RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 TMUB2Q71RG4 321 aa11.59□□□□□ -0.55
SKP2-204ENST00000508514 C1orf43Q9BWL3 253 aa11.59□□□□□ -0.55
SKP2-204ENST00000508514 VAX2Q9UIW0 290 aa11.59□□□□□ -0.55
SKP2-204ENST00000508514 UMAD1C9J7I0 102 aa11.58□□□□□ -0.56
SKP2-204ENST00000508514 USP17L23D6RBM5 183 aa11.58□□□□□ -0.56
SKP2-204ENST00000508514 ANGP03950 147 aaKnown RBP11.58□□□□□ -0.56
SKP2-204ENST00000508514 PRSS1P07477 247 aa11.58□□□□□ -0.56
SKP2-204ENST00000508514 CCL20P78556 96 aa11.58□□□□□ -0.56
SKP2-204ENST00000508514 DERL1Q9BUN8 251 aa11.58□□□□□ -0.56
SKP2-204ENST00000508514 SPANXN1Q5VSR9 72 aa11.57□□□□□ -0.56
SKP2-204ENST00000508514 CHCHD5Q9BSY4 110 aa11.57□□□□□ -0.56
SKP2-204ENST00000508514 PRR34Q9NV39 138 aa11.57□□□□□ -0.56
SKP2-204ENST00000508514 PKHD1L1Q86WI1 4243 aa11.56□□□□□ -0.56
SKP2-204ENST00000508514 HMSDA8MTL9 139 aa11.56□□□□□ -0.56
SKP2-204ENST00000508514 F5H697 171 aa11.56□□□□□ -0.56
SKP2-204ENST00000508514 IGLV2-8P01709 118 aa11.56□□□□□ -0.56
SKP2-204ENST00000508514 RPL35P42766 123 aaKnown RBP11.56□□□□□ -0.56
SKP2-204ENST00000508514 RBX1P62877 108 aa11.56□□□□□ -0.56
SKP2-204ENST00000508514 CRPP02741 224 aa11.55□□□□□ -0.56
SKP2-204ENST00000508514 H2AFB1P0C5Y9 115 aa11.55□□□□□ -0.56
SKP2-204ENST00000508514 GZMBP10144 247 aa11.55□□□□□ -0.56
SKP2-204ENST00000508514 C14orf177Q52M58 125 aa11.55□□□□□ -0.56
SKP2-204ENST00000508514 HMCN2Q8NDA2 5059 aa11.55□□□□□ -0.56
SKP2-204ENST00000508514 PANO1I0J062 215 aa11.54□□□□□ -0.56
SKP2-204ENST00000508514 M0QY20 66 aa11.54□□□□□ -0.56
SKP2-204ENST00000508514 BCL2L11O43521 198 aa11.54□□□□□ -0.56
SKP2-204ENST00000508514 PFDN1O60925 122 aa11.54□□□□□ -0.56
SKP2-204ENST00000508514 HLA-DQA1P01909 254 aa11.54□□□□□ -0.56
SKP2-204ENST00000508514 GAGE6Q13070 117 aa11.54□□□□□ -0.56
SKP2-204ENST00000508514 MIAQ16674 131 aa11.54□□□□□ -0.56
SKP2-204ENST00000508514 CLPSL2Q6UWE3 100 aa11.54□□□□□ -0.56
SKP2-204ENST00000508514 LINC00269Q8N2A0 174 aa11.54□□□□□ -0.56
SKP2-204ENST00000508514 IGLC6P0CF74 106 aa11.53□□□□□ -0.56
SKP2-204ENST00000508514 HNRNPA3P51991 378 aaKnown RBP11.53□□□□□ -0.56
SKP2-204ENST00000508514 C11orf52Q96A22 123 aa11.53□□□□□ -0.56
SKP2-204ENST00000508514 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.53□□□□□ -0.56
SKP2-204ENST00000508514 A0A0D9SG52 128 aa11.52□□□□□ -0.57
SKP2-204ENST00000508514 IQCJQ1A5X6 159 aa11.52□□□□□ -0.57
SKP2-204ENST00000508514 C9orf163Q8N9P6 203 aa11.52□□□□□ -0.57
SKP2-204ENST00000508514 DAZAP1Q96EP5 407 aaKnown RBP11.52□□□□□ -0.57
SKP2-204ENST00000508514 C19orf71A6NCJ1 209 aa11.51□□□□□ -0.57
SKP2-204ENST00000508514 DGAT2L7PQ6IED9 249 aa11.51□□□□□ -0.57
SKP2-204ENST00000508514 AP1S3Q96PC3 154 aa11.51□□□□□ -0.57
SKP2-204ENST00000508514 GNG13Q9P2W3 67 aa11.51□□□□□ -0.57
SKP2-204ENST00000508514 KANTRA0A1W2PQU2 76 aa11.5□□□□□ -0.57
SKP2-204ENST00000508514 RAB19A4D1S5 217 aa11.5□□□□□ -0.57
SKP2-204ENST00000508514 OXTP01178 125 aa11.5□□□□□ -0.57
SKP2-204ENST00000508514 PKIAP61925 76 aa11.5□□□□□ -0.57
SKP2-204ENST00000508514 TMEM97Q5BJF2 176 aa11.5□□□□□ -0.57
SKP2-204ENST00000508514 CENPWQ5EE01 88 aa11.5□□□□□ -0.57
SKP2-204ENST00000508514 SUMO4Q6EEV6 95 aa11.5□□□□□ -0.57
SKP2-204ENST00000508514 SDIM1Q6ZPB5 146 aa11.5□□□□□ -0.57
SKP2-204ENST00000508514 C20orf203Q8NBC4 194 aa11.5□□□□□ -0.57
SKP2-204ENST00000508514 GFRA4Q9GZZ7 299 aa11.5□□□□□ -0.57
SKP2-204ENST00000508514 TRBV25-1A0A075B6N4 114 aa11.49□□□□□ -0.57
SKP2-204ENST00000508514 TRAV1-1A0A0B4J248 108 aa11.49□□□□□ -0.57
SKP2-204ENST00000508514 SMIM17P0DL12 118 aa11.49□□□□□ -0.57
SKP2-204ENST00000508514 FER1L6-AS1Q8NA97 138 aa11.49□□□□□ -0.57
SKP2-204ENST00000508514 TRBV20OR9-2A0A075B6H5 130 aa11.48□□□□□ -0.57
SKP2-204ENST00000508514 IGLV4-60A0A075B6I1 120 aa11.48□□□□□ -0.57
SKP2-204ENST00000508514 MGPP08493 103 aa11.48□□□□□ -0.57
SKP2-204ENST00000508514 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.48□□□□□ -0.57
SKP2-204ENST00000508514 OR2D3Q8NGH3 330 aa11.48□□□□□ -0.57
SKP2-204ENST00000508514 TPPP3Q9BW30 176 aa11.48□□□□□ -0.57
SKP2-204ENST00000508514 IGLV10-54A0A075B6I4 117 aa11.47□□□□□ -0.57
SKP2-204ENST00000508514 IGHV1-24A0A0C4DH33 117 aa11.47□□□□□ -0.57
SKP2-204ENST00000508514 SLPIP03973 132 aa11.47□□□□□ -0.57
SKP2-204ENST00000508514 NKX2-5P52952 324 aaPredicted RBP11.47□□□□□ -0.57
SKP2-204ENST00000508514 RPL37AP61513 92 aaKnown RBP11.47□□□□□ -0.57
SKP2-204ENST00000508514 REG3AQ06141 175 aa11.47□□□□□ -0.57
SKP2-204ENST00000508514 MANBALQ9NQG1 85 aa11.47□□□□□ -0.57
SKP2-204ENST00000508514 SERTAD4-AS1Q5TG53 156 aa11.45□□□□□ -0.58
SKP2-204ENST00000508514 A0A1B0GUV1 79 aa11.44□□□□□ -0.58
SKP2-204ENST00000508514 RPS20P60866 119 aaKnown RBP11.44□□□□□ -0.58
SKP2-204ENST00000508514 CACNG7P62955 275 aa11.44□□□□□ -0.58
SKP2-204ENST00000508514 EIF5AP63241 154 aaKnown RBP11.44□□□□□ -0.58
SKP2-204ENST00000508514 CIRBPQ14011 172 aaKnown RBP11.44□□□□□ -0.58
SKP2-204ENST00000508514 LYZL1Q6UWQ5 148 aa11.44□□□□□ -0.58
SKP2-204ENST00000508514 NTF3P20783 257 aa11.43□□□□□ -0.58
SKP2-204ENST00000508514 CNBPP62633 177 aaKnown RBP11.43□□□□□ -0.58
SKP2-204ENST00000508514 RASL11AQ6T310 242 aa11.43□□□□□ -0.58
SKP2-204ENST00000508514 CLRN3Q8NCR9 226 aa11.43□□□□□ -0.58
SKP2-204ENST00000508514 UBR4Q5T4S7 5183 aa11.42□□□□□ -0.58
SKP2-204ENST00000508514 F2Z2F3 143 aa11.42□□□□□ -0.58
SKP2-204ENST00000508514 H7C1H1 209 aa11.42□□□□□ -0.58
SKP2-204ENST00000508514 GNG4P50150 75 aa11.42□□□□□ -0.58
SKP2-204ENST00000508514 RAB5CP51148 216 aa11.42□□□□□ -0.58
SKP2-204ENST00000508514 C9orf62Q8N4C0 152 aa11.42□□□□□ -0.58
SKP2-204ENST00000508514 SMIM12Q96EX1 92 aa11.42□□□□□ -0.58
SKP2-204ENST00000508514 TMEM243Q9BU79 118 aa11.42□□□□□ -0.58
SKP2-204ENST00000508514 NIT2Q9NQR4 276 aa11.42□□□□□ -0.58
SKP2-204ENST00000508514 P01737 135 aa11.41□□□□□ -0.58
SKP2-204ENST00000508514 SULT1A2P50226 295 aa11.41□□□□□ -0.58
SKP2-204ENST00000508514 MEF2BQ02080 365 aaPredicted RBP11.41□□□□□ -0.58
SKP2-204ENST00000508514 PGLYRP4Q96LB8 373 aa11.41□□□□□ -0.58
SKP2-204ENST00000508514 TRAV8-4A0A0B4J246 113 aa11.4□□□□□ -0.58
SKP2-204ENST00000508514 hDV102S1A0JD36 115 aa11.4□□□□□ -0.58
SKP2-204ENST00000508514 IFNA1P01562 189 aa11.4□□□□□ -0.58
SKP2-204ENST00000508514 MT1HL1P0DM35 61 aa11.4□□□□□ -0.58
SKP2-204ENST00000508514 NUDT10Q8NFP7 164 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms