462 1669 aa2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 IGKV1D-17A0A075B6S4 117 aa2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 TRAV2A0A0B4J234 112 aa2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 PVALEFA0A1B0GWK0 134 aa2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 IGHV3-33P01772 117 aa2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 UBE2G1P62253 170 aa2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 RBM3P98179 157 aaKnown RBP2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 RHOHQ15669 191 aa2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 IQCJQ1A5X6 159 aa2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 Q6ZRN7 208 aaPredicted RBP2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 C4orf3Q8WVX3 66 aa2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 TMEM141Q96I45 108 aa2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 LRRC37AA6NMS7 1700 aa2.76□□□□□ -1.97
CTNNA1-202ENST00000517533 ANK1P16157 1881 aa2.75□□□□□ -1.97
CTNNA1-202ENST00000517533 DOCK2Q92608 1830 aa2.75□□□□□ -1.97
CTNNA1-202ENST00000517533 MCM3APO60318 1980 aa2.75□□□□□ -1.97
CTNNA1-202ENST00000517533 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
CTNNA1-202ENST00000517533 COA5Q86WW8 74 aa2.75□□□□□ -1.97
CTNNA1-202ENST00000517533 REG4Q9BYZ8 158 aa2.75□□□□□ -1.97
CTNNA1-202ENST00000517533 CDC42SE1Q9NRR8 79 aa2.75□□□□□ -1.97
CTNNA1-202ENST00000517533 A0A1B0GUL6 1792 aa2.74□□□□□ -1.97
CTNNA1-202ENST00000517533 CXorf51AA0A1B0GTR3 108 aa2.74□□□□□ -1.97
CTNNA1-202ENST00000517533 TRBV6-4A0A1B0GX49 114 aa2.74□□□□□ -1.97
CTNNA1-202ENST00000517533 TMEM30CPA0ZSE6 113 aa2.74□□□□□ -1.97
CTNNA1-202ENST00000517533 H3BRM9 83 aa2.74□□□□□ -1.97
CTNNA1-202ENST00000517533 FAM74A1Q5RGS3 127 aa2.74□□□□□ -1.97
CTNNA1-202ENST00000517533 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
CTNNA1-202ENST00000517533 SLC48A1Q6P1K1 146 aa2.74□□□□□ -1.97
CTNNA1-202ENST00000517533 UNQ5815/PRO19632Q6UWF5 114 aa2.74□□□□□ -1.97
CTNNA1-202ENST00000517533 LYPD5Q6UWN5 251 aa2.74□□□□□ -1.97
CTNNA1-202ENST00000517533 C15orf53Q8NAA6 179 aa2.74□□□□□ -1.97
CTNNA1-202ENST00000517533 C12orf73Q69YU5 71 aa2.73□□□□□ -1.97
CTNNA1-202ENST00000517533 PPDPFLQ8WWR9 84 aa2.73□□□□□ -1.97
CTNNA1-202ENST00000517533 CEP192Q8TEP8 1941 aa2.73□□□□□ -1.97
CTNNA1-202ENST00000517533 TIAM2Q8IVF5 1701 aa2.73□□□□□ -1.97
CTNNA1-202ENST00000517533 KIAA1551Q9HCM1 1747 aa2.73□□□□□ -1.97
CTNNA1-202ENST00000517533 CITO14578 2027 aa2.73□□□□□ -1.97
CTNNA1-202ENST00000517533 PLIN4Q96Q06 1357 aa2.73□□□□□ -1.97
CTNNA1-202ENST00000517533 RBBP6Q7Z6E9 1792 aaKnown RBP2.72□□□□□ -1.97
CTNNA1-202ENST00000517533 DLEC1Q9Y238 1755 aa2.72□□□□□ -1.97
CTNNA1-202ENST00000517533 TRBV6-5A0A0K0K1A5 114 aa2.72□□□□□ -1.97
CTNNA1-202ENST00000517533 FAM24AA6NFZ4 105 aa2.72□□□□□ -1.97
CTNNA1-202ENST00000517533 AQP10Q96PS8 301 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms