RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 LELP1Q5T871 98 aa4.41□□□□□ -1.7
KDM3B-208ENST00000512928 SPANXN1Q5VSR9 72 aa4.41□□□□□ -1.7
KDM3B-208ENST00000512928 UFSP1Q6NVU6 142 aa4.41□□□□□ -1.7
KDM3B-208ENST00000512928 Q6ZRN7 208 aaPredicted RBP4.41□□□□□ -1.7
KDM3B-208ENST00000512928 OR10AG1Q8NH19 301 aa4.41□□□□□ -1.7
KDM3B-208ENST00000512928 OCC1Q8TAD7 63 aa4.41□□□□□ -1.7
KDM3B-208ENST00000512928 DAZAP1Q96EP5 407 aaKnown RBP4.41□□□□□ -1.7
KDM3B-208ENST00000512928 SFRP2Q96HF1 295 aa4.41□□□□□ -1.7
KDM3B-208ENST00000512928 CNFNQ9BYD5 112 aa4.41□□□□□ -1.7
KDM3B-208ENST00000512928 F5H697 171 aa4.4□□□□□ -1.71
KDM3B-208ENST00000512928 K7EP13 123 aa4.4□□□□□ -1.71
KDM3B-208ENST00000512928 SMIM17P0DL12 118 aa4.4□□□□□ -1.71
KDM3B-208ENST00000512928 CTRLP40313 264 aa4.4□□□□□ -1.71
KDM3B-208ENST00000512928 FOXA3P55318 350 aaPredicted RBP4.4□□□□□ -1.71
KDM3B-208ENST00000512928 TIRAPP58753 221 aa4.4□□□□□ -1.71
KDM3B-208ENST00000512928 KRTAP10-2P60368 255 aa4.4□□□□□ -1.71
KDM3B-208ENST00000512928 LINC01556Q5JQF7 62 aa4.4□□□□□ -1.71
KDM3B-208ENST00000512928 SMIM7Q9BQ49 75 aa4.4□□□□□ -1.71
KDM3B-208ENST00000512928 EIF5A2Q9GZV4 153 aaKnown RBP4.4□□□□□ -1.71
KDM3B-208ENST00000512928 BIN3Q9NQY0 253 aa4.4□□□□□ -1.71
KDM3B-208ENST00000512928 Q9UF83 564 aa4.4□□□□□ -1.71
KDM3B-208ENST00000512928 URGCP-MRPS24S4R325 110 aa4.4□□□□□ -1.71
KDM3B-208ENST00000512928 A0A087WTM6 91 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 A0A087WWC5 75 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 FAM231BA6NCW3 169 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 P01737 135 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 MGPP08493 103 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 GZMBP10144 247 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 CEBPGP53567 150 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 RPL23P62829 140 aaKnown RBP4.39□□□□□ -1.71
KDM3B-208ENST00000512928 RPL36AP83881 106 aaKnown RBP4.39□□□□□ -1.71
KDM3B-208ENST00000512928 WDR73Q6P4I2 378 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 KCNIP4Q6PIL6 250 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 Q8N3U1 123 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 MAPKAPK5-AS1Q8N8E1 139 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.39□□□□□ -1.71
KDM3B-208ENST00000512928 OR2D3Q8NGH3 330 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 RPL36ALQ969Q0 106 aaKnown RBP4.39□□□□□ -1.71
KDM3B-208ENST00000512928 ISOC2Q96AB3 205 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 OSTCQ9NRP0 149 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 LRP1BQ9NZR2 4599 aa4.39□□□□□ -1.71
KDM3B-208ENST00000512928 A0A087WX48 190 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 TMEM218A2RU14 115 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 XKRY2A2RUG3 117 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 ZNF727A8MUV8 499 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 IBA57-AS1B1ANH7 110 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 HSBP1L1C9JCN9 74 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 LINC00694P0DN24 101 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 RPS20P60866 119 aaKnown RBP4.38□□□□□ -1.71
KDM3B-208ENST00000512928 RAB4BP61018 213 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 C21orf62-AS1Q17RA5 79 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 FER1L6-AS1Q8NA97 138 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 NUDT10Q8NFP7 164 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 GTSF1Q8WW33 167 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 NUDT11Q96G61 164 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 AP1S3Q96PC3 154 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 RPP21Q9H633 154 aaKnown RBP4.38□□□□□ -1.71
KDM3B-208ENST00000512928 NAT8Q9UHE5 227 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 CARHSP1Q9Y2V2 147 aaKnown RBP4.38□□□□□ -1.71
KDM3B-208ENST00000512928 V9GYV3 84 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 DNAH5Q8TE73 4624 aa4.38□□□□□ -1.71
KDM3B-208ENST00000512928 TRBV7-3A0A075B6L6 115 aa4.37□□□□□ -1.71
KDM3B-208ENST00000512928 IGLV5-52A0A0A0MRZ9 124 aa4.37□□□□□ -1.71
KDM3B-208ENST00000512928 TRBV10-1A0A0K0K1A3 114 aa4.37□□□□□ -1.71
KDM3B-208ENST00000512928 TMEM262E9PQX1 116 aa4.37□□□□□ -1.71
KDM3B-208ENST00000512928 CDK2AP2O75956 126 aa4.37□□□□□ -1.71
KDM3B-208ENST00000512928 PNRC1Q12796 327 aaPredicted RBP4.37□□□□□ -1.71
KDM3B-208ENST00000512928 TMEM241Q24JQ0 296 aa4.37□□□□□ -1.71
KDM3B-208ENST00000512928 DAZ4Q86SG3 579 aaKnown RBP4.37□□□□□ -1.71
KDM3B-208ENST00000512928 COMMD7Q86VX2 200 aa4.37□□□□□ -1.71
KDM3B-208ENST00000512928 SEC11CQ9BY50 192 aa4.37□□□□□ -1.71
KDM3B-208ENST00000512928 GFRA4Q9GZZ7 299 aa4.37□□□□□ -1.71
KDM3B-208ENST00000512928 RNASE7Q9H1E1 156 aaKnown RBP4.37□□□□□ -1.71
KDM3B-208ENST00000512928 DAZ3Q9NR90 486 aaKnown RBP4.37□□□□□ -1.71
KDM3B-208ENST00000512928 KIF25-AS1Q9Y6Z4 181 aa4.37□□□□□ -1.71
KDM3B-208ENST00000512928 HSPG2P98160 4391 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
KDM3B-208ENST00000512928 TRAV8-3A0A0A6YYJ7 113 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 LOC105371267A0A1B0GV96 52 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 LECT2O14960 151 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 UBE2D3P61077 147 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 UBE2D2P62837 147 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 LAGE3Q14657 143 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 CDPF1Q6NVV7 123 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 NEXN-AS1Q8NBZ9 246 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 TSKUQ8WUA8 353 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 UBE2WQ96B02 151 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 CHCHD5Q9BSY4 110 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 TM2D2Q9BX73 214 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 KLK12Q9UKR0 248 aa4.36□□□□□ -1.71
KDM3B-208ENST00000512928 IGKV2D-24A0A075B6R9 120 aa4.35□□□□□ -1.71
KDM3B-208ENST00000512928 TRBV6-8A0A0A6YYG3 113 aa4.35□□□□□ -1.71
KDM3B-208ENST00000512928 SMIM27A0A1W2PRY6 76 aa4.35□□□□□ -1.71
KDM3B-208ENST00000512928 A8MWL6 223 aa4.35□□□□□ -1.71
KDM3B-208ENST00000512928 F2Z2F3 143 aa4.35□□□□□ -1.71
KDM3B-208ENST00000512928 H7C1H1 209 aa4.35□□□□□ -1.71
KDM3B-208ENST00000512928 CRPP02741 224 aa4.35□□□□□ -1.71
KDM3B-208ENST00000512928 GCSHP23434 173 aa4.35□□□□□ -1.71
KDM3B-208ENST00000512928 CACNG7P62955 275 aa4.35□□□□□ -1.71
KDM3B-208ENST00000512928 TWIST1Q15672 202 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms