RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 URGCP-MRPS24S4R325 110 aa13.07□□□□□ -0.32
LMNA-225ENST00000515824 EREGO14944 169 aa13.06□□□□□ -0.32
LMNA-225ENST00000515824 CT83Q5H943 113 aa13.06□□□□□ -0.32
LMNA-225ENST00000515824 SPATA12Q7Z6I5 190 aa13.06□□□□□ -0.32
LMNA-225ENST00000515824 GTSF1Q8WW33 167 aa13.06□□□□□ -0.32
LMNA-225ENST00000515824 DPH3P1Q9H4G8 78 aa13.06□□□□□ -0.32
LMNA-225ENST00000515824 SMDT1Q9H4I9 107 aa13.06□□□□□ -0.32
LMNA-225ENST00000515824 C16orf90A8MZG2 172 aa13.05□□□□□ -0.32
LMNA-225ENST00000515824 M0QY20 66 aa13.05□□□□□ -0.32
LMNA-225ENST00000515824 DNAJC30Q96LL9 226 aa13.05□□□□□ -0.32
LMNA-225ENST00000515824 LAGE3Q14657 143 aa13.04□□□□□ -0.32
LMNA-225ENST00000515824 TMEM241Q24JQ0 296 aa13.04□□□□□ -0.32
LMNA-225ENST00000515824 SUMO4Q6EEV6 95 aa13.04□□□□□ -0.32
LMNA-225ENST00000515824 KCNIP4Q6PIL6 250 aa13.04□□□□□ -0.32
LMNA-225ENST00000515824 SMIM15Q7Z3B0 74 aa13.04□□□□□ -0.32
LMNA-225ENST00000515824 DAZ4Q86SG3 579 aaKnown RBP13.04□□□□□ -0.32
LMNA-225ENST00000515824 NIT1Q86X76 327 aa13.04□□□□□ -0.32
LMNA-225ENST00000515824 DAZ3Q9NR90 486 aaKnown RBP13.04□□□□□ -0.32
LMNA-225ENST00000515824 OSTCQ9NRP0 149 aa13.04□□□□□ -0.32
LMNA-225ENST00000515824 TRBV6-8A0A0A6YYG3 113 aa13.03□□□□□ -0.32
LMNA-225ENST00000515824 PSCAO43653 123 aa13.03□□□□□ -0.32
LMNA-225ENST00000515824 FOXA3P55318 350 aaPredicted RBP13.03□□□□□ -0.32
LMNA-225ENST00000515824 TMEM97Q5BJF2 176 aa13.03□□□□□ -0.32
LMNA-225ENST00000515824 Q8N3U1 123 aa13.03□□□□□ -0.32
LMNA-225ENST00000515824 Q9HAA7 133 aa13.03□□□□□ -0.32
LMNA-225ENST00000515824 LRP1BQ9NZR2 4599 aa13.02□□□□□ -0.33
LMNA-225ENST00000515824 A0A087WX48 190 aa13.02□□□□□ -0.33
LMNA-225ENST00000515824 C15orf54Q8N8G6 183 aa13.02□□□□□ -0.33
LMNA-225ENST00000515824 PGLYRP4Q96LB8 373 aa13.02□□□□□ -0.33
LMNA-225ENST00000515824 A0A087WTM6 91 aa13.01□□□□□ -0.33
LMNA-225ENST00000515824 TRAV8-3A0A0A6YYJ7 113 aa13.01□□□□□ -0.33
LMNA-225ENST00000515824 C9JQL5 133 aa13.01□□□□□ -0.33
LMNA-225ENST00000515824 TMEM262E9PQX1 116 aa13.01□□□□□ -0.33
LMNA-225ENST00000515824 SRSF3P84103 164 aaKnown RBP13.01□□□□□ -0.33
LMNA-225ENST00000515824 RASL11AQ6T310 242 aa13.01□□□□□ -0.33
LMNA-225ENST00000515824 BORCS7Q96B45 105 aa13.01□□□□□ -0.33
LMNA-225ENST00000515824 CHCHD7Q9BUK0 85 aa13.01□□□□□ -0.33
LMNA-225ENST00000515824 NAT8Q9UHE5 227 aa13.01□□□□□ -0.33
LMNA-225ENST00000515824 KRTAP10-2P60368 255 aa13□□□□□ -0.33
LMNA-225ENST00000515824 RAB14P61106 215 aa13□□□□□ -0.33
LMNA-225ENST00000515824 ELOBQ15370 118 aa13□□□□□ -0.33
LMNA-225ENST00000515824 TSKUQ8WUA8 353 aa13□□□□□ -0.33
LMNA-225ENST00000515824 TM2D2Q9BX73 214 aa13□□□□□ -0.33
LMNA-225ENST00000515824 GFRA4Q9GZZ7 299 aa13□□□□□ -0.33
LMNA-225ENST00000515824 NIT2Q9NQR4 276 aa13□□□□□ -0.33
LMNA-225ENST00000515824 DNAH5Q8TE73 4624 aa12.99□□□□□ -0.33
LMNA-225ENST00000515824 FAM231BA6NCW3 169 aa12.99□□□□□ -0.33
LMNA-225ENST00000515824 RPL23P62829 140 aaKnown RBP12.99□□□□□ -0.33
LMNA-225ENST00000515824 ISOC2Q96AB3 205 aa12.99□□□□□ -0.33
LMNA-225ENST00000515824 PGPEP1Q9NXJ5 209 aa12.99□□□□□ -0.33
LMNA-225ENST00000515824 HIGD1CA8MV81 97 aa12.98□□□□□ -0.33
LMNA-225ENST00000515824 PKIAP61925 76 aa12.98□□□□□ -0.33
LMNA-225ENST00000515824 ADIRFQ15847 76 aa12.98□□□□□ -0.33
LMNA-225ENST00000515824 FRZBQ92765 325 aa12.98□□□□□ -0.33
LMNA-225ENST00000515824 CHCHD5Q9BSY4 110 aa12.98□□□□□ -0.33
LMNA-225ENST00000515824 NTM-AS1Q6ZSK4 140 aa12.97□□□□□ -0.33
LMNA-225ENST00000515824 KLK12Q9UKR0 248 aa12.97□□□□□ -0.33
LMNA-225ENST00000515824 KIAA1109Q2LD37 5005 aa12.97□□□□□ -0.33
LMNA-225ENST00000515824 HERC2O95714 4834 aa12.96□□□□□ -0.33
LMNA-225ENST00000515824 TRBV25-1A0A075B6N4 114 aa12.96□□□□□ -0.33
LMNA-225ENST00000515824 A0A1B0GUT8 65 aa12.96□□□□□ -0.33
LMNA-225ENST00000515824 V9GYV3 84 aa12.96□□□□□ -0.33
LMNA-225ENST00000515824 GATD1Q8NB37 220 aa12.95□□□□□ -0.34
LMNA-225ENST00000515824 RMI2Q96E14 147 aa12.95□□□□□ -0.34
LMNA-225ENST00000515824 COX11Q9Y6N1 276 aa12.95□□□□□ -0.34
LMNA-225ENST00000515824 IGHV1-24A0A0C4DH33 117 aa12.94□□□□□ -0.34
LMNA-225ENST00000515824 UBE2WQ96B02 151 aa12.94□□□□□ -0.34
LMNA-225ENST00000515824 TRAV26-2A0A0B4J265 109 aa12.93□□□□□ -0.34
LMNA-225ENST00000515824 LRCOL1A6NCL2 159 aa12.93□□□□□ -0.34
LMNA-225ENST00000515824 IQCJQ1A5X6 159 aa12.93□□□□□ -0.34
LMNA-225ENST00000515824 CDPF1Q6NVV7 123 aa12.93□□□□□ -0.34
LMNA-225ENST00000515824 NUP35Q8NFH5 326 aa12.93□□□□□ -0.34
LMNA-225ENST00000515824 Q0VG73 95 aa12.92□□□□□ -0.34
LMNA-225ENST00000515824 RIGQ13278 110 aa12.92□□□□□ -0.34
LMNA-225ENST00000515824 MPV17L2Q567V2 206 aa12.92□□□□□ -0.34
LMNA-225ENST00000515824 ATRAIDQ6UW56 229 aa12.92□□□□□ -0.34
LMNA-225ENST00000515824 TMEM191AQ9H0A3 160 aa12.92□□□□□ -0.34
LMNA-225ENST00000515824 NAT8BQ9UHF3 227 aa12.92□□□□□ -0.34
LMNA-225ENST00000515824 GAGE6Q13070 117 aa12.91□□□□□ -0.34
LMNA-225ENST00000515824 IGKV2D-24A0A075B6R9 120 aa12.9□□□□□ -0.34
LMNA-225ENST00000515824 CRPP02741 224 aa12.9□□□□□ -0.34
LMNA-225ENST00000515824 ANGP03950 147 aaKnown RBP12.9□□□□□ -0.34
LMNA-225ENST00000515824 COTL1Q14019 142 aa12.9□□□□□ -0.34
LMNA-225ENST00000515824 FUSP35637 526 aaKnown RBP eCLIP12.89□□□□□ -0.35
LMNA-225ENST00000515824 Q8N976 141 aa12.89□□□□□ -0.35
LMNA-225ENST00000515824 RPL39LQ96EH5 51 aaKnown RBP12.89□□□□□ -0.35
LMNA-225ENST00000515824 TMEM243Q9BU79 118 aa12.89□□□□□ -0.35
LMNA-225ENST00000515824 SMIM27A0A1W2PRY6 76 aa12.88□□□□□ -0.35
LMNA-225ENST00000515824 CDK2AP2O75956 126 aa12.88□□□□□ -0.35
LMNA-225ENST00000515824 RBX1P62877 108 aa12.88□□□□□ -0.35
LMNA-225ENST00000515824 CLLU1Q5K131 121 aa12.88□□□□□ -0.35
LMNA-225ENST00000515824 APOBP04114 4563 aaKnown RBP12.88□□□□□ -0.35
LMNA-225ENST00000515824 HSPG2P98160 4391 aa12.87□□□□□ -0.35
LMNA-225ENST00000515824 ENHOQ6UWT2 76 aa12.87□□□□□ -0.35
LMNA-225ENST00000515824 Q8N814 137 aa12.87□□□□□ -0.35
LMNA-225ENST00000515824 DEFB104AQ8WTQ1 72 aa12.87□□□□□ -0.35
LMNA-225ENST00000515824 NTN5Q8WTR8 489 aaPredicted RBP12.87□□□□□ -0.35
LMNA-225ENST00000515824 RYR1P21817 5038 aa12.86□□□□□ -0.35
LMNA-225ENST00000515824 UBE2L6O14933 153 aa12.86□□□□□ -0.35
LMNA-225ENST00000515824 RAB4AP20338 218 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms