RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 UBE2DNLQ8IWF7 75 aa9.16□□□□□ -0.94
PDLIM7-212ENST00000504380 LINC00476Q8WZB0 136 aa9.16□□□□□ -0.94
PDLIM7-212ENST00000504380 IMMP2LQ96T52 175 aa9.16□□□□□ -0.94
PDLIM7-212ENST00000504380 LINC00588Q9Y4M8 146 aa9.16□□□□□ -0.94
PDLIM7-212ENST00000504380 IGHV3-38A0A0C4DH36 116 aa9.15□□□□□ -0.94
PDLIM7-212ENST00000504380 SMKR1H3BMG3 65 aa9.15□□□□□ -0.94
PDLIM7-212ENST00000504380 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
PDLIM7-212ENST00000504380 KCNIP4Q6PIL6 250 aa9.15□□□□□ -0.94
PDLIM7-212ENST00000504380 LYPD5Q6UWN5 251 aa9.15□□□□□ -0.94
PDLIM7-212ENST00000504380 ATP6V0E2Q8NHE4 81 aa9.15□□□□□ -0.94
PDLIM7-212ENST00000504380 RPL39LQ96EH5 51 aaKnown RBP9.15□□□□□ -0.94
PDLIM7-212ENST00000504380 BTF3L4Q96K17 158 aa9.15□□□□□ -0.94
PDLIM7-212ENST00000504380 TMEM242Q9NWH2 141 aa9.15□□□□□ -0.94
PDLIM7-212ENST00000504380 NCR2O95944 276 aa9.14□□□□□ -0.95
PDLIM7-212ENST00000504380 S100PP25815 95 aa9.14□□□□□ -0.95
PDLIM7-212ENST00000504380 RPL36AP83881 106 aaKnown RBP9.14□□□□□ -0.95
PDLIM7-212ENST00000504380 FAM104BQ5XKR9 115 aa9.14□□□□□ -0.95
PDLIM7-212ENST00000504380 LGALS9CQ6DKI2 356 aa9.14□□□□□ -0.95
PDLIM7-212ENST00000504380 RASL11AQ6T310 242 aa9.14□□□□□ -0.95
PDLIM7-212ENST00000504380 DEFB104AQ8WTQ1 72 aa9.14□□□□□ -0.95
PDLIM7-212ENST00000504380 RPL36ALQ969Q0 106 aaKnown RBP9.14□□□□□ -0.95
PDLIM7-212ENST00000504380 ALMS1Q8TCU4 4167 aa9.14□□□□□ -0.95
PDLIM7-212ENST00000504380 TRBV7-3A0A075B6L6 115 aa9.13□□□□□ -0.95
PDLIM7-212ENST00000504380 TRBV10-1A0A0K0K1A3 114 aa9.13□□□□□ -0.95
PDLIM7-212ENST00000504380 A0A1B0GW15 77 aa9.13□□□□□ -0.95
PDLIM7-212ENST00000504380 CCL18P55774 89 aa9.13□□□□□ -0.95
PDLIM7-212ENST00000504380 UBE2D3P61077 147 aa9.13□□□□□ -0.95
PDLIM7-212ENST00000504380 UBE2D2P62837 147 aa9.13□□□□□ -0.95
PDLIM7-212ENST00000504380 MRPL51Q4U2R6 128 aaKnown RBP9.13□□□□□ -0.95
PDLIM7-212ENST00000504380 ATP5L2Q7Z4Y8 100 aa9.13□□□□□ -0.95
PDLIM7-212ENST00000504380 TGIF2-C20orf24A0A0A6YYL0 155 aa9.12□□□□□ -0.95
PDLIM7-212ENST00000504380 H7C1H1 209 aa9.12□□□□□ -0.95
PDLIM7-212ENST00000504380 S100A8P05109 93 aa9.12□□□□□ -0.95
PDLIM7-212ENST00000504380 RPS10P46783 165 aaKnown RBP9.12□□□□□ -0.95
PDLIM7-212ENST00000504380 NIT2Q9NQR4 276 aa9.12□□□□□ -0.95
PDLIM7-212ENST00000504380 TNFRSF18Q9Y5U5 241 aa9.12□□□□□ -0.95
PDLIM7-212ENST00000504380 TMEM136Q6ZRR5 245 aa9.11□□□□□ -0.95
PDLIM7-212ENST00000504380 CBLN2Q8IUK8 224 aa9.11□□□□□ -0.95
PDLIM7-212ENST00000504380 IGLV2-18A0A075B6J9 118 aa9.1□□□□□ -0.95
PDLIM7-212ENST00000504380 TRAV9-1A0A075B6T8 112 aa9.1□□□□□ -0.95
PDLIM7-212ENST00000504380 ELOBQ15370 118 aa9.1□□□□□ -0.95
PDLIM7-212ENST00000504380 OR10J3Q5JRS4 329 aa9.1□□□□□ -0.95
PDLIM7-212ENST00000504380 SH2D6Q7Z4S9 175 aa9.1□□□□□ -0.95
PDLIM7-212ENST00000504380 MRAP2Q96G30 205 aa9.1□□□□□ -0.95
PDLIM7-212ENST00000504380 DNAJC30Q96LL9 226 aa9.1□□□□□ -0.95
PDLIM7-212ENST00000504380 GTSF1LQ9H1H1 148 aa9.1□□□□□ -0.95
PDLIM7-212ENST00000504380 MRPS16Q9Y3D3 137 aaKnown RBP9.1□□□□□ -0.95
PDLIM7-212ENST00000504380 VPS13DQ5THJ4 4388 aa9.1□□□□□ -0.95
PDLIM7-212ENST00000504380 WFDC10BQ8IUB3 73 aa9.09□□□□□ -0.95
PDLIM7-212ENST00000504380 HERC2O95714 4834 aa9.08□□□□□ -0.96
PDLIM7-212ENST00000504380 D6R8Y8 96 aa9.08□□□□□ -0.96
PDLIM7-212ENST00000504380 M0R2N4 97 aa9.08□□□□□ -0.96
PDLIM7-212ENST00000504380 SCO1O75880 301 aa9.08□□□□□ -0.96
PDLIM7-212ENST00000504380 CKS2P33552 79 aa9.08□□□□□ -0.96
PDLIM7-212ENST00000504380 KIAA1644Q3SXP7 199 aa9.08□□□□□ -0.96
PDLIM7-212ENST00000504380 NTM-AS1Q6ZSK4 140 aa9.08□□□□□ -0.96
PDLIM7-212ENST00000504380 NRACQ8N912 160 aa9.08□□□□□ -0.96
PDLIM7-212ENST00000504380 YPEL4Q96NS1 127 aa9.08□□□□□ -0.96
PDLIM7-212ENST00000504380 NPYP01303 97 aa9.07□□□□□ -0.96
PDLIM7-212ENST00000504380 LELP1Q5T871 98 aa9.07□□□□□ -0.96
PDLIM7-212ENST00000504380 Q9H8V8 135 aa9.07□□□□□ -0.96
PDLIM7-212ENST00000504380 ST20Q9HBF5 79 aa9.07□□□□□ -0.96
PDLIM7-212ENST00000504380 SDHAF1A6NFY7 115 aa9.06□□□□□ -0.96
PDLIM7-212ENST00000504380 TIRAPP58753 221 aa9.06□□□□□ -0.96
PDLIM7-212ENST00000504380 DAZ4Q86SG3 579 aaKnown RBP9.06□□□□□ -0.96
PDLIM7-212ENST00000504380 Q8N3U1 123 aa9.06□□□□□ -0.96
PDLIM7-212ENST00000504380 FRZBQ92765 325 aa9.06□□□□□ -0.96
PDLIM7-212ENST00000504380 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
PDLIM7-212ENST00000504380 DAZ3Q9NR90 486 aaKnown RBP9.06□□□□□ -0.96
PDLIM7-212ENST00000504380 SMCO4Q9NRQ5 59 aa9.06□□□□□ -0.96
PDLIM7-212ENST00000504380 TRBV6-5A0A0K0K1A5 114 aa9.05□□□□□ -0.96
PDLIM7-212ENST00000504380 TNFRSF6BO95407 300 aa9.05□□□□□ -0.96
PDLIM7-212ENST00000504380 APCSP02743 223 aa9.05□□□□□ -0.96
PDLIM7-212ENST00000504380 PMCHP20382 165 aa9.05□□□□□ -0.96
PDLIM7-212ENST00000504380 PRELID3AQ96N28 172 aa9.05□□□□□ -0.96
PDLIM7-212ENST00000504380 TMEM70Q9BUB7 260 aa9.05□□□□□ -0.96
PDLIM7-212ENST00000504380 GNB1LQ9BYB4 327 aa9.05□□□□□ -0.96
PDLIM7-212ENST00000504380 TRBV24-1A0A075B6N3 115 aa9.04□□□□□ -0.96
PDLIM7-212ENST00000504380 TRBV6-8A0A0A6YYG3 113 aa9.04□□□□□ -0.96
PDLIM7-212ENST00000504380 TRAV8-6A0A0B4J262 113 aa9.04□□□□□ -0.96
PDLIM7-212ENST00000504380 SIVA1O15304 175 aa9.04□□□□□ -0.96
PDLIM7-212ENST00000504380 ATP6V1G1O75348 118 aa9.04□□□□□ -0.96
PDLIM7-212ENST00000504380 ORMDL3Q8N138 153 aa9.04□□□□□ -0.96
PDLIM7-212ENST00000504380 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.04□□□□□ -0.96
PDLIM7-212ENST00000504380 MRPL18Q9H0U6 180 aaKnown RBP9.04□□□□□ -0.96
PDLIM7-212ENST00000504380 IGHV3-30P01768 117 aa9.03□□□□□ -0.96
PDLIM7-212ENST00000504380 IGHV3-33P01772 117 aa9.03□□□□□ -0.96
PDLIM7-212ENST00000504380 HLA-DQA1P01909 254 aa9.03□□□□□ -0.96
PDLIM7-212ENST00000504380 IGHV3-30-3P0DP02 117 aa9.03□□□□□ -0.96
PDLIM7-212ENST00000504380 IGHV3-30-5P0DP03 117 aa9.03□□□□□ -0.96
PDLIM7-212ENST00000504380 POLR2KP53803 58 aaKnown RBP9.03□□□□□ -0.96
PDLIM7-212ENST00000504380 SUMO2P61956 95 aaKnown RBP9.03□□□□□ -0.96
PDLIM7-212ENST00000504380 FABP9Q0Z7S8 132 aa9.03□□□□□ -0.96
PDLIM7-212ENST00000504380 PCLOQ9Y6V0 5065 aa9.03□□□□□ -0.96
PDLIM7-212ENST00000504380 LOC389332A0A1B0GUA5 103 aa9.02□□□□□ -0.97
PDLIM7-212ENST00000504380 I3L3M4 83 aa9.02□□□□□ -0.97
PDLIM7-212ENST00000504380 TSHBP01222 138 aa9.02□□□□□ -0.97
PDLIM7-212ENST00000504380 PPBPP02775 128 aa9.02□□□□□ -0.97
PDLIM7-212ENST00000504380 GAGE6Q13070 117 aa9.02□□□□□ -0.97
PDLIM7-212ENST00000504380 COTL1Q14019 142 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms