RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 OR2D3Q8NGH3 330 aa8.43□□□□□ -1.06
NR1I3-225ENST00000508387 TMEM70Q9BUB7 260 aa8.43□□□□□ -1.06
NR1I3-225ENST00000508387 A0A087WX48 190 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 TMEM262E9PQX1 116 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 INAFM2P0DMQ5 153 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 GNG4P50150 75 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 TOR2AQ5JU69 321 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 ENHOQ6UWT2 76 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 Q6ZNX1 250 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 C15orf54Q8N8G6 183 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 Q8N976 141 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 FER1L6-AS1Q8NA97 138 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 DEFB104AQ8WTQ1 72 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 FRZBQ92765 325 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 AP1S3Q96PC3 154 aa8.42□□□□□ -1.06
NR1I3-225ENST00000508387 SUMO4Q6EEV6 95 aa8.41□□□□□ -1.06
NR1I3-225ENST00000508387 CLPSL2Q6UWE3 100 aa8.41□□□□□ -1.06
NR1I3-225ENST00000508387 SLC51BQ86UW2 128 aa8.41□□□□□ -1.06
NR1I3-225ENST00000508387 C9orf62Q8N4C0 152 aa8.41□□□□□ -1.06
NR1I3-225ENST00000508387 MED9Q9NWA0 146 aa8.41□□□□□ -1.06
NR1I3-225ENST00000508387 K7EN84 100 aa8.4□□□□□ -1.06
NR1I3-225ENST00000508387 EIF5AL1Q6IS14 154 aaKnown RBP8.4□□□□□ -1.06
NR1I3-225ENST00000508387 Q6ZSA8 131 aa8.4□□□□□ -1.06
NR1I3-225ENST00000508387 DAZAP1Q96EP5 407 aaKnown RBP8.4□□□□□ -1.06
NR1I3-225ENST00000508387 CHCHD5Q9BSY4 110 aa8.4□□□□□ -1.06
NR1I3-225ENST00000508387 TEX46H3BTG2 121 aa8.39□□□□□ -1.07
NR1I3-225ENST00000508387 M0QY20 66 aa8.39□□□□□ -1.07
NR1I3-225ENST00000508387 PDE6DO43924 150 aa8.39□□□□□ -1.07
NR1I3-225ENST00000508387 IFNA1P01562 189 aa8.39□□□□□ -1.07
NR1I3-225ENST00000508387 P01737 135 aa8.39□□□□□ -1.07
NR1I3-225ENST00000508387 ANGP03950 147 aaKnown RBP8.39□□□□□ -1.07
NR1I3-225ENST00000508387 SMIM17P0DL12 118 aa8.39□□□□□ -1.07
NR1I3-225ENST00000508387 GAGE6Q13070 117 aa8.39□□□□□ -1.07
NR1I3-225ENST00000508387 ATRAIDQ6UW56 229 aa8.39□□□□□ -1.07
NR1I3-225ENST00000508387 LYZL1Q6UWQ5 148 aa8.39□□□□□ -1.07
NR1I3-225ENST00000508387 CHCHD7Q9BUK0 85 aa8.39□□□□□ -1.07
NR1I3-225ENST00000508387 VAX2Q9UIW0 290 aa8.39□□□□□ -1.07
NR1I3-225ENST00000508387 NKX2-5P52952 324 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-225ENST00000508387 KCNIP4Q6PIL6 250 aa8.38□□□□□ -1.07
NR1I3-225ENST00000508387 ALKAL2Q6UX46 152 aa8.38□□□□□ -1.07
NR1I3-225ENST00000508387 NUDT10Q8NFP7 164 aa8.38□□□□□ -1.07
NR1I3-225ENST00000508387 RMI2Q96E14 147 aa8.38□□□□□ -1.07
NR1I3-225ENST00000508387 NUDT11Q96G61 164 aa8.38□□□□□ -1.07
NR1I3-225ENST00000508387 RNASE7Q9H1E1 156 aaKnown RBP8.38□□□□□ -1.07
NR1I3-225ENST00000508387 HLA-DQA1P01909 254 aa8.37□□□□□ -1.07
NR1I3-225ENST00000508387 CRPP02741 224 aa8.37□□□□□ -1.07
NR1I3-225ENST00000508387 RPS20P60866 119 aaKnown RBP8.37□□□□□ -1.07
NR1I3-225ENST00000508387 AKAP14Q86UN6 197 aa8.37□□□□□ -1.07
NR1I3-225ENST00000508387 SMIM12Q96EX1 92 aa8.37□□□□□ -1.07
NR1I3-225ENST00000508387 C1orf43Q9BWL3 253 aa8.37□□□□□ -1.07
NR1I3-225ENST00000508387 COX11Q9Y6N1 276 aa8.37□□□□□ -1.07
NR1I3-225ENST00000508387 FAT3Q8TDW7 4589 aa8.37□□□□□ -1.07
NR1I3-225ENST00000508387 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
NR1I3-225ENST00000508387 NTF3P20783 257 aa8.36□□□□□ -1.07
NR1I3-225ENST00000508387 CTRLP40313 264 aa8.36□□□□□ -1.07
NR1I3-225ENST00000508387 RBX1P62877 108 aa8.36□□□□□ -1.07
NR1I3-225ENST00000508387 CACNG7P62955 275 aa8.36□□□□□ -1.07
NR1I3-225ENST00000508387 ELOBQ15370 118 aa8.36□□□□□ -1.07
NR1I3-225ENST00000508387 SCXQ7RTU7 201 aa8.36□□□□□ -1.07
NR1I3-225ENST00000508387 OCC1Q8TAD7 63 aa8.36□□□□□ -1.07
NR1I3-225ENST00000508387 SRRM2Q9UQ35 2752 aaKnown RBP8.36□□□□□ -1.07
NR1I3-225ENST00000508387 TRAV26-2A0A0B4J265 109 aa8.35□□□□□ -1.07
NR1I3-225ENST00000508387 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
NR1I3-225ENST00000508387 Q0VG73 95 aa8.35□□□□□ -1.07
NR1I3-225ENST00000508387 KRTAP26-1Q6PEX3 210 aa8.35□□□□□ -1.07
NR1I3-225ENST00000508387 LINC00269Q8N2A0 174 aa8.35□□□□□ -1.07
NR1I3-225ENST00000508387 GFRA4Q9GZZ7 299 aa8.35□□□□□ -1.07
NR1I3-225ENST00000508387 RPP21Q9H633 154 aaKnown RBP8.35□□□□□ -1.07
NR1I3-225ENST00000508387 LRP1Q07954 4544 aaKnown RBP8.34□□□□□ -1.07
NR1I3-225ENST00000508387 TRBV25-1A0A075B6N4 114 aa8.34□□□□□ -1.07
NR1I3-225ENST00000508387 USP17L23D6RBM5 183 aa8.34□□□□□ -1.07
NR1I3-225ENST00000508387 FOXA3P55318 350 aaPredicted RBP8.34□□□□□ -1.07
NR1I3-225ENST00000508387 IQCJQ1A5X6 159 aa8.34□□□□□ -1.07
NR1I3-225ENST00000508387 RASL11AQ6T310 242 aa8.34□□□□□ -1.07
NR1I3-225ENST00000508387 LINC00528Q8N1L1 170 aa8.34□□□□□ -1.07
NR1I3-225ENST00000508387 GTSF1Q8WW33 167 aa8.34□□□□□ -1.07
NR1I3-225ENST00000508387 DPH3P1Q9H4G8 78 aa8.34□□□□□ -1.07
NR1I3-225ENST00000508387 IGLV4-60A0A075B6I1 120 aa8.33□□□□□ -1.08
NR1I3-225ENST00000508387 IGLV10-54A0A075B6I4 117 aa8.33□□□□□ -1.08
NR1I3-225ENST00000508387 IGHV1-24A0A0C4DH33 117 aa8.33□□□□□ -1.08
NR1I3-225ENST00000508387 A0A1B0GVG6 124 aa8.33□□□□□ -1.08
NR1I3-225ENST00000508387 XKRY2A2RUG3 117 aa8.33□□□□□ -1.08
NR1I3-225ENST00000508387 F2Z2F3 143 aa8.33□□□□□ -1.08
NR1I3-225ENST00000508387 TRGC1P0CF51 173 aa8.33□□□□□ -1.08
NR1I3-225ENST00000508387 CEBPGP53567 150 aa8.33□□□□□ -1.08
NR1I3-225ENST00000508387 C20orf203Q8NBC4 194 aa8.33□□□□□ -1.08
NR1I3-225ENST00000508387 PRR34Q9NV39 138 aa8.33□□□□□ -1.08
NR1I3-225ENST00000508387 PRSS1P07477 247 aa8.32□□□□□ -1.08
NR1I3-225ENST00000508387 TWIST1Q15672 202 aa8.32□□□□□ -1.08
NR1I3-225ENST00000508387 TMEM97Q5BJF2 176 aa8.32□□□□□ -1.08
NR1I3-225ENST00000508387 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-225ENST00000508387 GATD1Q8NB37 220 aa8.32□□□□□ -1.08
NR1I3-225ENST00000508387 RPL39LQ96EH5 51 aaKnown RBP8.32□□□□□ -1.08
NR1I3-225ENST00000508387 H7C1H1 209 aa8.31□□□□□ -1.08
NR1I3-225ENST00000508387 MIAQ16674 131 aa8.31□□□□□ -1.08
NR1I3-225ENST00000508387 CIRBP-AS1Q8TBR5 109 aa8.31□□□□□ -1.08
NR1I3-225ENST00000508387 CNFNQ9BYD5 112 aa8.31□□□□□ -1.08
NR1I3-225ENST00000508387 BIN3Q9NQY0 253 aa8.31□□□□□ -1.08
NR1I3-225ENST00000508387 TAGLN2P37802 199 aaKnown RBP8.3□□□□□ -1.08
NR1I3-225ENST00000508387 REG3AQ06141 175 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms