RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 HECTD4Q9Y4D8 3996 aa11.33□□□□□ -0.6
SKP2-205ENST00000509692 GAGE12JA6NER3 117 aa11.33□□□□□ -0.6
SKP2-205ENST00000509692 S100PP25815 95 aa11.33□□□□□ -0.6
SKP2-205ENST00000509692 GAGE1Q13065 139 aa11.33□□□□□ -0.6
SKP2-205ENST00000509692 GAGE4Q13068 117 aa11.33□□□□□ -0.6
SKP2-205ENST00000509692 GAGE5Q13069 117 aa11.33□□□□□ -0.6
SKP2-205ENST00000509692 GAGE13Q4V321 117 aa11.33□□□□□ -0.6
SKP2-205ENST00000509692 NEGR1Q7Z3B1 354 aa11.33□□□□□ -0.6
SKP2-205ENST00000509692 H7C1H1 209 aa11.32□□□□□ -0.6
SKP2-205ENST00000509692 M0QY20 66 aa11.32□□□□□ -0.6
SKP2-205ENST00000509692 UBE2DNLQ8IWF7 75 aa11.32□□□□□ -0.6
SKP2-205ENST00000509692 URGCP-MRPS24S4R325 110 aa11.32□□□□□ -0.6
SKP2-205ENST00000509692 TRAV9-1A0A075B6T8 112 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 RPL36AP83881 106 aaKnown RBP11.31□□□□□ -0.6
SKP2-205ENST00000509692 SH2D6Q7Z4S9 175 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 AMN1Q8IY45 258 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 NEXN-AS1Q8NBZ9 246 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 ZNRF2Q8NHG8 242 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 RPL36ALQ969Q0 106 aaKnown RBP11.31□□□□□ -0.6
SKP2-205ENST00000509692 RNF185Q96GF1 192 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 TRAV26-2A0A0B4J265 109 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 LINC00694P0DN24 101 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 RAB4AP20338 218 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 CCL18P55774 89 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 ESRGQ1W209 222 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 RASL11AQ6T310 242 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 ATRAIDQ6UW56 229 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 GATD1Q8NB37 220 aa11.31□□□□□ -0.6
SKP2-205ENST00000509692 TRBV7-3A0A075B6L6 115 aa11.3□□□□□ -0.6
SKP2-205ENST00000509692 FAM104BQ5XKR9 115 aa11.3□□□□□ -0.6
SKP2-205ENST00000509692 LYPD5Q6UWN5 251 aa11.29□□□□□ -0.6
SKP2-205ENST00000509692 ATP6V0E2Q8NHE4 81 aa11.29□□□□□ -0.6
SKP2-205ENST00000509692 FRZBQ92765 325 aa11.29□□□□□ -0.6
SKP2-205ENST00000509692 IGLV2-18A0A075B6J9 118 aa11.28□□□□□ -0.6
SKP2-205ENST00000509692 M0R2N4 97 aa11.28□□□□□ -0.6
SKP2-205ENST00000509692 DNAJC30Q96LL9 226 aa11.28□□□□□ -0.6
SKP2-205ENST00000509692 NIT2Q9NQR4 276 aa11.28□□□□□ -0.6
SKP2-205ENST00000509692 LINC00588Q9Y4M8 146 aa11.28□□□□□ -0.6
SKP2-205ENST00000509692 TNFRSF18Q9Y5U5 241 aa11.28□□□□□ -0.6
SKP2-205ENST00000509692 UBE2D3P61077 147 aa11.27□□□□□ -0.6
SKP2-205ENST00000509692 UBE2D2P62837 147 aa11.27□□□□□ -0.6
SKP2-205ENST00000509692 MRAP2Q96G30 205 aa11.27□□□□□ -0.6
SKP2-205ENST00000509692 MRPL51Q4U2R6 128 aaKnown RBP11.27□□□□□ -0.61
SKP2-205ENST00000509692 RPL39LQ96EH5 51 aaKnown RBP11.27□□□□□ -0.61
SKP2-205ENST00000509692 GTSF1LQ9H1H1 148 aa11.27□□□□□ -0.61
SKP2-205ENST00000509692 PKHD1P08F94 4074 aa11.26□□□□□ -0.61
SKP2-205ENST00000509692 GAS8-AS1O95177 125 aa11.26□□□□□ -0.61
SKP2-205ENST00000509692 PKD1P98161 4303 aa11.26□□□□□ -0.61
SKP2-205ENST00000509692 SMKR1H3BMG3 65 aa11.25□□□□□ -0.61
SKP2-205ENST00000509692 TIRAPP58753 221 aa11.25□□□□□ -0.61
SKP2-205ENST00000509692 MRPS16Q9Y3D3 137 aaKnown RBP11.25□□□□□ -0.61
SKP2-205ENST00000509692 NCR2O95944 276 aa11.24□□□□□ -0.61
SKP2-205ENST00000509692 ELOBQ15370 118 aa11.24□□□□□ -0.61
SKP2-205ENST00000509692 OR10J3Q5JRS4 329 aa11.24□□□□□ -0.61
SKP2-205ENST00000509692 Q6ZR54 194 aa11.24□□□□□ -0.61
SKP2-205ENST00000509692 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.24□□□□□ -0.61
SKP2-205ENST00000509692 IGHV3-38A0A0C4DH36 116 aa11.24□□□□□ -0.61
SKP2-205ENST00000509692 CKS2P33552 79 aa11.24□□□□□ -0.61
SKP2-205ENST00000509692 RPS10P46783 165 aaKnown RBP11.24□□□□□ -0.61
SKP2-205ENST00000509692 TMEM136Q6ZRR5 245 aa11.24□□□□□ -0.61
SKP2-205ENST00000509692 DAZ4Q86SG3 579 aaKnown RBP11.24□□□□□ -0.61
SKP2-205ENST00000509692 DAZ3Q9NR90 486 aaKnown RBP11.24□□□□□ -0.61
SKP2-205ENST00000509692 TGIF2-C20orf24A0A0A6YYL0 155 aa11.23□□□□□ -0.61
SKP2-205ENST00000509692 UPK3BQ9BT76 320 aa11.23□□□□□ -0.61
SKP2-205ENST00000509692 SMCO4Q9NRQ5 59 aa11.23□□□□□ -0.61
SKP2-205ENST00000509692 DNAH11Q96DT5 4516 aa11.22□□□□□ -0.61
SKP2-205ENST00000509692 D6R8Y8 96 aa11.22□□□□□ -0.61
SKP2-205ENST00000509692 COX19Q49B96 90 aa11.22□□□□□ -0.61
SKP2-205ENST00000509692 CBLN2Q8IUK8 224 aa11.22□□□□□ -0.61
SKP2-205ENST00000509692 ST20Q9HBF5 79 aa11.22□□□□□ -0.61
SKP2-205ENST00000509692 TRBV24-1A0A075B6N3 115 aa11.21□□□□□ -0.61
SKP2-205ENST00000509692 TRBV6-5A0A0K0K1A5 114 aa11.21□□□□□ -0.61
SKP2-205ENST00000509692 PPP1R17O96001 155 aa11.21□□□□□ -0.61
SKP2-205ENST00000509692 LELP1Q5T871 98 aa11.21□□□□□ -0.61
SKP2-205ENST00000509692 NRACQ8N912 160 aa11.21□□□□□ -0.61
SKP2-205ENST00000509692 GNB1LQ9BYB4 327 aa11.21□□□□□ -0.61
SKP2-205ENST00000509692 RTL8CO15255 209 aa11.2□□□□□ -0.62
SKP2-205ENST00000509692 HLA-DQA1P01909 254 aa11.2□□□□□ -0.62
SKP2-205ENST00000509692 PPBPP02775 128 aa11.2□□□□□ -0.62
SKP2-205ENST00000509692 YPEL4Q96NS1 127 aa11.2□□□□□ -0.62
SKP2-205ENST00000509692 DYNC1H1Q14204 4646 aaKnown RBP11.2□□□□□ -0.62
SKP2-205ENST00000509692 TRAV8-6A0A0B4J262 113 aa11.2□□□□□ -0.62
SKP2-205ENST00000509692 SDHAF1A6NFY7 115 aa11.2□□□□□ -0.62
SKP2-205ENST00000509692 ORMDL3Q8N138 153 aa11.2□□□□□ -0.62
SKP2-205ENST00000509692 Q9H8V8 135 aa11.2□□□□□ -0.62
SKP2-205ENST00000509692 APCSP02743 223 aa11.19□□□□□ -0.62
SKP2-205ENST00000509692 TMEM97Q5BJF2 176 aa11.19□□□□□ -0.62
SKP2-205ENST00000509692 WFDC10BQ8IUB3 73 aa11.19□□□□□ -0.62
SKP2-205ENST00000509692 NBDYA0A0U1RRE5 68 aa11.18□□□□□ -0.62
SKP2-205ENST00000509692 TNFRSF6BO95407 300 aa11.18□□□□□ -0.62
SKP2-205ENST00000509692 MT-ND6P03923 174 aa11.18□□□□□ -0.62
SKP2-205ENST00000509692 PRELID3AQ96N28 172 aa11.18□□□□□ -0.62
SKP2-205ENST00000509692 TMEM70Q9BUB7 260 aa11.18□□□□□ -0.62
SKP2-205ENST00000509692 TRBV6-8A0A0A6YYG3 113 aa11.17□□□□□ -0.62
SKP2-205ENST00000509692 SIVA1O15304 175 aa11.17□□□□□ -0.62
SKP2-205ENST00000509692 ATP6V1G1O75348 118 aa11.17□□□□□ -0.62
SKP2-205ENST00000509692 NPYP01303 97 aa11.17□□□□□ -0.62
SKP2-205ENST00000509692 POLR2KP53803 58 aaKnown RBP11.17□□□□□ -0.62
SKP2-205ENST00000509692 SUMO2P61956 95 aaKnown RBP11.17□□□□□ -0.62
SKP2-205ENST00000509692 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms