RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 UBE2D3P61077 147 aa5.82□□□□□ -1.48
HERC4-214ENST00000513996 UBE2D2P62837 147 aa5.82□□□□□ -1.48
HERC4-214ENST00000513996 NEXN-AS1Q8NBZ9 246 aa5.82□□□□□ -1.48
HERC4-214ENST00000513996 DNAJC30Q96LL9 226 aa5.82□□□□□ -1.48
HERC4-214ENST00000513996 CDIP1Q9H305 208 aa5.82□□□□□ -1.48
HERC4-214ENST00000513996 Q9HAA7 133 aa5.82□□□□□ -1.48
HERC4-214ENST00000513996 TRBV10-1A0A0K0K1A3 114 aa5.81□□□□□ -1.48
HERC4-214ENST00000513996 PDE6DO43924 150 aa5.81□□□□□ -1.48
HERC4-214ENST00000513996 KRTAP10-1P60331 282 aa5.81□□□□□ -1.48
HERC4-214ENST00000513996 RAB4BP61018 213 aa5.81□□□□□ -1.48
HERC4-214ENST00000513996 WFDC2Q14508 124 aa5.81□□□□□ -1.48
HERC4-214ENST00000513996 TOR2AQ5JU69 321 aa5.81□□□□□ -1.48
HERC4-214ENST00000513996 SPANXN1Q5VSR9 72 aa5.81□□□□□ -1.48
HERC4-214ENST00000513996 MAPKAPK5-AS1Q8N8E1 139 aa5.81□□□□□ -1.48
HERC4-214ENST00000513996 OR2D3Q8NGH3 330 aa5.81□□□□□ -1.48
HERC4-214ENST00000513996 OR10G8Q8NGN5 311 aa5.81□□□□□ -1.48
HERC4-214ENST00000513996 VAX2Q9UIW0 290 aa5.81□□□□□ -1.48
HERC4-214ENST00000513996 TRBV7-3A0A075B6L6 115 aa5.8□□□□□ -1.48
HERC4-214ENST00000513996 A0A087WWC5 75 aa5.8□□□□□ -1.48
HERC4-214ENST00000513996 K7EN84 100 aa5.8□□□□□ -1.48
HERC4-214ENST00000513996 IFNA1P01562 189 aa5.8□□□□□ -1.48
HERC4-214ENST00000513996 GNG4P50150 75 aa5.8□□□□□ -1.48
HERC4-214ENST00000513996 XGP55808 180 aa5.8□□□□□ -1.48
HERC4-214ENST00000513996 RPL36AP83881 106 aaKnown RBP5.8□□□□□ -1.48
HERC4-214ENST00000513996 NIT1Q86X76 327 aa5.8□□□□□ -1.48
HERC4-214ENST00000513996 FER1L6-AS1Q8NA97 138 aa5.8□□□□□ -1.48
HERC4-214ENST00000513996 NUDT10Q8NFP7 164 aa5.8□□□□□ -1.48
HERC4-214ENST00000513996 OCC1Q8TAD7 63 aa5.8□□□□□ -1.48
HERC4-214ENST00000513996 RPL36ALQ969Q0 106 aaKnown RBP5.8□□□□□ -1.48
HERC4-214ENST00000513996 DAZAP1Q96EP5 407 aaKnown RBP5.8□□□□□ -1.48
HERC4-214ENST00000513996 NUDT11Q96G61 164 aa5.8□□□□□ -1.48
HERC4-214ENST00000513996 KRTAP9-6A0A140TA67 174 aa5.79□□□□□ -1.48
HERC4-214ENST00000513996 F5H697 171 aa5.79□□□□□ -1.48
HERC4-214ENST00000513996 RPS20P60866 119 aaKnown RBP5.79□□□□□ -1.48
HERC4-214ENST00000513996 ZNF56Q15929 161 aa5.79□□□□□ -1.48
HERC4-214ENST00000513996 LYZL1Q6UWQ5 148 aa5.79□□□□□ -1.48
HERC4-214ENST00000513996 NTM-AS1Q6ZSK4 140 aa5.79□□□□□ -1.48
HERC4-214ENST00000513996 SMIM12Q96EX1 92 aa5.79□□□□□ -1.48
HERC4-214ENST00000513996 M0QY20 66 aa5.78□□□□□ -1.48
HERC4-214ENST00000513996 PSCAO43653 123 aa5.78□□□□□ -1.48
HERC4-214ENST00000513996 NDUFS6O75380 124 aaKnown RBP5.78□□□□□ -1.48
HERC4-214ENST00000513996 P01737 135 aa5.78□□□□□ -1.48
HERC4-214ENST00000513996 TAGLN2P37802 199 aaKnown RBP5.78□□□□□ -1.48
HERC4-214ENST00000513996 LAGE3Q14657 143 aa5.78□□□□□ -1.48
HERC4-214ENST00000513996 Q8N1X5 172 aa5.78□□□□□ -1.48
HERC4-214ENST00000513996 KRTAP4-12Q9BQ66 201 aa5.78□□□□□ -1.48
HERC4-214ENST00000513996 TPPP3Q9BW30 176 aa5.78□□□□□ -1.48
HERC4-214ENST00000513996 SMDT1Q9H4I9 107 aa5.78□□□□□ -1.48
HERC4-214ENST00000513996 KLK12Q9UKR0 248 aa5.78□□□□□ -1.48
HERC4-214ENST00000513996 TRBV6-8A0A0A6YYG3 113 aa5.77□□□□□ -1.49
HERC4-214ENST00000513996 TRAV8-3A0A0A6YYJ7 113 aa5.77□□□□□ -1.49
HERC4-214ENST00000513996 NTF3P20783 257 aa5.77□□□□□ -1.49
HERC4-214ENST00000513996 GCSHP23434 173 aa5.77□□□□□ -1.49
HERC4-214ENST00000513996 CT83Q5H943 113 aa5.77□□□□□ -1.49
HERC4-214ENST00000513996 UQCC3Q6UW78 93 aa5.77□□□□□ -1.49
HERC4-214ENST00000513996 Q8N814 137 aa5.77□□□□□ -1.49
HERC4-214ENST00000513996 AP1S3Q96PC3 154 aa5.77□□□□□ -1.49
HERC4-214ENST00000513996 TM2D2Q9BX73 214 aa5.77□□□□□ -1.49
HERC4-214ENST00000513996 RNASE7Q9H1E1 156 aaKnown RBP5.77□□□□□ -1.49
HERC4-214ENST00000513996 FAT1Q14517 4588 aa5.77□□□□□ -1.49
HERC4-214ENST00000513996 TMEM262E9PQX1 116 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 F2Z2F3 143 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 TMEM250H0YL14 139 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 LECT2O14960 151 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 MGPP08493 103 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 SMIM17P0DL12 118 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 CACNG7P62955 275 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 SUMO4Q6EEV6 95 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 ENHOQ6UWT2 76 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 GTSF1Q8WW33 167 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 BAALCQ8WXS3 180 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 UBE2WQ96B02 151 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 BIN3Q9NQY0 253 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 FAM30AQ9NZY2 134 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 DNAH8Q96JB1 4490 aa5.76□□□□□ -1.49
HERC4-214ENST00000513996 A0A087WX48 190 aa5.75□□□□□ -1.49
HERC4-214ENST00000513996 IGLV5-52A0A0A0MRZ9 124 aa5.75□□□□□ -1.49
HERC4-214ENST00000513996 XKRY2A2RUG3 117 aa5.75□□□□□ -1.49
HERC4-214ENST00000513996 CTRLP40313 264 aa5.75□□□□□ -1.49
HERC4-214ENST00000513996 FOXA3P55318 350 aaPredicted RBP5.75□□□□□ -1.49
HERC4-214ENST00000513996 HAMPP81172 84 aa5.75□□□□□ -1.49
HERC4-214ENST00000513996 MPV17L2Q567V2 206 aa5.75□□□□□ -1.49
HERC4-214ENST00000513996 WDR73Q6P4I2 378 aa5.75□□□□□ -1.49
HERC4-214ENST00000513996 ATRAIDQ6UW56 229 aa5.75□□□□□ -1.49
HERC4-214ENST00000513996 DEFB104AQ8WTQ1 72 aa5.75□□□□□ -1.49
HERC4-214ENST00000513996 CHCHD7Q9BUK0 85 aa5.75□□□□□ -1.49
HERC4-214ENST00000513996 CNFNQ9BYD5 112 aa5.75□□□□□ -1.49
HERC4-214ENST00000513996 RPP21Q9H633 154 aaKnown RBP5.75□□□□□ -1.49
HERC4-214ENST00000513996 URGCP-MRPS24S4R325 110 aa5.75□□□□□ -1.49
HERC4-214ENST00000513996 IGKV2D-24A0A075B6R9 120 aa5.74□□□□□ -1.49
HERC4-214ENST00000513996 SRP19P09132 144 aaKnown RBP5.74□□□□□ -1.49
HERC4-214ENST00000513996 GAGE6Q13070 117 aa5.74□□□□□ -1.49
HERC4-214ENST00000513996 COMMD7Q86VX2 200 aa5.74□□□□□ -1.49
HERC4-214ENST00000513996 C15orf54Q8N8G6 183 aa5.74□□□□□ -1.49
HERC4-214ENST00000513996 Q8N976 141 aa5.74□□□□□ -1.49
HERC4-214ENST00000513996 NTN5Q8WTR8 489 aaPredicted RBP5.74□□□□□ -1.49
HERC4-214ENST00000513996 FAM210AQ96ND0 272 aa5.74□□□□□ -1.49
HERC4-214ENST00000513996 CHCHD5Q9BSY4 110 aa5.74□□□□□ -1.49
HERC4-214ENST00000513996 GATCO43716 136 aaKnown RBP5.73□□□□□ -1.49
HERC4-214ENST00000513996 TRGC1P0CF51 173 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 307.6 ms