RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 FER1L6-AS1Q8NA97 138 aa11.01□□□□□ -0.65
SIM1-204ENST00000511871 RNASE7Q9H1E1 156 aaKnown RBP11.01□□□□□ -0.65
SIM1-204ENST00000511871 DNAH17Q9UFH2 4485 aa11.01□□□□□ -0.65
SIM1-204ENST00000511871 XKRY2A2RUG3 117 aa11□□□□□ -0.65
SIM1-204ENST00000511871 SIVA1O15304 175 aa11□□□□□ -0.65
SIM1-204ENST00000511871 TIRAPP58753 221 aa11□□□□□ -0.65
SIM1-204ENST00000511871 KRTAP1-5Q9BYS1 174 aa11□□□□□ -0.65
SIM1-204ENST00000511871 LY96Q9Y6Y9 160 aa11□□□□□ -0.65
SIM1-204ENST00000511871 LINC00694P0DN24 101 aa10.99□□□□□ -0.65
SIM1-204ENST00000511871 COA6Q5JTJ3 125 aaKnown RBP10.99□□□□□ -0.65
SIM1-204ENST00000511871 C1orf134Q5TEV5 83 aa10.99□□□□□ -0.65
SIM1-204ENST00000511871 LINC00336Q6ZUF6 198 aa10.99□□□□□ -0.65
SIM1-204ENST00000511871 RPP21Q9H633 154 aaKnown RBP10.99□□□□□ -0.65
SIM1-204ENST00000511871 Q9UF83 564 aa10.99□□□□□ -0.65
SIM1-204ENST00000511871 EPPK1P58107 5090 aaKnown RBP10.99□□□□□ -0.65
SIM1-204ENST00000511871 DNAH2Q9P225 4427 aa10.99□□□□□ -0.65
SIM1-204ENST00000511871 SSTP61278 116 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 TTC32Q5I0X7 151 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 KCNIP4Q6PIL6 250 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 LINC01551Q86U37 167 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 A0A1W2PPQ1 181 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 GAGE12JA6NER3 117 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 GAGE1Q13065 139 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 GAGE4Q13068 117 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 GAGE5Q13069 117 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 GAGE13Q4V321 117 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 FAM231DQ6ZW35 169 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 ATP6V0E2Q8NHE4 81 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 TPPP3Q9BW30 176 aa10.98□□□□□ -0.65
SIM1-204ENST00000511871 F2Z2F3 143 aa10.97□□□□□ -0.65
SIM1-204ENST00000511871 CACNG7P62955 275 aa10.97□□□□□ -0.65
SIM1-204ENST00000511871 LYZL1Q6UWQ5 148 aa10.97□□□□□ -0.65
SIM1-204ENST00000511871 WFDC10BQ8IUB3 73 aa10.97□□□□□ -0.65
SIM1-204ENST00000511871 C6orf223Q8N319 242 aa10.97□□□□□ -0.65
SIM1-204ENST00000511871 KIF25-AS1Q9Y6Z4 181 aa10.97□□□□□ -0.65
SIM1-204ENST00000511871 RAB4BP61018 213 aa10.96□□□□□ -0.65
SIM1-204ENST00000511871 PYY3Q5JQD4 70 aa10.96□□□□□ -0.65
SIM1-204ENST00000511871 GTSF1LQ9H1H1 148 aa10.96□□□□□ -0.65
SIM1-204ENST00000511871 MSRB1Q9NZV6 116 aa10.96□□□□□ -0.65
SIM1-204ENST00000511871 TRAV9-1A0A075B6T8 112 aa10.95□□□□□ -0.66
SIM1-204ENST00000511871 GATCO43716 136 aaKnown RBP10.95□□□□□ -0.66
SIM1-204ENST00000511871 CTRLP40313 264 aa10.95□□□□□ -0.66
SIM1-204ENST00000511871 AP1S3Q96PC3 154 aa10.95□□□□□ -0.66
SIM1-204ENST00000511871 TRBV10-1A0A0K0K1A3 114 aa10.95□□□□□ -0.66
SIM1-204ENST00000511871 PRSS29PA6NIE9 313 aa10.95□□□□□ -0.66
SIM1-204ENST00000511871 LINC00587B1AMM8 73 aa10.95□□□□□ -0.66
SIM1-204ENST00000511871 LINC00315P59091 139 aa10.95□□□□□ -0.66
SIM1-204ENST00000511871 ZNF56Q15929 161 aa10.95□□□□□ -0.66
SIM1-204ENST00000511871 WDR73Q6P4I2 378 aa10.95□□□□□ -0.66
SIM1-204ENST00000511871 OR10D4PQ8NGN7 298 aa10.95□□□□□ -0.66
SIM1-204ENST00000511871 DNAH10OSP0CZ25 163 aa10.94□□□□□ -0.66
SIM1-204ENST00000511871 ERVFC1-1P60608 527 aa10.94□□□□□ -0.66
SIM1-204ENST00000511871 LELP1Q5T871 98 aa10.94□□□□□ -0.66
SIM1-204ENST00000511871 GTSF1Q8WW33 167 aa10.94□□□□□ -0.66
SIM1-204ENST00000511871 CNFNQ9BYD5 112 aa10.94□□□□□ -0.66
SIM1-204ENST00000511871 SMIM17P0DL12 118 aa10.93□□□□□ -0.66
SIM1-204ENST00000511871 NTF3P20783 257 aa10.93□□□□□ -0.66
SIM1-204ENST00000511871 HIST1H2BLQ99880 126 aa10.93□□□□□ -0.66
SIM1-204ENST00000511871 FAT2Q9NYQ8 4349 aa10.92□□□□□ -0.66
SIM1-204ENST00000511871 A8MWL6 223 aa10.92□□□□□ -0.66
SIM1-204ENST00000511871 BTF3P20290 206 aaKnown RBP10.92□□□□□ -0.66
SIM1-204ENST00000511871 CT83Q5H943 113 aa10.92□□□□□ -0.66
SIM1-204ENST00000511871 OR10G8Q8NGN5 311 aa10.92□□□□□ -0.66
SIM1-204ENST00000511871 OSTCQ9NRP0 149 aa10.92□□□□□ -0.66
SIM1-204ENST00000511871 TRAV8-6A0A0B4J262 113 aa10.91□□□□□ -0.66
SIM1-204ENST00000511871 A0A1B0GVY2 172 aa10.91□□□□□ -0.66
SIM1-204ENST00000511871 F5H697 171 aa10.91□□□□□ -0.66
SIM1-204ENST00000511871 RPL36AP83881 106 aaKnown RBP10.91□□□□□ -0.66
SIM1-204ENST00000511871 OR10J3Q5JRS4 329 aa10.91□□□□□ -0.66
SIM1-204ENST00000511871 NEXN-AS1Q8NBZ9 246 aa10.91□□□□□ -0.66
SIM1-204ENST00000511871 RPL36ALQ969Q0 106 aaKnown RBP10.91□□□□□ -0.66
SIM1-204ENST00000511871 PACRGQ96M98 296 aaPredicted RBP10.91□□□□□ -0.66
SIM1-204ENST00000511871 HECTD4Q9Y4D8 3996 aa10.91□□□□□ -0.66
SIM1-204ENST00000511871 TRBV7-3A0A075B6L6 115 aa10.91□□□□□ -0.66
SIM1-204ENST00000511871 FABP4P15090 132 aa10.91□□□□□ -0.66
SIM1-204ENST00000511871 EVI2AP22794 236 aa10.91□□□□□ -0.66
SIM1-204ENST00000511871 UBE2D3P61077 147 aa10.91□□□□□ -0.66
SIM1-204ENST00000511871 UBE2D2P62837 147 aa10.91□□□□□ -0.66
SIM1-204ENST00000511871 TRAV9-2A0A087WT02 112 aa10.9□□□□□ -0.66
SIM1-204ENST00000511871 IGHV3-38A0A0C4DH36 116 aa10.9□□□□□ -0.66
SIM1-204ENST00000511871 K7EP13 123 aa10.9□□□□□ -0.66
SIM1-204ENST00000511871 MGPP08493 103 aa10.9□□□□□ -0.66
SIM1-204ENST00000511871 FOXA3P55318 350 aaPredicted RBP10.89□□□□□ -0.67
SIM1-204ENST00000511871 TWIST1Q15672 202 aa10.89□□□□□ -0.67
SIM1-204ENST00000511871 LINC01556Q5JQF7 62 aa10.89□□□□□ -0.67
SIM1-204ENST00000511871 DPH3P1Q9H4G8 78 aa10.89□□□□□ -0.67
SIM1-204ENST00000511871 BIRC6Q9NR09 4857 aa10.89□□□□□ -0.67
SIM1-204ENST00000511871 TNP2Q05952 138 aa10.88□□□□□ -0.67
SIM1-204ENST00000511871 JOSD1Q15040 202 aaPredicted RBP10.88□□□□□ -0.67
SIM1-204ENST00000511871 PGLYRP4Q96LB8 373 aa10.88□□□□□ -0.67
SIM1-204ENST00000511871 V9GYV3 84 aa10.88□□□□□ -0.67
SIM1-204ENST00000511871 M0QY20 66 aa10.87□□□□□ -0.67
SIM1-204ENST00000511871 PDZD11Q5EBL8 140 aa10.87□□□□□ -0.67
SIM1-204ENST00000511871 SUMO4Q6EEV6 95 aa10.87□□□□□ -0.67
SIM1-204ENST00000511871 TSKUQ8WUA8 353 aa10.87□□□□□ -0.67
SIM1-204ENST00000511871 GFRA4Q9GZZ7 299 aa10.87□□□□□ -0.67
SIM1-204ENST00000511871 FAM231BA6NCW3 169 aa10.87□□□□□ -0.67
SIM1-204ENST00000511871 Q6ZRN7 208 aaPredicted RBP10.87□□□□□ -0.67
SIM1-204ENST00000511871 TRAPPC1Q9Y5R8 145 aa10.87□□□□□ -0.67
SIM1-204ENST00000511871 TNFRSF18Q9Y5U5 241 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms