RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 COX11Q9Y6N1 276 aa9.44□□□□□ -0.9
CDC42SE2-209ENST00000506419 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
CDC42SE2-209ENST00000506419 F5H697 171 aa9.43□□□□□ -0.9
CDC42SE2-209ENST00000506419 MANBALQ9NQG1 85 aa9.43□□□□□ -0.9
CDC42SE2-209ENST00000506419 C19orf71A6NCJ1 209 aa9.42□□□□□ -0.9
CDC42SE2-209ENST00000506419 IGLC6P0CF74 106 aa9.42□□□□□ -0.9
CDC42SE2-209ENST00000506419 SULT1A2P50226 295 aa9.42□□□□□ -0.9
CDC42SE2-209ENST00000506419 RAB5CP51148 216 aa9.42□□□□□ -0.9
CDC42SE2-209ENST00000506419 ELOBQ15370 118 aa9.42□□□□□ -0.9
CDC42SE2-209ENST00000506419 CENPWQ5EE01 88 aa9.42□□□□□ -0.9
CDC42SE2-209ENST00000506419 Q8N976 141 aa9.42□□□□□ -0.9
CDC42SE2-209ENST00000506419 RMI2Q96E14 147 aa9.42□□□□□ -0.9
CDC42SE2-209ENST00000506419 DMBT1Q9UGM3 2413 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE2-209ENST00000506419 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
CDC42SE2-209ENST00000506419 VAX2Q9UIW0 290 aa9.41□□□□□ -0.9
CDC42SE2-209ENST00000506419 TRBV20OR9-2A0A075B6H5 130 aa9.4□□□□□ -0.9
CDC42SE2-209ENST00000506419 C15orf54Q8N8G6 183 aa9.4□□□□□ -0.9
CDC42SE2-209ENST00000506419 OR2D3Q8NGH3 330 aa9.4□□□□□ -0.9
CDC42SE2-209ENST00000506419 M0QY20 66 aa9.39□□□□□ -0.91
CDC42SE2-209ENST00000506419 Q0VG73 95 aa9.39□□□□□ -0.91
CDC42SE2-209ENST00000506419 KCNIP4Q6PIL6 250 aa9.39□□□□□ -0.91
CDC42SE2-209ENST00000506419 TCTE3Q8IZS6 198 aa9.39□□□□□ -0.91
CDC42SE2-209ENST00000506419 DAZAP1Q96EP5 407 aaKnown RBP9.39□□□□□ -0.91
CDC42SE2-209ENST00000506419 CHCHD5Q9BSY4 110 aa9.39□□□□□ -0.91
CDC42SE2-209ENST00000506419 TPPP3Q9BW30 176 aa9.39□□□□□ -0.91
CDC42SE2-209ENST00000506419 SMIM17P0DL12 118 aa9.38□□□□□ -0.91
CDC42SE2-209ENST00000506419 MEF2BQ02080 365 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-209ENST00000506419 EIF5AL1Q6IS14 154 aaKnown RBP9.38□□□□□ -0.91
CDC42SE2-209ENST00000506419 FER1L6-AS1Q8NA97 138 aa9.38□□□□□ -0.91
CDC42SE2-209ENST00000506419 MED9Q9NWA0 146 aa9.38□□□□□ -0.91
CDC42SE2-209ENST00000506419 PKHD1L1Q86WI1 4243 aa9.38□□□□□ -0.91
CDC42SE2-209ENST00000506419 ANGP03950 147 aaKnown RBP9.37□□□□□ -0.91
CDC42SE2-209ENST00000506419 GNG4P50150 75 aa9.37□□□□□ -0.91
CDC42SE2-209ENST00000506419 RPS20P60866 119 aaKnown RBP9.37□□□□□ -0.91
CDC42SE2-209ENST00000506419 RBX1P62877 108 aa9.37□□□□□ -0.91
CDC42SE2-209ENST00000506419 GAGE6Q13070 117 aa9.37□□□□□ -0.91
CDC42SE2-209ENST00000506419 SUMO4Q6EEV6 95 aa9.37□□□□□ -0.91
CDC42SE2-209ENST00000506419 KRTAP26-1Q6PEX3 210 aa9.37□□□□□ -0.91
CDC42SE2-209ENST00000506419 LYZL1Q6UWQ5 148 aa9.37□□□□□ -0.91
CDC42SE2-209ENST00000506419 SLC51BQ86UW2 128 aa9.37□□□□□ -0.91
CDC42SE2-209ENST00000506419 AP1S3Q96PC3 154 aa9.37□□□□□ -0.91
CDC42SE2-209ENST00000506419 C1orf43Q9BWL3 253 aa9.37□□□□□ -0.91
CDC42SE2-209ENST00000506419 TEX46H3BTG2 121 aa9.36□□□□□ -0.91
CDC42SE2-209ENST00000506419 PDE6DO43924 150 aa9.36□□□□□ -0.91
CDC42SE2-209ENST00000506419 CACNG7P62955 275 aa9.36□□□□□ -0.91
CDC42SE2-209ENST00000506419 SCXQ7RTU7 201 aa9.36□□□□□ -0.91
CDC42SE2-209ENST00000506419 NUDT10Q8NFP7 164 aa9.36□□□□□ -0.91
CDC42SE2-209ENST00000506419 NUDT11Q96G61 164 aa9.36□□□□□ -0.91
CDC42SE2-209ENST00000506419 PRR34Q9NV39 138 aa9.36□□□□□ -0.91
CDC42SE2-209ENST00000506419 P01737 135 aa9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 MGPP08493 103 aa9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 BCL2P10415 239 aa9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 NTF3P20783 257 aa9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 IQCJQ1A5X6 159 aa9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 TMEM97Q5BJF2 176 aa9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 Q6ZNX1 250 aa9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 LINC00528Q8N1L1 170 aa9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 LINC00269Q8N2A0 174 aa9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 C9orf62Q8N4C0 152 aa9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 SMIM12Q96EX1 92 aa9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 CHAC1Q9BUX1 264 aa9.35□□□□□ -0.91
CDC42SE2-209ENST00000506419 USP17L23D6RBM5 183 aa9.34□□□□□ -0.91
CDC42SE2-209ENST00000506419 F2Z2F3 143 aa9.34□□□□□ -0.91
CDC42SE2-209ENST00000506419 IFNA1P01562 189 aa9.34□□□□□ -0.91
CDC42SE2-209ENST00000506419 CRPP02741 224 aa9.34□□□□□ -0.91
CDC42SE2-209ENST00000506419 NKX2-5P52952 324 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE2-209ENST00000506419 OCC1Q8TAD7 63 aa9.34□□□□□ -0.91
CDC42SE2-209ENST00000506419 CIRBP-AS1Q8TBR5 109 aa9.34□□□□□ -0.91
CDC42SE2-209ENST00000506419 DEFB104AQ8WTQ1 72 aa9.34□□□□□ -0.91
CDC42SE2-209ENST00000506419 TRBV25-1A0A075B6N4 114 aa9.33□□□□□ -0.92
CDC42SE2-209ENST00000506419 K7EN84 100 aa9.33□□□□□ -0.92
CDC42SE2-209ENST00000506419 PRSS1P07477 247 aa9.33□□□□□ -0.92
CDC42SE2-209ENST00000506419 KRTAP10-4P60372 401 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE2-209ENST00000506419 MIAQ16674 131 aa9.33□□□□□ -0.92
CDC42SE2-209ENST00000506419 WDR73Q6P4I2 378 aa9.33□□□□□ -0.92
CDC42SE2-209ENST00000506419 CLPSL2Q6UWE3 100 aa9.33□□□□□ -0.92
CDC42SE2-209ENST00000506419 IGHV1-24A0A0C4DH33 117 aa9.32□□□□□ -0.92
CDC42SE2-209ENST00000506419 PKIAP61925 76 aa9.32□□□□□ -0.92
CDC42SE2-209ENST00000506419 RASL11AQ6T310 242 aa9.32□□□□□ -0.92
CDC42SE2-209ENST00000506419 C20orf203Q8NBC4 194 aa9.32□□□□□ -0.92
CDC42SE2-209ENST00000506419 RNASE7Q9H1E1 156 aaKnown RBP9.32□□□□□ -0.92
CDC42SE2-209ENST00000506419 IGLV4-60A0A075B6I1 120 aa9.31□□□□□ -0.92
CDC42SE2-209ENST00000506419 XKRY2A2RUG3 117 aa9.31□□□□□ -0.92
CDC42SE2-209ENST00000506419 H7C1H1 209 aa9.31□□□□□ -0.92
CDC42SE2-209ENST00000506419 PLA2G1BP04054 148 aaKnown RBP9.31□□□□□ -0.92
CDC42SE2-209ENST00000506419 C14orf177Q52M58 125 aa9.31□□□□□ -0.92
CDC42SE2-209ENST00000506419 GFRA4Q9GZZ7 299 aa9.31□□□□□ -0.92
CDC42SE2-209ENST00000506419 DPH3P1Q9H4G8 78 aa9.31□□□□□ -0.92
CDC42SE2-209ENST00000506419 NIT2Q9NQR4 276 aa9.31□□□□□ -0.92
CDC42SE2-209ENST00000506419 BIN3Q9NQY0 253 aa9.31□□□□□ -0.92
CDC42SE2-209ENST00000506419 HMCN2Q8NDA2 5059 aa9.31□□□□□ -0.92
CDC42SE2-209ENST00000506419 HLA-DQA1P01909 254 aa9.3□□□□□ -0.92
CDC42SE2-209ENST00000506419 CTRLP40313 264 aa9.3□□□□□ -0.92
CDC42SE2-209ENST00000506419 FOXA3P55318 350 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE2-209ENST00000506419 TRGC1P0CF51 173 aa9.29□□□□□ -0.92
CDC42SE2-209ENST00000506419 REG3AQ06141 175 aa9.29□□□□□ -0.92
CDC42SE2-209ENST00000506419 TWIST1Q15672 202 aa9.29□□□□□ -0.92
CDC42SE2-209ENST00000506419 GATD1Q8NB37 220 aa9.29□□□□□ -0.92
CDC42SE2-209ENST00000506419 GTSF1Q8WW33 167 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms