RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 MRAP2Q96G30 205 aa10.3□□□□□ -0.76
RNF4-213ENST00000509388 NIT2Q9NQR4 276 aa10.3□□□□□ -0.76
RNF4-213ENST00000509388 SMCO4Q9NRQ5 59 aa10.3□□□□□ -0.76
RNF4-213ENST00000509388 DYNC2H1Q8NCM8 4307 aaKnown RBP10.29□□□□□ -0.76
RNF4-213ENST00000509388 LY6G6CO95867 125 aa10.29□□□□□ -0.76
RNF4-213ENST00000509388 COX19Q49B96 90 aa10.29□□□□□ -0.76
RNF4-213ENST00000509388 GATD1Q8NB37 220 aa10.29□□□□□ -0.76
RNF4-213ENST00000509388 NEXN-AS1Q8NBZ9 246 aa10.29□□□□□ -0.76
RNF4-213ENST00000509388 RNF185Q96GF1 192 aa10.29□□□□□ -0.76
RNF4-213ENST00000509388 Q9UF83 564 aa10.29□□□□□ -0.76
RNF4-213ENST00000509388 PPP1R17O96001 155 aa10.28□□□□□ -0.76
RNF4-213ENST00000509388 CKS2P33552 79 aa10.28□□□□□ -0.76
RNF4-213ENST00000509388 ESRGQ1W209 222 aa10.28□□□□□ -0.76
RNF4-213ENST00000509388 MRPL51Q4U2R6 128 aaKnown RBP10.28□□□□□ -0.76
RNF4-213ENST00000509388 OR10J3Q5JRS4 329 aa10.28□□□□□ -0.76
RNF4-213ENST00000509388 LGALS9CQ6DKI2 356 aa10.28□□□□□ -0.76
RNF4-213ENST00000509388 LYPD5Q6UWN5 251 aa10.28□□□□□ -0.76
RNF4-213ENST00000509388 UBE2D3P61077 147 aa10.27□□□□□ -0.77
RNF4-213ENST00000509388 UBE2D2P62837 147 aa10.27□□□□□ -0.77
RNF4-213ENST00000509388 GTSF1LQ9H1H1 148 aa10.27□□□□□ -0.77
RNF4-213ENST00000509388 NACAE9PAV3 2078 aa10.26□□□□□ -0.77
RNF4-213ENST00000509388 TGIF2-C20orf24A0A0A6YYL0 155 aa10.26□□□□□ -0.77
RNF4-213ENST00000509388 NCR2O95944 276 aa10.26□□□□□ -0.77
RNF4-213ENST00000509388 PPBPP02775 128 aa10.26□□□□□ -0.77
RNF4-213ENST00000509388 ELOBQ15370 118 aa10.26□□□□□ -0.77
RNF4-213ENST00000509388 DAZ4Q86SG3 579 aaKnown RBP10.26□□□□□ -0.77
RNF4-213ENST00000509388 RPL39LQ96EH5 51 aaKnown RBP10.26□□□□□ -0.77
RNF4-213ENST00000509388 DAZ3Q9NR90 486 aaKnown RBP10.26□□□□□ -0.77
RNF4-213ENST00000509388 IGHV3-38A0A0C4DH36 116 aa10.25□□□□□ -0.77
RNF4-213ENST00000509388 SMKR1H3BMG3 65 aa10.25□□□□□ -0.77
RNF4-213ENST00000509388 HLA-DQA1P01909 254 aa10.25□□□□□ -0.77
RNF4-213ENST00000509388 S100A1P23297 94 aa10.25□□□□□ -0.77
RNF4-213ENST00000509388 TMEM136Q6ZRR5 245 aa10.25□□□□□ -0.77
RNF4-213ENST00000509388 LINC00476Q8WZB0 136 aa10.25□□□□□ -0.77
RNF4-213ENST00000509388 GNB1LQ9BYB4 327 aa10.25□□□□□ -0.77
RNF4-213ENST00000509388 ST20Q9HBF5 79 aa10.25□□□□□ -0.77
RNF4-213ENST00000509388 LINC00588Q9Y4M8 146 aa10.25□□□□□ -0.77
RNF4-213ENST00000509388 STARD9Q9P2P6 4700 aa10.25□□□□□ -0.77
RNF4-213ENST00000509388 TRBV24-1A0A075B6N3 115 aa10.24□□□□□ -0.77
RNF4-213ENST00000509388 TRAV8-6A0A0B4J262 113 aa10.24□□□□□ -0.77
RNF4-213ENST00000509388 D6R8Y8 96 aa10.24□□□□□ -0.77
RNF4-213ENST00000509388 APCSP02743 223 aa10.24□□□□□ -0.77
RNF4-213ENST00000509388 LINC00694P0DN24 101 aa10.24□□□□□ -0.77
RNF4-213ENST00000509388 TIRAPP58753 221 aa10.24□□□□□ -0.77
RNF4-213ENST00000509388 TMEM97Q5BJF2 176 aa10.24□□□□□ -0.77
RNF4-213ENST00000509388 CBLN2Q8IUK8 224 aa10.24□□□□□ -0.77
RNF4-213ENST00000509388 ORMDL3Q8N138 153 aa10.24□□□□□ -0.77
RNF4-213ENST00000509388 PLECQ15149 4684 aaKnown RBP10.23□□□□□ -0.77
RNF4-213ENST00000509388 ATP6V1G1O75348 118 aa10.23□□□□□ -0.77
RNF4-213ENST00000509388 GAS8-AS1O95177 125 aa10.23□□□□□ -0.77
RNF4-213ENST00000509388 MT-ND6P03923 174 aa10.23□□□□□ -0.77
RNF4-213ENST00000509388 MRPS16Q9Y3D3 137 aaKnown RBP10.23□□□□□ -0.77
RNF4-213ENST00000509388 CSMD3Q7Z407 3707 aa10.23□□□□□ -0.77
RNF4-213ENST00000509388 TRBV6-5A0A0K0K1A5 114 aa10.22□□□□□ -0.77
RNF4-213ENST00000509388 SDHAF1A6NFY7 115 aa10.22□□□□□ -0.77
RNF4-213ENST00000509388 PMCHP20382 165 aa10.22□□□□□ -0.77
RNF4-213ENST00000509388 RPS10P46783 165 aaKnown RBP10.22□□□□□ -0.77
RNF4-213ENST00000509388 LELP1Q5T871 98 aa10.22□□□□□ -0.77
RNF4-213ENST00000509388 PRELID3AQ96N28 172 aa10.22□□□□□ -0.77
RNF4-213ENST00000509388 LCE6AA0A183 80 aa10.21□□□□□ -0.77
RNF4-213ENST00000509388 TNFRSF6BO95407 300 aa10.21□□□□□ -0.77
RNF4-213ENST00000509388 SUMO2P61956 95 aaKnown RBP10.21□□□□□ -0.77
RNF4-213ENST00000509388 FABP9Q0Z7S8 132 aa10.21□□□□□ -0.77
RNF4-213ENST00000509388 COTL1Q14019 142 aa10.21□□□□□ -0.77
RNF4-213ENST00000509388 MRPL18Q9H0U6 180 aaKnown RBP10.21□□□□□ -0.77
RNF4-213ENST00000509388 TRAPPC1Q9Y5R8 145 aa10.21□□□□□ -0.77
RNF4-213ENST00000509388 I3L3M4 83 aa10.2□□□□□ -0.78
RNF4-213ENST00000509388 VCYO14598 125 aa10.2□□□□□ -0.78
RNF4-213ENST00000509388 PHOX2AO14813 284 aa10.2□□□□□ -0.78
RNF4-213ENST00000509388 NRACQ8N912 160 aa10.2□□□□□ -0.78
RNF4-213ENST00000509388 C20orf78Q9BR46 151 aa10.2□□□□□ -0.78
RNF4-213ENST00000509388 UPK3BQ9BT76 320 aa10.2□□□□□ -0.78
RNF4-213ENST00000509388 Q9H8V8 135 aa10.2□□□□□ -0.78
RNF4-213ENST00000509388 LAMTOR2Q9Y2Q5 125 aa10.2□□□□□ -0.78
RNF4-213ENST00000509388 TRBV25-1A0A075B6N4 114 aa10.19□□□□□ -0.78
RNF4-213ENST00000509388 TRBV6-8A0A0A6YYG3 113 aa10.19□□□□□ -0.78
RNF4-213ENST00000509388 KIAA1644Q3SXP7 199 aa10.19□□□□□ -0.78
RNF4-213ENST00000509388 TMEM70Q9BUB7 260 aa10.19□□□□□ -0.78
RNF4-213ENST00000509388 TENM2Q9NT68 2774 aa10.19□□□□□ -0.78
RNF4-213ENST00000509388 SIVA1O15304 175 aa10.18□□□□□ -0.78
RNF4-213ENST00000509388 SCO1O75880 301 aa10.18□□□□□ -0.78
RNF4-213ENST00000509388 NPYP01303 97 aa10.18□□□□□ -0.78
RNF4-213ENST00000509388 DEFB104AQ8WTQ1 72 aa10.18□□□□□ -0.78
RNF4-213ENST00000509388 YPEL4Q96NS1 127 aa10.18□□□□□ -0.78
RNF4-213ENST00000509388 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
RNF4-213ENST00000509388 CHCHD5Q9BSY4 110 aa10.18□□□□□ -0.78
RNF4-213ENST00000509388 MAP1LC3AQ9H492 121 aa10.18□□□□□ -0.78
RNF4-213ENST00000509388 IGLV2-18A0A075B6J9 118 aa10.17□□□□□ -0.78
RNF4-213ENST00000509388 IGHV1-24A0A0C4DH33 117 aa10.17□□□□□ -0.78
RNF4-213ENST00000509388 TMEM262E9PQX1 116 aa10.17□□□□□ -0.78
RNF4-213ENST00000509388 FCER1GP30273 86 aa10.17□□□□□ -0.78
RNF4-213ENST00000509388 AMTP48728 403 aa10.17□□□□□ -0.78
RNF4-213ENST00000509388 POLR2KP53803 58 aaKnown RBP10.17□□□□□ -0.78
RNF4-213ENST00000509388 WFDC10BQ8IUB3 73 aa10.17□□□□□ -0.78
RNF4-213ENST00000509388 TRAV9-2A0A087WT02 112 aa10.16□□□□□ -0.78
RNF4-213ENST00000509388 TRBV27A0A0K0K1C4 114 aa10.16□□□□□ -0.78
RNF4-213ENST00000509388 LOC389332A0A1B0GUA5 103 aa10.16□□□□□ -0.78
RNF4-213ENST00000509388 NTM-AS1Q6ZSK4 140 aa10.16□□□□□ -0.78
RNF4-213ENST00000509388 A0A087WX48 190 aa10.15□□□□□ -0.78
RNF4-213ENST00000509388 UBE2L6O14933 153 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms