RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 GNGT2O14610 69 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 DNAL4O96015 105 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 IGHV3-30P01768 117 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 IGHV3-30-5P0DP03 117 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 PDE6GP18545 87 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 UBE2D1P51668 147 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 UBE2L3P68036 154 aaKnown RBP0.7□□□□□ -2.3
RNF4-219ENST00000513450 Q0VG73 95 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 FAM74A1Q5RGS3 127 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 C12orf73Q69YU5 71 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 COMMD6Q7Z4G1 85 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 ATG5Q9H1Y0 275 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 KLK9Q9UKQ9 250 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 PSME4Q14997 1843 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 PARP14Q460N5 1801 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 SCAPERQ9BY12 1400 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 RB1CC1Q8TDY2 1594 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 PLXNA1Q9UIW2 1896 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 MED13LQ71F56 2210 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 KDM5AP29375 1690 aaKnown RBP0.69□□□□□ -2.3
RNF4-219ENST00000513450 GOLGA3Q08378 1498 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 TRAV23DV6A0A075B6W5 121 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 LOC110117498A0A087WWA1 95 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 TRAV13-2A0A0B4J235 113 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 IGKV3D-7A0A0C4DH55 119 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 IGKV3OR2-268A0A0C4DH90 116 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 TRBV10-3A0A0K0K1G6 114 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 JMJD7-PLA2G4BH0Y9G9 81 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 INE1O15225 51 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 HCRTO43612 131 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 MRPS14O60783 128 aaKnown RBP0.69□□□□□ -2.3
RNF4-219ENST00000513450 FXYD4P59646 89 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 CCL8P80075 99 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 DCDP81605 110 aaKnown RBP0.69□□□□□ -2.3
RNF4-219ENST00000513450 MPV17LQ2QL34 196 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 TDRG1Q3Y452 100 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 UNQ6190/PRO20217Q6UXQ8 127 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 C4orf3Q8WVX3 66 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 DMAC1Q96GE9 116 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 AMELYQ99218 206 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 VAMP8Q9BV40 100 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 BPESC1Q9GZL8 116 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 SCP2D1Q9UJQ7 156 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 DLEC1Q9Y238 1755 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 TROQ12816 1431 aaPredicted RBP0.69□□□□□ -2.3
RNF4-219ENST00000513450 DLG5Q8TDM6 1919 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 ADGRB2O60241 1585 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 SPAG17Q6Q759 2223 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 ANKRD36BQ8N2N9 1353 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 OTOGLQ3ZCN5 2332 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 TET3O43151 1660 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 COL4A6Q14031 1691 aa0.69□□□□□ -2.3
RNF4-219ENST00000513450 CDK12Q9NYV4 1490 aaPredicted RBP0.68□□□□□ -2.3
RNF4-219ENST00000513450 A0A087WTM6 91 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 A6NIN4 97 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 H3BQ15 152 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 M0R2N4 97 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 CHD1O14646 1710 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 SSSCA1O60232 199 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 SIX6O95475 246 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 NMBP08949 121 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 LYNX1P0DP58 116 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 DAPK1P53355 1430 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 RPL37AP61513 92 aaKnown RBP0.68□□□□□ -2.3
RNF4-219ENST00000513450 GNG11P61952 73 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 FXYD3Q14802 87 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 Q5VV11 94 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 RPL7L1Q6DKI1 246 aaKnown RBP0.68□□□□□ -2.3
RNF4-219ENST00000513450 LINC00299Q6ZSB3 139 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 DEFB132Q7Z7B7 95 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 C20orf197Q8N268 126 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 LINC00208Q96KT6 92 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 OBSCN-AS1Q96MR7 158 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 C20orf78Q9BR46 151 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 TANC1Q9C0D5 1861 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 Q9H521 79 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 TNS1Q9HBL0 1735 aaKnown RBP0.68□□□□□ -2.3
RNF4-219ENST00000513450 NRXN2Q9P2S2 1712 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 V9GYS6 101 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 SBF2Q86WG5 1849 aa0.68□□□□□ -2.3
RNF4-219ENST00000513450 ZNF142P52746 1687 aaPredicted RBP0.68□□□□□ -2.3
RNF4-219ENST00000513450 PLEKHH2Q8IVE3 1493 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 SHANK2Q9UPX8 1470 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 ABCA1O95477 2261 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 AFDNP55196 1824 aaKnown RBP0.67□□□□□ -2.3
RNF4-219ENST00000513450 DOCK2Q92608 1830 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 IGKV2-40A0A087WW87 121 aaPredicted RBP0.67□□□□□ -2.3
RNF4-219ENST00000513450 TRAV22A0A0B4J277 110 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 IGKV2D-40P01614 121 aaPredicted RBP0.67□□□□□ -2.3
RNF4-219ENST00000513450 CCL3L1P16619 93 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 LINC00322Q6ZN03 302 aaPredicted RBP0.67□□□□□ -2.3
RNF4-219ENST00000513450 NDUFA11Q86Y39 141 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 C5orf56Q8N8D9 126 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 PMCHL2Q9BQD1 86 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 MED9Q9NWA0 146 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 TOPAZ1Q8N9V7 1692 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 RREB1Q92766 1687 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 PI4KAP42356 2102 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 ARHGAP35Q9NRY4 1499 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 MON2Q7Z3U7 1717 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms