RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 HIGD1CA8MV81 97 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 ABCC5O15440 1437 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 SSSCA1O60232 199 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 UBE2D1P51668 147 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 SPATA45Q537H7 98 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 UNQ6190/PRO20217Q6UXQ8 127 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 DEFB132Q7Z7B7 95 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 C9orf62Q8N4C0 152 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 ZNF563Q8TA94 476 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 TSLPQ969D9 159 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 AMELYQ99218 206 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 DPY30Q9C005 99 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 MED9Q9NWA0 146 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 CC2D2AQ9P2K1 1620 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 ESPL1Q14674 2120 aa0.82□□□□□ -2.28
XRCC4-204ENST00000509268 AKAP12Q02952 1782 aa0.82□□□□□ -2.28
XRCC4-204ENST00000509268 ARHGAP5Q13017 1502 aa0.82□□□□□ -2.28
XRCC4-204ENST00000509268 ADGRL2O95490 1459 aa0.82□□□□□ -2.28
XRCC4-204ENST00000509268 TEX14Q8IWB6 1497 aa0.82□□□□□ -2.28
XRCC4-204ENST00000509268 SCAPERQ9BY12 1400 aa0.82□□□□□ -2.28
XRCC4-204ENST00000509268 IGLV3-32A0A0A0MS00 114 aa0.82□□□□□ -2.28
XRCC4-204ENST00000509268 PIGBOS1A0A0B4J2F0 54 aa0.82□□□□□ -2.28
XRCC4-204ENST00000509268 IGKV2-29A2NJV5 120 aaPredicted RBP0.82□□□□□ -2.28
XRCC4-204ENST00000509268 H3BQ15 152 aa0.82□□□□□ -2.28
XRCC4-204ENST00000509268 SIX6O95475 246 aa0.82□□□□□ -2.28
XRCC4-204ENST00000509268 RPL37AP61513 92 aaKnown RBP0.82□□□□□ -2.28
XRCC4-204ENST00000509268 SNURFQ9Y675 71 aa0.82□□□□□ -2.28
XRCC4-204ENST00000509268 ARAP2Q8WZ64 1704 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 PHRF1Q9P1Y6 1649 aaKnown RBP0.81□□□□□ -2.28
XRCC4-204ENST00000509268 CDK12Q9NYV4 1490 aaPredicted RBP0.81□□□□□ -2.28
XRCC4-204ENST00000509268 IGKV3D-7A0A0C4DH55 119 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 IGKV3OR2-268A0A0C4DH90 116 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 TEX49A0A1B0GTD5 131 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 hADV29S1A0JD25 119 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 GNGT2O14610 69 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 ATP5EP56381 51 aaPredicted RBP0.81□□□□□ -2.28
XRCC4-204ENST00000509268 FXYD3Q14802 87 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 GDF5OSQ5U4N7 250 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 KRTAP5-10Q6L8G5 202 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 ZNF818PQ6ZRF7 136 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 C4orf33Q8N1A6 199 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 C20orf197Q8N268 126 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 FAM213BQ8TBF2 198 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 VAMP8Q9BV40 100 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 V9GYS6 101 aa0.81□□□□□ -2.28
XRCC4-204ENST00000509268 TROQ12816 1431 aaPredicted RBP0.8□□□□□ -2.28
XRCC4-204ENST00000509268 ANKRD26Q9UPS8 1709 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 TRBV6-7A0A0A0MS04 114 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 LINC00032P0C843 101 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 IGLC1P0CG04 106 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 CCL3L1P16619 93 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 Q0VG73 95 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 C10orf128Q5T292 105 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 CYP2G1PQ6ZSU1 146 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 C5orf56Q8N8D9 126 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 LINC00208Q96KT6 92 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 CYP4F30PQ9H0H9 118 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 CYSTM1Q9H1C7 97 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 Q9H521 79 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 DOCK1Q14185 1865 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 GOLGA3Q08378 1498 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 DLEC1Q9Y238 1755 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 ABCA2Q9BZC7 2435 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 ANKRD36BQ8N2N9 1353 aa0.8□□□□□ -2.28
XRCC4-204ENST00000509268 ZNF142P52746 1687 aaPredicted RBP0.79□□□□□ -2.28
XRCC4-204ENST00000509268 HELZ2Q9BYK8 2649 aaKnown RBP0.79□□□□□ -2.28
XRCC4-204ENST00000509268 SHROOM2Q13796 1616 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 MYH8P13535 1937 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 A0A087WTM6 91 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 TRBV7-1A0A0A6YYK4 115 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 ELOF1P60002 83 aaKnown RBP0.79□□□□□ -2.28
XRCC4-204ENST00000509268 GNG11P61952 73 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 XAF1Q6GPH4 301 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 PRO1933Q9H354 126 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 NPVFQ9HCQ7 196 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 AP4S1Q9Y587 144 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 RB1CC1Q8TDY2 1594 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 MED12Q93074 2177 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 PATJQ8NI35 1801 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 MAGI1Q96QZ7 1491 aaPredicted RBP0.79□□□□□ -2.28
XRCC4-204ENST00000509268 TEP1Q99973 2627 aaKnown RBP0.79□□□□□ -2.28
XRCC4-204ENST00000509268 PPIP5K1Q6PFW1 1433 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 NSD3Q9BZ95 1437 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 CACNA1BQ00975 2339 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 TRBV7-3A0A075B6L6 115 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 IGKV2-40A0A087WW87 121 aaPredicted RBP0.79□□□□□ -2.28
XRCC4-204ENST00000509268 IGKV2D-40P01614 121 aaPredicted RBP0.79□□□□□ -2.28
XRCC4-204ENST00000509268 SEC11AP67812 179 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 SSBP1Q04837 148 aaKnown RBP0.79□□□□□ -2.28
XRCC4-204ENST00000509268 ZNF56Q15929 161 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 PYY3Q5JQD4 70 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 MYOZ3Q8TDC0 251 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 COX7B2Q8TF08 81 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 PMCHL2Q9BQD1 86 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 SCP2D1Q9UJQ7 156 aa0.79□□□□□ -2.28
XRCC4-204ENST00000509268 PRRC2BQ5JSZ5 2229 aaKnown RBP0.78□□□□□ -2.28
XRCC4-204ENST00000509268 TNS1Q9HBL0 1735 aaKnown RBP0.78□□□□□ -2.28
XRCC4-204ENST00000509268 BLMP54132 1417 aaPredicted RBP0.78□□□□□ -2.28
XRCC4-204ENST00000509268 CHD8Q9HCK8 2581 aa0.78□□□□□ -2.28
XRCC4-204ENST00000509268 ABCA3Q99758 1704 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms