RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 NDUFA2O43678 99 aa0.31□□□□□ -2.36
CHD1-207ENST00000511628 EDDM3BP56851 147 aa0.31□□□□□ -2.36
CHD1-207ENST00000511628 BTG2P78543 158 aa0.31□□□□□ -2.36
CHD1-207ENST00000511628 PDCD10Q9BUL8 212 aa0.31□□□□□ -2.36
CHD1-207ENST00000511628 SPANXDQ9BXN6 97 aa0.31□□□□□ -2.36
CHD1-207ENST00000511628 PROK2Q9HC23 129 aa0.31□□□□□ -2.36
CHD1-207ENST00000511628 SYNE2Q8WXH0 6885 aaKnown RBP0.31□□□□□ -2.36
CHD1-207ENST00000511628 MAP2P11137 1827 aaKnown RBP0.31□□□□□ -2.36
CHD1-207ENST00000511628 AKAP11Q9UKA4 1901 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 GRIN2AQ12879 1464 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 ZNF518AQ6AHZ1 1483 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 GVQW2A0A096LPI5 108 aaPredicted RBP0.3□□□□□ -2.36
CHD1-207ENST00000511628 TMEM14DPA8MWL7 114 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 PIN1P1O15428 100 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 SIX6O95475 246 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 ACYP2P14621 99 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 FGF7P21781 194 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 UBE2D1P51668 147 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 COX6A2Q02221 97 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 INSL4Q14641 139 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 Q5VV11 94 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 SPTSSBQ8NFR3 76 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 AQP10Q96PS8 301 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 WFDC6Q9BQY6 131 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 SEC11CQ9BY50 192 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 AGPAT4-IT1Q9H0P7 198 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 CACNA1HO95180 2353 aa0.3□□□□□ -2.36
CHD1-207ENST00000511628 IFT140Q96RY7 1462 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 JMJD1CQ15652 2540 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 PLXNA1Q9UIW2 1896 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 PTPRZ1P23471 2315 aaPredicted RBP0.29□□□□□ -2.36
CHD1-207ENST00000511628 A0A087WTM6 91 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 HIST1H1DP16402 221 aaKnown RBP0.29□□□□□ -2.36
CHD1-207ENST00000511628 GCHFRP30047 84 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 Q56UQ5 140 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 MEIG1Q5JSS6 88 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 Q6ZRX8 168 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 BAGE3Q86Y29 109 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 C10orf82Q8WW14 230 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 PPP3R2Q96LZ3 170 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 Q96NJ1 140 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 FAM107BQ9H098 131 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 SERP1Q9Y6X1 66 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 R4GMQ9 66 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 PI4KAP42356 2102 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 IBTKQ9P2D0 1353 aaPredicted RBP0.29□□□□□ -2.36
CHD1-207ENST00000511628 PARP14Q460N5 1801 aa0.29□□□□□ -2.36
CHD1-207ENST00000511628 TPRP12270 2363 aaKnown RBP0.28□□□□□ -2.36
CHD1-207ENST00000511628 LAMB1P07942 1786 aa0.28□□□□□ -2.36
CHD1-207ENST00000511628 TRGV1A0A0A0MS02 117 aa0.28□□□□□ -2.36
CHD1-207ENST00000511628 TRAV13-2A0A0B4J235 113 aa0.28□□□□□ -2.36
CHD1-207ENST00000511628 GNG7O60262 68 aa0.28□□□□□ -2.36
CHD1-207ENST00000511628 IFNGP01579 166 aa0.28□□□□□ -2.36
CHD1-207ENST00000511628 APOC2P02655 101 aa0.28□□□□□ -2.36
CHD1-207ENST00000511628 S100A7L2Q5SY68 101 aa0.28□□□□□ -2.36
CHD1-207ENST00000511628 Q6AWC8 147 aa0.28□□□□□ -2.36
CHD1-207ENST00000511628 RPL13AP3Q6NVV1 102 aa0.28□□□□□ -2.36
CHD1-207ENST00000511628 C8orf59Q8N0T1 100 aaPredicted RBP0.28□□□□□ -2.36
CHD1-207ENST00000511628 LINC00312Q9Y6C7 94 aa0.28□□□□□ -2.36
CHD1-207ENST00000511628 CFTRP13569 1480 aa0.28□□□□□ -2.37
CHD1-207ENST00000511628 LAMC3Q9Y6N6 1575 aa0.28□□□□□ -2.37
CHD1-207ENST00000511628 NRXN2Q9P2S2 1712 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 PHIPQ8WWQ0 1821 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 A0A0D9SFI3 127 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 SPAARA0A1B0GVQ0 90 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 HCG22E2RYF7 251 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 NMBP08949 121 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 S100A3P33764 101 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 UBE2DNLQ8IWF7 75 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.27□□□□□ -2.37
CHD1-207ENST00000511628 SMIM4Q8WVI0 70 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 CYP4F30PQ9H0H9 118 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 AHCTF1Q8WYP5 2266 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 F8P00451 2351 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 MYOM3Q5VTT5 1437 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 BDP1A6H8Y1 2624 aa0.27□□□□□ -2.37
CHD1-207ENST00000511628 MUC22E2RYF6 1773 aaPredicted RBP0.27□□□□□ -2.37
CHD1-207ENST00000511628 TRAV1-2A0A0B4J238 106 aa0.26□□□□□ -2.37
CHD1-207ENST00000511628 CLPSL1A2RUU4 121 aa0.26□□□□□ -2.37
CHD1-207ENST00000511628 SSSCA1O60232 199 aa0.26□□□□□ -2.37
CHD1-207ENST00000511628 SPINK8P0C7L1 97 aa0.26□□□□□ -2.37
CHD1-207ENST00000511628 AKAIN1P0CW23 69 aa0.26□□□□□ -2.37
CHD1-207ENST00000511628 C10orf128Q5T292 105 aa0.26□□□□□ -2.37
CHD1-207ENST00000511628 FAM213BQ8TBF2 198 aa0.26□□□□□ -2.37
CHD1-207ENST00000511628 LENEPQ9Y5L5 61 aa0.26□□□□□ -2.37
CHD1-207ENST00000511628 PXDNQ92626 1479 aa0.26□□□□□ -2.37
CHD1-207ENST00000511628 LRRC37A3O60309 1634 aa0.26□□□□□ -2.37
CHD1-207ENST00000511628 ABCA12Q86UK0 2595 aa0.26□□□□□ -2.37
CHD1-207ENST00000511628 ASXL3Q9C0F0 2248 aa0.25□□□□□ -2.37
CHD1-207ENST00000511628 FSIP2Q5CZC0 6907 aa0.25□□□□□ -2.37
CHD1-207ENST00000511628 PPP1R17O96001 155 aa0.25□□□□□ -2.37
CHD1-207ENST00000511628 SPINK1P00995 79 aa0.25□□□□□ -2.37
CHD1-207ENST00000511628 TNFP01375 233 aa0.25□□□□□ -2.37
CHD1-207ENST00000511628 Q5BKY6 102 aa0.25□□□□□ -2.37
CHD1-207ENST00000511628 TTC9CQ8N5M4 171 aa0.25□□□□□ -2.37
CHD1-207ENST00000511628 PP6455Q8WZ26 134 aa0.25□□□□□ -2.37
CHD1-207ENST00000511628 TTC28Q96AY4 2481 aa0.25□□□□□ -2.37
CHD1-207ENST00000511628 CACNA1CQ13936 2221 aa0.25□□□□□ -2.37
CHD1-207ENST00000511628 MYH7P12883 1935 aa0.25□□□□□ -2.37
CHD1-207ENST00000511628 TNS1Q9HBL0 1735 aaKnown RBP0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms