RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 BIN3Q9NQY0 253 aa12.62□□□□□ -0.39
LPCAT1-206ENST00000514484 PGPEP1Q9NXJ5 209 aa12.62□□□□□ -0.39
LPCAT1-206ENST00000514484 URGCP-MRPS24S4R325 110 aa12.62□□□□□ -0.39
LPCAT1-206ENST00000514484 ABCA13Q86UQ4 5058 aa12.62□□□□□ -0.39
LPCAT1-206ENST00000514484 CDPF1Q6NVV7 123 aa12.61□□□□□ -0.39
LPCAT1-206ENST00000514484 MAPKAPK5-AS1Q8N8E1 139 aa12.61□□□□□ -0.39
LPCAT1-206ENST00000514484 CACNG7P62955 275 aa12.6□□□□□ -0.39
LPCAT1-206ENST00000514484 RPP21Q9H633 154 aaKnown RBP12.6□□□□□ -0.39
LPCAT1-206ENST00000514484 TMEM250H0YL14 139 aa12.59□□□□□ -0.39
LPCAT1-206ENST00000514484 WFDC2Q14508 124 aa12.59□□□□□ -0.39
LPCAT1-206ENST00000514484 KLK12Q9UKR0 248 aa12.59□□□□□ -0.39
LPCAT1-206ENST00000514484 A0A087WX48 190 aa12.58□□□□□ -0.4
LPCAT1-206ENST00000514484 TRBV6-8A0A0A6YYG3 113 aa12.58□□□□□ -0.4
LPCAT1-206ENST00000514484 CTRLP40313 264 aa12.58□□□□□ -0.4
LPCAT1-206ENST00000514484 KRTAP10-1P60331 282 aa12.58□□□□□ -0.4
LPCAT1-206ENST00000514484 SUMO4Q6EEV6 95 aa12.58□□□□□ -0.4
LPCAT1-206ENST00000514484 TRAV8-3A0A0A6YYJ7 113 aa12.57□□□□□ -0.4
LPCAT1-206ENST00000514484 F2Z2F3 143 aa12.57□□□□□ -0.4
LPCAT1-206ENST00000514484 LECT2O14960 151 aa12.57□□□□□ -0.4
LPCAT1-206ENST00000514484 NTF3P20783 257 aa12.57□□□□□ -0.4
LPCAT1-206ENST00000514484 TM2D2Q9BX73 214 aa12.57□□□□□ -0.4
LPCAT1-206ENST00000514484 EIF5A2Q9GZV4 153 aaKnown RBP12.57□□□□□ -0.4
LPCAT1-206ENST00000514484 TMEM262E9PQX1 116 aa12.56□□□□□ -0.4
LPCAT1-206ENST00000514484 M0QY20 66 aa12.56□□□□□ -0.4
LPCAT1-206ENST00000514484 TRGC1P0CF51 173 aa12.56□□□□□ -0.4
LPCAT1-206ENST00000514484 Q8N814 137 aa12.56□□□□□ -0.4
LPCAT1-206ENST00000514484 IGLV5-52A0A0A0MRZ9 124 aa12.55□□□□□ -0.4
LPCAT1-206ENST00000514484 MPV17L2Q567V2 206 aa12.55□□□□□ -0.4
LPCAT1-206ENST00000514484 KCNIP4Q6PIL6 250 aa12.55□□□□□ -0.4
LPCAT1-206ENST00000514484 NTM-AS1Q6ZSK4 140 aa12.55□□□□□ -0.4
LPCAT1-206ENST00000514484 UBE2WQ96B02 151 aa12.55□□□□□ -0.4
LPCAT1-206ENST00000514484 FAM210AQ96ND0 272 aa12.55□□□□□ -0.4
LPCAT1-206ENST00000514484 CHCHD5Q9BSY4 110 aa12.55□□□□□ -0.4
LPCAT1-206ENST00000514484 IGKV2D-24A0A075B6R9 120 aa12.54□□□□□ -0.4
LPCAT1-206ENST00000514484 TWIST1Q15672 202 aa12.54□□□□□ -0.4
LPCAT1-206ENST00000514484 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.54□□□□□ -0.4
LPCAT1-206ENST00000514484 GTSF1Q8WW33 167 aa12.54□□□□□ -0.4
LPCAT1-206ENST00000514484 SMIM7Q9BQ49 75 aa12.54□□□□□ -0.4
LPCAT1-206ENST00000514484 DPH3P1Q9H4G8 78 aa12.54□□□□□ -0.4
LPCAT1-206ENST00000514484 GATCO43716 136 aaKnown RBP12.53□□□□□ -0.4
LPCAT1-206ENST00000514484 GCSHP23434 173 aa12.53□□□□□ -0.4
LPCAT1-206ENST00000514484 C15orf54Q8N8G6 183 aa12.53□□□□□ -0.4
LPCAT1-206ENST00000514484 CHCHD7Q9BUK0 85 aa12.53□□□□□ -0.4
LPCAT1-206ENST00000514484 H7C1H1 209 aa12.52□□□□□ -0.41
LPCAT1-206ENST00000514484 DEFB104AQ8WTQ1 72 aa12.52□□□□□ -0.41
LPCAT1-206ENST00000514484 BAALCQ8WXS3 180 aa12.52□□□□□ -0.41
LPCAT1-206ENST00000514484 CNFNQ9BYD5 112 aa12.52□□□□□ -0.41
LPCAT1-206ENST00000514484 SRP19P09132 144 aaKnown RBP12.51□□□□□ -0.41
LPCAT1-206ENST00000514484 HAMPP81172 84 aa12.51□□□□□ -0.41
LPCAT1-206ENST00000514484 GAGE6Q13070 117 aa12.51□□□□□ -0.41
LPCAT1-206ENST00000514484 RASL11AQ6T310 242 aa12.51□□□□□ -0.41
LPCAT1-206ENST00000514484 Q8N1X5 172 aa12.51□□□□□ -0.41
LPCAT1-206ENST00000514484 Q8N976 141 aa12.51□□□□□ -0.41
LPCAT1-206ENST00000514484 NTN5Q8WTR8 489 aaPredicted RBP12.51□□□□□ -0.41
LPCAT1-206ENST00000514484 TRBV25-1A0A075B6N4 114 aa12.5□□□□□ -0.41
LPCAT1-206ENST00000514484 TRAV26-2A0A0B4J265 109 aa12.5□□□□□ -0.41
LPCAT1-206ENST00000514484 ANGP03950 147 aaKnown RBP12.5□□□□□ -0.41
LPCAT1-206ENST00000514484 XGP55808 180 aa12.5□□□□□ -0.41
LPCAT1-206ENST00000514484 ELOBQ15370 118 aa12.5□□□□□ -0.41
LPCAT1-206ENST00000514484 WDR73Q6P4I2 378 aa12.5□□□□□ -0.41
LPCAT1-206ENST00000514484 FAM231DQ6ZW35 169 aa12.5□□□□□ -0.41
LPCAT1-206ENST00000514484 RMI2Q96E14 147 aa12.5□□□□□ -0.41
LPCAT1-206ENST00000514484 PGLYRP4Q96LB8 373 aa12.5□□□□□ -0.41
LPCAT1-206ENST00000514484 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.49□□□□□ -0.41
LPCAT1-206ENST00000514484 ZNF727A8MUV8 499 aa12.49□□□□□ -0.41
LPCAT1-206ENST00000514484 FOXA3P55318 350 aaPredicted RBP12.49□□□□□ -0.41
LPCAT1-206ENST00000514484 TMEM97Q5BJF2 176 aa12.49□□□□□ -0.41
LPCAT1-206ENST00000514484 ATRAIDQ6UW56 229 aa12.49□□□□□ -0.41
LPCAT1-206ENST00000514484 CLPSL2Q6UWE3 100 aa12.49□□□□□ -0.41
LPCAT1-206ENST00000514484 ENHOQ6UWT2 76 aa12.49□□□□□ -0.41
LPCAT1-206ENST00000514484 LINC01551Q86U37 167 aa12.49□□□□□ -0.41
LPCAT1-206ENST00000514484 CRPP02741 224 aa12.48□□□□□ -0.41
LPCAT1-206ENST00000514484 DNAH8Q96JB1 4490 aa12.47□□□□□ -0.41
LPCAT1-206ENST00000514484 IGHV1-24A0A0C4DH33 117 aa12.47□□□□□ -0.41
LPCAT1-206ENST00000514484 A8MWL6 223 aa12.47□□□□□ -0.41
LPCAT1-206ENST00000514484 RBX1P62877 108 aa12.47□□□□□ -0.41
LPCAT1-206ENST00000514484 IQCJQ1A5X6 159 aa12.47□□□□□ -0.41
LPCAT1-206ENST00000514484 GATD1Q8NB37 220 aa12.47□□□□□ -0.41
LPCAT1-206ENST00000514484 NIT2Q9NQR4 276 aa12.47□□□□□ -0.41
LPCAT1-206ENST00000514484 COX11Q9Y6N1 276 aa12.47□□□□□ -0.41
LPCAT1-206ENST00000514484 NDUFS6O75380 124 aaKnown RBP12.46□□□□□ -0.41
LPCAT1-206ENST00000514484 Q0VG73 95 aa12.46□□□□□ -0.41
LPCAT1-206ENST00000514484 RPL39LQ96EH5 51 aaKnown RBP12.46□□□□□ -0.41
LPCAT1-206ENST00000514484 C9JQL5 133 aa12.45□□□□□ -0.42
LPCAT1-206ENST00000514484 PKIAP61925 76 aa12.45□□□□□ -0.42
LPCAT1-206ENST00000514484 CT83Q5H943 113 aa12.45□□□□□ -0.42
LPCAT1-206ENST00000514484 TEX261Q6UWH6 196 aa12.45□□□□□ -0.42
LPCAT1-206ENST00000514484 C1orf43Q9BWL3 253 aa12.45□□□□□ -0.42
LPCAT1-206ENST00000514484 SRSF3P84103 164 aaKnown RBP12.44□□□□□ -0.42
LPCAT1-206ENST00000514484 SMIM15Q7Z3B0 74 aa12.44□□□□□ -0.42
LPCAT1-206ENST00000514484 TMEM243Q9BU79 118 aa12.44□□□□□ -0.42
LPCAT1-206ENST00000514484 HIGD1CA8MV81 97 aa12.43□□□□□ -0.42
LPCAT1-206ENST00000514484 LINC01620Q4KN68 170 aa12.43□□□□□ -0.42
LPCAT1-206ENST00000514484 LINC00269Q8N2A0 174 aa12.43□□□□□ -0.42
LPCAT1-206ENST00000514484 FAT1Q14517 4588 aa12.43□□□□□ -0.42
LPCAT1-206ENST00000514484 HLA-DQA1P01909 254 aa12.42□□□□□ -0.42
LPCAT1-206ENST00000514484 TSKUQ8WUA8 353 aa12.42□□□□□ -0.42
LPCAT1-206ENST00000514484 OSTCQ9NRP0 149 aa12.42□□□□□ -0.42
LPCAT1-206ENST00000514484 FAM30AQ9NZY2 134 aa12.42□□□□□ -0.42
LPCAT1-206ENST00000514484 AMTP48728 403 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms