RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 RPS25P62851 125 aaKnown RBP0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 RPL7L1Q6DKI1 246 aaKnown RBP0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 TCEAL4Q96EI5 215 aa0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 Q96NJ1 140 aa0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 PFDN5Q99471 154 aa0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 SCP2D1Q9UJQ7 156 aa0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 V9GYV3 84 aa0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 DAPK1P53355 1430 aa0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 LRP1Q07954 4544 aaKnown RBP0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 WNK2Q9Y3S1 2297 aa0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 CHD9Q3L8U1 2897 aa0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 LAMB1P07942 1786 aa0.1□□□□□ -2.39
TRAPPC11-210ENST00000513600 A6NIN4 97 aa0.1□□□□□ -2.39
TRAPPC11-210ENST00000513600 PIPP12273 146 aaPredicted RBP0.1□□□□□ -2.39
TRAPPC11-210ENST00000513600 COPZ1P61923 177 aa0.1□□□□□ -2.39
TRAPPC11-210ENST00000513600 UBE2G1P62253 170 aa0.1□□□□□ -2.39
TRAPPC11-210ENST00000513600 SDF2Q99470 211 aa0.1□□□□□ -2.39
TRAPPC11-210ENST00000513600 TMEM191AQ9H0A3 160 aa0.1□□□□□ -2.39
TRAPPC11-210ENST00000513600 ZNF292O60281 2723 aa0.1□□□□□ -2.39
TRAPPC11-210ENST00000513600 LAMC3Q9Y6N6 1575 aa0.1□□□□□ -2.39
TRAPPC11-210ENST00000513600 CELSR1Q9NYQ6 3014 aa0.1□□□□□ -2.39
TRAPPC11-210ENST00000513600 MYH9P35579 1960 aaKnown RBP0.1□□□□□ -2.39
TRAPPC11-210ENST00000513600 HRNRQ86YZ3 2850 aaPredicted RBP0.09□□□□□ -2.39
TRAPPC11-210ENST00000513600 IBTKQ9P2D0 1353 aaPredicted RBP0.09□□□□□ -2.39
TRAPPC11-210ENST00000513600 TMEM14DPA8MWL7 114 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 NDUFB6O95139 128 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 IL5P05113 134 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 NMBP08949 121 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 CBLN1P23435 193 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 UBE2D1P51668 147 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 EDDM3BP56851 147 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 COX6A2Q02221 97 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 ZNF818PQ6ZRF7 136 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 Q6ZRX8 168 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 KCNRGQ8N5I3 272 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 C10orf82Q8WW14 230 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 SPTSSAQ969W0 71 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 TPT1P8Q9HAU6 139 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 CCDC167Q9P0B6 97 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 SSC5DA1L4H1 1573 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 UNC13BO14795 1591 aa0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 TNS1Q9HBL0 1735 aaKnown RBP0.09□□□□□ -2.4
TRAPPC11-210ENST00000513600 GVINP1Q7Z2Y8 2422 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 PARP14Q460N5 1801 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 COL7A1Q02388 2944 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 NRXN2Q9P2S2 1712 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 NSD1Q96L73 2696 aaPredicted RBP0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 TRGV1A0A0A0MS02 117 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 CLPSL1A2RUU4 121 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 SNCGO76070 127 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 SPINK1P00995 79 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 ACYP2P14621 99 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 INSL4Q14641 139 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 Q5BKY6 102 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 Q5VV11 94 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 WFDC6Q9BQY6 131 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 MUC22E2RYF6 1773 aaPredicted RBP0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
TRAPPC11-210ENST00000513600 TRBV10-3A0A0K0K1G6 114 aa0.07□□□□□ -2.4
TRAPPC11-210ENST00000513600 FAM92AA1XBS5 289 aa0.07□□□□□ -2.4
TRAPPC11-210ENST00000513600 APOC4-APOC2K7ER74 178 aa0.07□□□□□ -2.4
TRAPPC11-210ENST00000513600 GCHFRP30047 84 aa0.07□□□□□ -2.4
TRAPPC11-210ENST00000513600 CCL8P80075 99 aa0.07□□□□□ -2.4
TRAPPC11-210ENST00000513600 S100A12P80511 92 aa0.07□□□□□ -2.4
TRAPPC11-210ENST00000513600 COPS9Q8WXC6 57 aa0.07□□□□□ -2.4
TRAPPC11-210ENST00000513600 DPH3Q96FX2 82 aa0.07□□□□□ -2.4
TRAPPC11-210ENST00000513600 ZNF518AQ6AHZ1 1483 aa0.07□□□□□ -2.4
TRAPPC11-210ENST00000513600 SPTA1P02549 2419 aa0.07□□□□□ -2.4
TRAPPC11-210ENST00000513600 GRIN2AQ12879 1464 aa0.06□□□□□ -2.4
TRAPPC11-210ENST00000513600 IFT140Q96RY7 1462 aa0.06□□□□□ -2.4
TRAPPC11-210ENST00000513600 PIN1P1O15428 100 aa0.06□□□□□ -2.4
TRAPPC11-210ENST00000513600 ARPC4P59998 168 aa0.06□□□□□ -2.4
TRAPPC11-210ENST00000513600 SELENOWP63302 87 aa0.06□□□□□ -2.4
TRAPPC11-210ENST00000513600 SPTSSBQ8NFR3 76 aa0.06□□□□□ -2.4
TRAPPC11-210ENST00000513600 FAM213BQ8TBF2 198 aa0.06□□□□□ -2.4
TRAPPC11-210ENST00000513600 LINC00312Q9Y6C7 94 aa0.06□□□□□ -2.4
TRAPPC11-210ENST00000513600 URB1O60287 2271 aaKnown RBP0.06□□□□□ -2.4
TRAPPC11-210ENST00000513600 ARFGEF1Q9Y6D6 1849 aa0.06□□□□□ -2.4
TRAPPC11-210ENST00000513600 MYOM3Q5VTT5 1437 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 MAP1BP46821 2468 aaKnown RBP0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 PIGBOS1A0A0B4J2F0 54 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 G3V318 75 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 NDUFA2O43678 99 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 SIX6O95475 246 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 SMIM6P0DI80 62 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 CCDC58Q4VC31 144 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 BAGE3Q86Y29 109 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 SNRNP25Q9BV90 132 aaKnown RBP0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 SEC11CQ9BY50 192 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 AGPAT4-IT1Q9H0P7 198 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 APC2O95996 2303 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 LRRC37A3O60309 1634 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 CHD6Q8TD26 2715 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 USF3Q68DE3 2245 aa0.05□□□□□ -2.4
TRAPPC11-210ENST00000513600 GOLGA3Q08378 1498 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 PXDNQ92626 1479 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 MYO7BQ6PIF6 2116 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 ZMYM4Q5VZL5 1548 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 TRAV1-2A0A0B4J238 106 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 SPAARA0A1B0GVQ0 90 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms