RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PGLYRP4Q96LB8 373 aa5.88□□□□□ -1.47
PDGFC-205ENST00000506880 LYSTQ99698 3801 aa5.88□□□□□ -1.47
PDGFC-205ENST00000506880 TPPP3Q9BW30 176 aa5.88□□□□□ -1.47
PDGFC-205ENST00000506880 GTSF1LQ9H1H1 148 aa5.88□□□□□ -1.47
PDGFC-205ENST00000506880 STARD9Q9P2P6 4700 aa5.88□□□□□ -1.47
PDGFC-205ENST00000506880 TRAV8-6A0A0B4J262 113 aa5.87□□□□□ -1.47
PDGFC-205ENST00000506880 TRBV6-5A0A0K0K1A5 114 aa5.87□□□□□ -1.47
PDGFC-205ENST00000506880 NCR2O95944 276 aa5.87□□□□□ -1.47
PDGFC-205ENST00000506880 NUDT3O95989 172 aa5.87□□□□□ -1.47
PDGFC-205ENST00000506880 LINC00315P59091 139 aa5.87□□□□□ -1.47
PDGFC-205ENST00000506880 RPL32P62910 135 aaKnown RBP5.87□□□□□ -1.47
PDGFC-205ENST00000506880 ZNF56Q15929 161 aa5.87□□□□□ -1.47
PDGFC-205ENST00000506880 LELP1Q5T871 98 aa5.87□□□□□ -1.47
PDGFC-205ENST00000506880 FAM74A4Q5TZK3 123 aa5.87□□□□□ -1.47
PDGFC-205ENST00000506880 UBE2DNLQ8IWF7 75 aa5.87□□□□□ -1.47
PDGFC-205ENST00000506880 ATP6V0E2Q8NHE4 81 aa5.87□□□□□ -1.47
PDGFC-205ENST00000506880 NIT2Q9NQR4 276 aa5.87□□□□□ -1.47
PDGFC-205ENST00000506880 A0A1B0GXF2 115 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 F5H697 171 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 M0QY20 66 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 MT-ND6P03923 174 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 GZMBP10144 247 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 ADCYAP1P18509 176 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 EVI2AP22794 236 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 UBE2D3P61077 147 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 UBE2D2P62837 147 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 SMAGPQ0VAQ4 97 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 C14orf178Q8N769 122 aaPredicted RBP5.86□□□□□ -1.47
PDGFC-205ENST00000506880 KRTAP9-9Q9BYP9 154 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 KRTAP9-4Q9BYQ2 154 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 TNFRSF18Q9Y5U5 241 aa5.86□□□□□ -1.47
PDGFC-205ENST00000506880 TRBV24-1A0A075B6N3 115 aa5.85□□□□□ -1.47
PDGFC-205ENST00000506880 A0A087WWL8 130 aa5.85□□□□□ -1.47
PDGFC-205ENST00000506880 A0A0J9YY99 117 aa5.85□□□□□ -1.47
PDGFC-205ENST00000506880 H7C423 109 aa5.85□□□□□ -1.47
PDGFC-205ENST00000506880 K7EMI3 77 aa5.85□□□□□ -1.47
PDGFC-205ENST00000506880 LAGE3Q14657 143 aa5.85□□□□□ -1.47
PDGFC-205ENST00000506880 ELOBQ15370 118 aa5.85□□□□□ -1.47
PDGFC-205ENST00000506880 FAM104BQ5XKR9 115 aa5.85□□□□□ -1.47
PDGFC-205ENST00000506880 LYPD5Q6UWN5 251 aa5.85□□□□□ -1.47
PDGFC-205ENST00000506880 CLRN3Q8NCR9 226 aa5.85□□□□□ -1.47
PDGFC-205ENST00000506880 C20orf78Q9BR46 151 aa5.85□□□□□ -1.47
PDGFC-205ENST00000506880 SAMD10Q9BYL1 202 aa5.85□□□□□ -1.47
PDGFC-205ENST00000506880 LINC01549A6NIU2 74 aa5.84□□□□□ -1.47
PDGFC-205ENST00000506880 SIVA1O15304 175 aa5.84□□□□□ -1.47
PDGFC-205ENST00000506880 LY6G6CO95867 125 aa5.84□□□□□ -1.47
PDGFC-205ENST00000506880 DNAH10OSP0CZ25 163 aa5.84□□□□□ -1.47
PDGFC-205ENST00000506880 ESRGQ1W209 222 aa5.84□□□□□ -1.47
PDGFC-205ENST00000506880 LINC01556Q5JQF7 62 aa5.84□□□□□ -1.47
PDGFC-205ENST00000506880 NFE4Q86UQ8 179 aa5.84□□□□□ -1.47
PDGFC-205ENST00000506880 NEXN-AS1Q8NBZ9 246 aa5.84□□□□□ -1.47
PDGFC-205ENST00000506880 ZNRF2Q8NHG8 242 aa5.84□□□□□ -1.47
PDGFC-205ENST00000506880 JPT2Q9H910 190 aa5.84□□□□□ -1.47
PDGFC-205ENST00000506880 ALMS1Q8TCU4 4167 aa5.84□□□□□ -1.47
PDGFC-205ENST00000506880 DNAH6Q9C0G6 4158 aa5.83□□□□□ -1.48
PDGFC-205ENST00000506880 C7orf77A4D0Y5 90 aa5.83□□□□□ -1.48
PDGFC-205ENST00000506880 HLA-DQA1P01909 254 aa5.83□□□□□ -1.48
PDGFC-205ENST00000506880 RAB4AP20338 218 aa5.83□□□□□ -1.48
PDGFC-205ENST00000506880 G0S2P27469 103 aa5.83□□□□□ -1.48
PDGFC-205ENST00000506880 SUMO4Q6EEV6 95 aa5.83□□□□□ -1.48
PDGFC-205ENST00000506880 GNB1LQ9BYB4 327 aa5.83□□□□□ -1.48
PDGFC-205ENST00000506880 Q9H8V8 135 aa5.83□□□□□ -1.48
PDGFC-205ENST00000506880 MSRB1Q9NZV6 116 aa5.83□□□□□ -1.48
PDGFC-205ENST00000506880 LINC00588Q9Y4M8 146 aa5.83□□□□□ -1.48
PDGFC-205ENST00000506880 TRBV25-1A0A075B6N4 114 aa5.82□□□□□ -1.48
PDGFC-205ENST00000506880 TRBV6-8A0A0A6YYG3 113 aa5.82□□□□□ -1.48
PDGFC-205ENST00000506880 IGHV3-38A0A0C4DH36 116 aa5.82□□□□□ -1.48
PDGFC-205ENST00000506880 TRBV27A0A0K0K1C4 114 aa5.82□□□□□ -1.48
PDGFC-205ENST00000506880 PRSS47A8MTI9 375 aa5.82□□□□□ -1.48
PDGFC-205ENST00000506880 MGPP08493 103 aa5.82□□□□□ -1.48
PDGFC-205ENST00000506880 PLECQ15149 4684 aaKnown RBP5.82□□□□□ -1.48
PDGFC-205ENST00000506880 IQCJQ1A5X6 159 aa5.82□□□□□ -1.48
PDGFC-205ENST00000506880 Q6ZSN1 163 aa5.82□□□□□ -1.48
PDGFC-205ENST00000506880 LINC00336Q6ZUF6 198 aa5.82□□□□□ -1.48
PDGFC-205ENST00000506880 ORMDL3Q8N138 153 aa5.82□□□□□ -1.48
PDGFC-205ENST00000506880 COX11Q9Y6N1 276 aa5.82□□□□□ -1.48
PDGFC-205ENST00000506880 DNAH1Q9P2D7 4330 aa5.82□□□□□ -1.48
PDGFC-205ENST00000506880 IGHV3-73A0A0B4J1V6 119 aa5.81□□□□□ -1.48
PDGFC-205ENST00000506880 IGHV1-24A0A0C4DH33 117 aa5.81□□□□□ -1.48
PDGFC-205ENST00000506880 NBDYA0A0U1RRE5 68 aa5.81□□□□□ -1.48
PDGFC-205ENST00000506880 A0A1B0GUV1 79 aa5.81□□□□□ -1.48
PDGFC-205ENST00000506880 VCYO14598 125 aa5.81□□□□□ -1.48
PDGFC-205ENST00000506880 APOC3P02656 99 aa5.81□□□□□ -1.48
PDGFC-205ENST00000506880 COTL1Q14019 142 aa5.81□□□□□ -1.48
PDGFC-205ENST00000506880 OR10J3Q5JRS4 329 aa5.81□□□□□ -1.48
PDGFC-205ENST00000506880 Q6ZR54 194 aa5.81□□□□□ -1.48
PDGFC-205ENST00000506880 ST20Q9HBF5 79 aa5.81□□□□□ -1.48
PDGFC-205ENST00000506880 URGCP-MRPS24S4R325 110 aa5.81□□□□□ -1.48
PDGFC-205ENST00000506880 GAGE12JA6NER3 117 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 I3L3M4 83 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 NPSP0C0P6 89 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 ZNF25P17030 456 aaPredicted RBP5.8□□□□□ -1.48
PDGFC-205ENST00000506880 CKS2P33552 79 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 POLR2KP53803 58 aaKnown RBP5.8□□□□□ -1.48
PDGFC-205ENST00000506880 SUMO2P61956 95 aaKnown RBP5.8□□□□□ -1.48
PDGFC-205ENST00000506880 Q0VG73 95 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 GAGE1Q13065 139 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 GAGE4Q13068 117 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 GAGE5Q13069 117 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 GAGE13Q4V321 117 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms