RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 ZNF503-AS2A6NEH8 195 aa5.22□□□□□ -1.57
NIPBL-208ENST00000514335 WDR87Q6ZQQ6 2873 aa5.22□□□□□ -1.57
NIPBL-208ENST00000514335 TRAV23DV6A0A075B6W5 121 aa5.21□□□□□ -1.57
NIPBL-208ENST00000514335 TRAV40A0A0B4J280 105 aa5.21□□□□□ -1.57
NIPBL-208ENST00000514335 PRM2P04554 102 aa5.21□□□□□ -1.57
NIPBL-208ENST00000514335 IGHV4-34P06331 123 aa5.21□□□□□ -1.57
NIPBL-208ENST00000514335 FXYD4P59646 89 aa5.21□□□□□ -1.57
NIPBL-208ENST00000514335 PATE2Q6UY27 113 aa5.21□□□□□ -1.57
NIPBL-208ENST00000514335 TMEM61Q8N0U2 210 aa5.21□□□□□ -1.57
NIPBL-208ENST00000514335 MYO18BQ8IUG5 2567 aa5.21□□□□□ -1.58
NIPBL-208ENST00000514335 FREM3P0C091 2139 aa5.21□□□□□ -1.58
NIPBL-208ENST00000514335 Q6JHZ5 121 aa5.21□□□□□ -1.58
NIPBL-208ENST00000514335 ARHGAP5-AS1Q96IT6 56 aa5.21□□□□□ -1.58
NIPBL-208ENST00000514335 B4DSR2 109 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 INAFM1C9JVW0 142 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 PRSS1P07477 247 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 IAPPP10997 89 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 S100A4P26447 101 aaKnown RBP5.2□□□□□ -1.58
NIPBL-208ENST00000514335 LMO4P61968 165 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 ATP1A1-AS1Q5TC04 95 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 DAND5Q8N907 189 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 GOLGA2P5Q9HBQ8 144 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 NDUFA12Q9UI09 145 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 TFF3Q07654 80 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 TRAV22A0A0B4J277 110 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 LY6G6EA0A0G2JKS1 128 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 EIF4EBP3O60516 100 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-208ENST00000514335 U3KQA8 63 aa5.2□□□□□ -1.58
NIPBL-208ENST00000514335 IGLV3-9A0A075B6K5 115 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 IGHV3OR16-10A0A075B7F0 116 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 TRAV3A0A0B4J244 114 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 HMGN4O00479 90 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 NDUFC1O43677 76 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 TRIAP1O43715 76 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 MIFP14174 115 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 RPL28P46779 137 aaKnown RBP5.19□□□□□ -1.58
NIPBL-208ENST00000514335 PLGLAQ15195 96 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 PHLDA3Q9Y5J5 127 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 IGSF10Q6WRI0 2623 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 LRCOL1A6NCL2 159 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 IGHV3-9P01782 118 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 IGHV4-31P0DP07 118 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 CCL4P13236 92 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 Q1RN00 199 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
NIPBL-208ENST00000514335 IGLV3-32A0A0A0MS00 114 aa5.18□□□□□ -1.58
NIPBL-208ENST00000514335 ADAMTSL4-AS1Q5T5F5 129 aa5.18□□□□□ -1.58
NIPBL-208ENST00000514335 ORMDL3Q8N138 153 aa5.18□□□□□ -1.58
NIPBL-208ENST00000514335 CEP295Q9C0D2 2601 aa5.18□□□□□ -1.58
NIPBL-208ENST00000514335 IGHV3OR16-9A0A0B4J2B5 98 aa5.18□□□□□ -1.58
NIPBL-208ENST00000514335 TMEM14DPA8MWL7 114 aa5.18□□□□□ -1.58
NIPBL-208ENST00000514335 BRWD1-AS2P59051 145 aa5.18□□□□□ -1.58
NIPBL-208ENST00000514335 CXCL6P80162 114 aa5.18□□□□□ -1.58
NIPBL-208ENST00000514335 Q8N6K4 173 aa5.18□□□□□ -1.58
NIPBL-208ENST00000514335 C6orf106Q9H6K1 298 aaPredicted RBP5.18□□□□□ -1.58
NIPBL-208ENST00000514335 HCG22E2RYF7 251 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 IGLV3-25P01717 112 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 CD28P10747 220 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 SPANXN5Q5MJ07 72 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 VMO1Q7Z5L0 202 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 SND1-IT1Q9HBX3 110 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 TRAV7A0A075B6U4 112 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 K7EQG2 157 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 NANOS2P60321 138 aaKnown RBP5.17□□□□□ -1.58
NIPBL-208ENST00000514335 TMEM263Q8WUH6 116 aaKnown RBP5.17□□□□□ -1.58
NIPBL-208ENST00000514335 TMEM141Q96I45 108 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 TEP1Q99973 2627 aaKnown RBP5.17□□□□□ -1.58
NIPBL-208ENST00000514335 TRBV30A0A0K0K1B3 111 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 IGHV3-30P01768 117 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 BGLAPP02818 100 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 IGHV3-30-5P0DP03 117 aa5.17□□□□□ -1.58
NIPBL-208ENST00000514335 ANKRD17O75179 2603 aaKnown RBP5.16□□□□□ -1.58
NIPBL-208ENST00000514335 SHANK1Q9Y566 2161 aa5.16□□□□□ -1.58
NIPBL-208ENST00000514335 SDHAF1A6NFY7 115 aa5.16□□□□□ -1.58
NIPBL-208ENST00000514335 ZNF815PA8K554 130 aa5.16□□□□□ -1.58
NIPBL-208ENST00000514335 LY6G5CQ5SRR4 150 aa5.16□□□□□ -1.58
NIPBL-208ENST00000514335 CCL26Q9Y258 94 aa5.16□□□□□ -1.58
NIPBL-208ENST00000514335 RPS27P42677 84 aaKnown RBP5.16□□□□□ -1.58
NIPBL-208ENST00000514335 MRPL51Q4U2R6 128 aaKnown RBP5.16□□□□□ -1.58
NIPBL-208ENST00000514335 VPS13AQ96RL7 3174 aa5.16□□□□□ -1.58
NIPBL-208ENST00000514335 PATE3B3GLJ2 98 aa5.15□□□□□ -1.58
NIPBL-208ENST00000514335 GNRH2O43555 120 aa5.15□□□□□ -1.58
NIPBL-208ENST00000514335 NDUFA3O95167 84 aa5.15□□□□□ -1.58
NIPBL-208ENST00000514335 LINC01590Q5TEZ4 76 aa5.15□□□□□ -1.58
NIPBL-208ENST00000514335 DMDP11532 3685 aa5.15□□□□□ -1.59
NIPBL-208ENST00000514335 TRBV5-4A0A0C4DH59 114 aa5.15□□□□□ -1.59
NIPBL-208ENST00000514335 FAM229AH3BQW9 127 aa5.15□□□□□ -1.59
NIPBL-208ENST00000514335 Q0VFX4 171 aa5.15□□□□□ -1.59
NIPBL-208ENST00000514335 Q6ZS46 218 aa5.15□□□□□ -1.59
NIPBL-208ENST00000514335 C1orf229Q6ZS94 237 aaPredicted RBP5.15□□□□□ -1.59
NIPBL-208ENST00000514335 Q8N7P7 452 aa5.15□□□□□ -1.59
NIPBL-208ENST00000514335 KLF14Q8TD94 323 aaPredicted RBP5.15□□□□□ -1.59
NIPBL-208ENST00000514335 SPTA1P02549 2419 aa5.15□□□□□ -1.59
NIPBL-208ENST00000514335 DOPEY1Q5JWR5 2465 aa5.14□□□□□ -1.59
NIPBL-208ENST00000514335 SPTY2D1-AS1A0A0U1RR47 76 aa5.14□□□□□ -1.59
NIPBL-208ENST00000514335 LEPROTO15243 131 aa5.14□□□□□ -1.59
NIPBL-208ENST00000514335 IGHV3-13P01766 116 aa5.14□□□□□ -1.59
NIPBL-208ENST00000514335 EDDM3BP56851 147 aa5.14□□□□□ -1.59
NIPBL-208ENST00000514335 REG3GQ6UW15 175 aa5.14□□□□□ -1.59
NIPBL-208ENST00000514335 FDCSPQ8NFU4 85 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms