RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 PLCE1Q9P212 2302 aa9.54□□□□□ -0.88
SMAD1-215ENST00000515385 IGLV4-3A0A075B6K6 122 aa9.53□□□□□ -0.88
SMAD1-215ENST00000515385 IGHV3-49A0A0A0MS15 119 aa9.53□□□□□ -0.88
SMAD1-215ENST00000515385 MRPS36P82909 103 aaKnown RBP9.53□□□□□ -0.88
SMAD1-215ENST00000515385 IGFL3Q6UXB1 125 aa9.53□□□□□ -0.88
SMAD1-215ENST00000515385 KLK5Q9Y337 293 aaPredicted RBP9.53□□□□□ -0.88
SMAD1-215ENST00000515385 ZGRF1Q86YA3 2104 aa9.53□□□□□ -0.88
SMAD1-215ENST00000515385 SEC61GP60059 68 aa9.52□□□□□ -0.88
SMAD1-215ENST00000515385 C4orf26Q17RF5 130 aa9.52□□□□□ -0.88
SMAD1-215ENST00000515385 C2orf48Q96LS8 159 aa9.52□□□□□ -0.88
SMAD1-215ENST00000515385 FREM2Q5SZK8 3169 aa9.52□□□□□ -0.89
SMAD1-215ENST00000515385 SOCS3O14543 225 aa9.52□□□□□ -0.89
SMAD1-215ENST00000515385 HIST1H4AP62805 103 aaKnown RBP9.52□□□□□ -0.89
SMAD1-215ENST00000515385 ECSCRQ19T08 205 aa9.52□□□□□ -0.89
SMAD1-215ENST00000515385 ADAMTSL4-AS1Q5T5F5 129 aa9.52□□□□□ -0.89
SMAD1-215ENST00000515385 HRCT1Q6UXD1 115 aa9.52□□□□□ -0.89
SMAD1-215ENST00000515385 SMCR5Q8TEV8 140 aa9.52□□□□□ -0.89
SMAD1-215ENST00000515385 OPRPNQ99935 248 aaPredicted RBP9.52□□□□□ -0.89
SMAD1-215ENST00000515385 COX7A2LO14548 114 aa9.51□□□□□ -0.89
SMAD1-215ENST00000515385 INAFM2P0DMQ5 153 aa9.51□□□□□ -0.89
SMAD1-215ENST00000515385 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
SMAD1-215ENST00000515385 M0QY20 66 aa9.51□□□□□ -0.89
SMAD1-215ENST00000515385 RS1O15537 224 aa9.51□□□□□ -0.89
SMAD1-215ENST00000515385 DEFB109BQ30KR1 87 aa9.51□□□□□ -0.89
SMAD1-215ENST00000515385 COPS9Q8WXC6 57 aa9.51□□□□□ -0.89
SMAD1-215ENST00000515385 URB1O60287 2271 aaKnown RBP9.5□□□□□ -0.89
SMAD1-215ENST00000515385 A0A087WWL8 130 aa9.5□□□□□ -0.89
SMAD1-215ENST00000515385 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
SMAD1-215ENST00000515385 JPT2Q9H910 190 aa9.5□□□□□ -0.89
SMAD1-215ENST00000515385 KLLNB2CW77 178 aa9.49□□□□□ -0.89
SMAD1-215ENST00000515385 LYNX1G3V0Z9 82 aa9.49□□□□□ -0.89
SMAD1-215ENST00000515385 ATP6V0E1O15342 81 aa9.49□□□□□ -0.89
SMAD1-215ENST00000515385 LYNX1P0DP58 116 aa9.49□□□□□ -0.89
SMAD1-215ENST00000515385 VSIG2Q96IQ7 327 aa9.49□□□□□ -0.89
SMAD1-215ENST00000515385 ADARB2-AS1A8MUL3 147 aa9.48□□□□□ -0.89
SMAD1-215ENST00000515385 CIRBPQ14011 172 aaKnown RBP9.48□□□□□ -0.89
SMAD1-215ENST00000515385 ZNF580Q9UK33 172 aa9.48□□□□□ -0.89
SMAD1-215ENST00000515385 FAM223BA6NKX1 122 aa9.47□□□□□ -0.89
SMAD1-215ENST00000515385 FAM223AQ8IWN6 122 aa9.47□□□□□ -0.89
SMAD1-215ENST00000515385 DEFB104AQ8WTQ1 72 aa9.47□□□□□ -0.89
SMAD1-215ENST00000515385 CD28P10747 220 aa9.47□□□□□ -0.89
SMAD1-215ENST00000515385 RPL11P62913 178 aaKnown RBP9.47□□□□□ -0.89
SMAD1-215ENST00000515385 DAZ2Q13117 558 aaKnown RBP9.47□□□□□ -0.89
SMAD1-215ENST00000515385 DAZ4Q86SG3 579 aaKnown RBP9.47□□□□□ -0.89
SMAD1-215ENST00000515385 C9orf85Q96MD7 179 aa9.47□□□□□ -0.89
SMAD1-215ENST00000515385 PRORYQ9H606 182 aa9.47□□□□□ -0.89
SMAD1-215ENST00000515385 DAZ1Q9NQZ3 744 aaKnown RBP9.47□□□□□ -0.89
SMAD1-215ENST00000515385 DAZ3Q9NR90 486 aaKnown RBP9.47□□□□□ -0.89
SMAD1-215ENST00000515385 NDUFA4O00483 81 aa9.46□□□□□ -0.89
SMAD1-215ENST00000515385 RPL18AQ02543 176 aaKnown RBP9.46□□□□□ -0.9
SMAD1-215ENST00000515385 Q6ZSV7 163 aa9.46□□□□□ -0.9
SMAD1-215ENST00000515385 ZNF318Q5VUA4 2279 aa9.46□□□□□ -0.9
SMAD1-215ENST00000515385 VPS13AQ96RL7 3174 aa9.46□□□□□ -0.9
SMAD1-215ENST00000515385 BAALC-AS2P0C853 105 aa9.45□□□□□ -0.9
SMAD1-215ENST00000515385 PLA2G2CQ5R387 149 aa9.45□□□□□ -0.9
SMAD1-215ENST00000515385 FAM74A4Q5TZK3 123 aa9.45□□□□□ -0.9
SMAD1-215ENST00000515385 PRUNE2Q8WUY3 3088 aa9.44□□□□□ -0.9
SMAD1-215ENST00000515385 NDUFA1O15239 70 aa9.44□□□□□ -0.9
SMAD1-215ENST00000515385 OXTP01178 125 aa9.44□□□□□ -0.9
SMAD1-215ENST00000515385 ZNF415Q09FC8 603 aa9.44□□□□□ -0.9
SMAD1-215ENST00000515385 IGHV3-16A0A0C4DH30 117 aa9.44□□□□□ -0.9
SMAD1-215ENST00000515385 hADV29S1A0JD25 119 aa9.44□□□□□ -0.9
SMAD1-215ENST00000515385 TIRAPP58753 221 aa9.44□□□□□ -0.9
SMAD1-215ENST00000515385 V9GYY9 64 aa9.44□□□□□ -0.9
SMAD1-215ENST00000515385 TRAV41A0A0B4J266 112 aa9.43□□□□□ -0.9
SMAD1-215ENST00000515385 G3V318 75 aa9.43□□□□□ -0.9
SMAD1-215ENST00000515385 NPC2P61916 151 aa9.43□□□□□ -0.9
SMAD1-215ENST00000515385 BEAN1Q3B7T3 259 aa9.43□□□□□ -0.9
SMAD1-215ENST00000515385 SERP2Q8N6R1 65 aa9.43□□□□□ -0.9
SMAD1-215ENST00000515385 TRAV13-1A0A0B4J241 112 aa9.43□□□□□ -0.9
SMAD1-215ENST00000515385 NDUFC2-KCTD14E9PQ53 114 aa9.43□□□□□ -0.9
SMAD1-215ENST00000515385 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
SMAD1-215ENST00000515385 TTC28Q96AY4 2481 aa9.42□□□□□ -0.9
SMAD1-215ENST00000515385 F6UB75 175 aa9.42□□□□□ -0.9
SMAD1-215ENST00000515385 LINC00308Q8TCZ7 52 aa9.42□□□□□ -0.9
SMAD1-215ENST00000515385 EYSQ5T1H1 3165 aa9.42□□□□□ -0.9
SMAD1-215ENST00000515385 TMEM86BQ8N661 226 aa9.41□□□□□ -0.9
SMAD1-215ENST00000515385 OVOL2Q9BRP0 275 aa9.41□□□□□ -0.9
SMAD1-215ENST00000515385 MUC4Q99102 2169 aa9.41□□□□□ -0.9
SMAD1-215ENST00000515385 DEFB1P60022 68 aa9.41□□□□□ -0.9
SMAD1-215ENST00000515385 Q6JHZ5 121 aa9.41□□□□□ -0.9
SMAD1-215ENST00000515385 FAM104AQ969W3 186 aa9.41□□□□□ -0.9
SMAD1-215ENST00000515385 NCOR1O75376 2440 aa9.4□□□□□ -0.9
SMAD1-215ENST00000515385 IGHV3OR16-10A0A075B7F0 116 aa9.4□□□□□ -0.91
SMAD1-215ENST00000515385 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.4□□□□□ -0.91
SMAD1-215ENST00000515385 PSMB8P28062 276 aa9.4□□□□□ -0.91
SMAD1-215ENST00000515385 UPK3BQ9BT76 320 aa9.4□□□□□ -0.91
SMAD1-215ENST00000515385 TRAV12-3A0A0B4J271 114 aa9.39□□□□□ -0.91
SMAD1-215ENST00000515385 PFN2P35080 140 aa9.39□□□□□ -0.91
SMAD1-215ENST00000515385 UNQ9165/PRO28630Q6UXU0 137 aa9.39□□□□□ -0.91
SMAD1-215ENST00000515385 CELSR3Q9NYQ7 3312 aa9.39□□□□□ -0.91
SMAD1-215ENST00000515385 IGLV5-45A0A087WSX0 123 aa9.38□□□□□ -0.91
SMAD1-215ENST00000515385 EPM2AB3EWF7 344 aa9.38□□□□□ -0.91
SMAD1-215ENST00000515385 C19orf54Q5BKX5 351 aa9.38□□□□□ -0.91
SMAD1-215ENST00000515385 C22orf24Q9Y442 160 aa9.38□□□□□ -0.91
SMAD1-215ENST00000515385 PF4P02776 101 aa9.38□□□□□ -0.91
SMAD1-215ENST00000515385 RPL35AP18077 110 aaKnown RBP9.38□□□□□ -0.91
SMAD1-215ENST00000515385 PRIMA1Q86XR5 153 aa9.38□□□□□ -0.91
SMAD1-215ENST00000515385 DNAL4O96015 105 aa9.37□□□□□ -0.91
SMAD1-215ENST00000515385 C5orf56Q8N8D9 126 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms