RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 A6NDX4 124 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 F6UB75 175 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 H7C2G1 150 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 IGHV3-30-3P0DP02 117 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 NBL1P41271 181 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 MRPS36P82909 103 aaKnown RBP3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 TCF15Q12870 199 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 MIAQ16674 131 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 DCANP1Q8TF63 244 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 NTN5Q8WTR8 489 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 DNAJC30Q96LL9 226 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 PIMREGQ9BSJ6 248 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 BPESC1Q9GZL8 116 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 PLA2G2DQ9UNK4 145 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 TNFRSF18Q9Y5U5 241 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 ICOSQ9Y6W8 199 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 OTOGLQ3ZCN5 2332 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 A0A0J9YXV3 536 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 SPRY2O43597 315 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 TGFAP01135 160 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 TRBV12-3P01733 135 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 IGHV3-11P01762 117 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 IGHV4-39P01824 125 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 PLA2G1BP04054 148 aaKnown RBP3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 PRSS2P07478 247 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 SLURP1P55000 103 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 DEFB121Q5J5C9 76 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 IMUPQ9GZP8 106 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 PPDPFQ9H3Y8 114 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 JPT2Q9H910 190 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 NDUFA12Q9UI09 145 aa3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 RP1L1Q8IWN7 2480 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P16-201ENST00000508037 IGKV3-7A0A075B6H7 116 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 H3BUX3 64 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 K7EQG2 157 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 LST1O00453 97 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 TRIAP1O43715 76 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 GATA3P23771 443 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 TIRAPP58753 221 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 CFHR3Q02985 330 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 ZNF415Q09FC8 603 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 C15orf53Q8NAA6 179 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 TMEM101Q96IK0 257 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 VSIG2Q96IQ7 327 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 OVOL2Q9BRP0 275 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 SPXQ9BT56 116 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 TMEM126AQ9H061 195 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 PRORYQ9H606 182 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 BEX4Q9NWD9 120 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 LINC00527Q9UJ94 153 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 X6R8D5 127 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 POLEQ07864 2286 aa3.66□□□□□ -1.82
HMGB3P16-201ENST00000508037 TPRP12270 2363 aaKnown RBP3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 IGHV3-64A0A075B6Q5 118 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 TRAV4A0A0B4J268 109 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 TRBV7-7A0A0K0K1E9 115 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 TEX49A0A1B0GTD5 131 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 B5MCH6 92 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 H7C423 109 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 NDUFA1O15239 70 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 ATP5G1P05496 136 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 DEFB1P60022 68 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 LY6EQ16553 131 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 TMEM61Q8N0U2 210 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 LITAFQ99732 161 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 LINC00467Q9BRT7 94 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 WNK2Q9Y3S1 2297 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 USP34Q70CQ2 3546 aa3.65□□□□□ -1.83
HMGB3P16-201ENST00000508037 SPEGQ15772 3267 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 APC2O95996 2303 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 ANKHD1Q8IWZ3 2542 aaKnown RBP3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 IGHV3OR16-10A0A075B7F0 116 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 IGLV5-45A0A087WSX0 123 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 COX7A2LO14548 114 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 TRACP01848 142 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 ELANEP08246 267 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 NHLRC4P0CG21 123 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 INAFM2P0DMQ5 153 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 PSMB8P28062 276 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 DSCR9P59020 149 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 HERVK_113P63121 156 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 HERV-K104P63124 156 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 CDSNQ15517 529 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 SPINK13Q1W4C9 94 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 DGAT2L7PQ6IED9 249 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 BRD3OSQ6XYD6 125 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 LINC00482Q8N8I6 264 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 OPRPNQ99935 248 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 SS18L2Q9UHA2 77 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 PCNX1Q96RV3 2341 aa3.64□□□□□ -1.83
HMGB3P16-201ENST00000508037 CACNA1HO95180 2353 aa3.63□□□□□ -1.83
HMGB3P16-201ENST00000508037 ARHGAP32A7KAX9 2087 aa3.63□□□□□ -1.83
HMGB3P16-201ENST00000508037 TRAV12-2A0A075B6T6 113 aa3.63□□□□□ -1.83
HMGB3P16-201ENST00000508037 A8MTW9 85 aa3.63□□□□□ -1.83
HMGB3P16-201ENST00000508037 MSMBP08118 114 aa3.63□□□□□ -1.83
HMGB3P16-201ENST00000508037 CXCL5P42830 114 aa3.63□□□□□ -1.83
HMGB3P16-201ENST00000508037 LY6DQ14210 128 aa3.63□□□□□ -1.83
HMGB3P16-201ENST00000508037 LINC00643Q86TS7 51 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms