RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 RABAC1Q9UI14 185 aa2.8□□□□□ -1.96
SCLT1-206ENST00000503565 AMMECR1Q9Y4X0 333 aaPredicted RBP2.8□□□□□ -1.96
SCLT1-206ENST00000503565 CENPEQ02224 2701 aa2.8□□□□□ -1.96
SCLT1-206ENST00000503565 NAV3Q8IVL0 2385 aa2.8□□□□□ -1.96
SCLT1-206ENST00000503565 ZFHX3Q15911 3703 aa2.8□□□□□ -1.96
SCLT1-206ENST00000503565 FREM3P0C091 2139 aa2.8□□□□□ -1.96
SCLT1-206ENST00000503565 ZGRF1Q86YA3 2104 aa2.8□□□□□ -1.96
SCLT1-206ENST00000503565 PRRC2CQ9Y520 2896 aaKnown RBP2.79□□□□□ -1.96
SCLT1-206ENST00000503565 DNAJC13O75165 2243 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 ZNF407Q9C0G0 2248 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 SHANK1Q9Y566 2161 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 IGLV4-60A0A075B6I1 120 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 TRBV19A0A075B6N1 114 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 IGHV3OR16-8A0A075B7F1 116 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 IGHV3-21A0A0B4J1V1 117 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 TRAV13-1A0A0B4J241 112 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 LOC107986453A0A1B0GWG9 222 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 C17orf51A8MQB3 221 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 H3BMG7 143 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 SYS1-DBNDD2H3BUS1 97 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 APOMO95445 188 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 TRACP01848 142 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 TRGV3P03979 118 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 CRYGAP11844 174 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 LINC00315P59091 139 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 WFDC2Q14508 124 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 MSMO1Q15800 293 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 RTL8BQ17RB0 113 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 ETDBQ3ZM63 59 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 Q56UQ5 140 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 KPRPQ5T749 579 aaPredicted RBP2.79□□□□□ -1.96
SCLT1-206ENST00000503565 TRAPPC6BQ86SZ2 158 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 PRR15Q8IV56 129 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 LY6G5BQ8NDX9 201 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 GPX7Q96SL4 187 aaPredicted RBP2.79□□□□□ -1.96
SCLT1-206ENST00000503565 B9D2Q9BPU9 175 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 RTL8AQ9BWD3 113 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 COMMD5Q9GZQ3 224 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 EIF5A2Q9GZV4 153 aaKnown RBP2.79□□□□□ -1.96
SCLT1-206ENST00000503565 AGPAT4-IT1Q9H0P7 198 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 PXMP4Q9Y6I8 212 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 FBN2P35556 2912 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 NCKAP5O14513 1909 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 ARID1AO14497 2285 aa2.79□□□□□ -1.96
SCLT1-206ENST00000503565 CHD3Q12873 2000 aaKnown RBP2.78□□□□□ -1.96
SCLT1-206ENST00000503565 MTORP42345 2549 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 ABCA2Q9BZC7 2435 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 DSPPQ9NZW4 1301 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 IGLV3-32A0A0A0MS00 114 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 LRCOL1A6NCL2 159 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 DPRXA6NFQ7 191 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 A8MWP4 228 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 FXYD1O00168 92 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 GNGT2O14610 69 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 ZNF737O75373 536 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 LTAP01374 205 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 PYYP10082 97 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 PTHLHP12272 177 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 KRTDAPP60985 99 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 SLC22A24Q8N4F4 322 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 LINC00311Q8N616 119 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 SIGLECL1Q8N7X8 197 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 TMEM75Q8N9X5 138 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 WFDC11Q8NEX6 87 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 OR10AC1Q8NH08 325 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 FAM213BQ8TBF2 198 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 PPDPFLQ8WWR9 84 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 SCRT1Q9BWW7 348 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 GABARAPL1Q9H0R8 117 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 ZNF492Q9P255 531 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 POLEQ07864 2286 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 MYO7BQ6PIF6 2116 aa2.78□□□□□ -1.96
SCLT1-206ENST00000503565 SPG11Q96JI7 2443 aa2.78□□□□□ -1.97
SCLT1-206ENST00000503565 SPENQ96T58 3664 aaKnown RBP2.78□□□□□ -1.97
SCLT1-206ENST00000503565 SETD2Q9BYW2 2564 aaPredicted RBP2.77□□□□□ -1.97
SCLT1-206ENST00000503565 MED12Q93074 2177 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 LRBAP50851 2863 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 HEATR5AQ86XA9 2040 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 TRAV12-2A0A075B6T6 113 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 IGKV1OR2-108A0A075B7D4 117 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 TRAV40A0A0B4J280 105 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 RBAKDNA6NC62 111 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 CPSF4LA6NMK7 179 aaKnown RBP2.77□□□□□ -1.97
SCLT1-206ENST00000503565 K7ERS5 55 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 IGKV1D-33P01593 117 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 IGKV1-33P01594 117 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 CBLN1P23435 193 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 INSL3P51460 131 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 NMSQ5H8A3 153 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 EBLN2Q6P2I7 272 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 ZNF322Q6U7Q0 402 aaPredicted RBP2.77□□□□□ -1.97
SCLT1-206ENST00000503565 SCGB1D4Q6XE38 83 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 SPATA12Q7Z6I5 190 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 CNEP1R1Q8N9A8 125 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 OR2T10Q8NGZ9 312 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 NMNAT3Q96T66 252 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 CST11Q9H112 138 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 MANBALQ9NQG1 85 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 CYTL1Q9NRR1 136 aa2.77□□□□□ -1.97
SCLT1-206ENST00000503565 KLK5Q9Y337 293 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms