RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 SAMD5Q5TGI4 173 aa5.37□□□□□ -1.55
CPNE4-202ENST00000502818 LGALS9CQ6DKI2 356 aa5.37□□□□□ -1.55
CPNE4-202ENST00000502818 MRAP2Q96G30 205 aa5.37□□□□□ -1.55
CPNE4-202ENST00000502818 SPAG8Q99932 426 aaPredicted RBP5.37□□□□□ -1.55
CPNE4-202ENST00000502818 C19orf73Q9NVV2 129 aa5.37□□□□□ -1.55
CPNE4-202ENST00000502818 SIGLEC8Q9NYZ4 499 aa5.37□□□□□ -1.55
CPNE4-202ENST00000502818 HLA-DRB4X5D2U9 266 aa5.37□□□□□ -1.55
CPNE4-202ENST00000502818 TRAV21A0A0B4J279 112 aa5.36□□□□□ -1.55
CPNE4-202ENST00000502818 H0Y8G0 127 aa5.36□□□□□ -1.55
CPNE4-202ENST00000502818 SMIM13P0DJ93 91 aa5.36□□□□□ -1.55
CPNE4-202ENST00000502818 GATD1Q8NB37 220 aa5.36□□□□□ -1.55
CPNE4-202ENST00000502818 AP5S1Q9NUS5 200 aa5.36□□□□□ -1.55
CPNE4-202ENST00000502818 TRAV2A0A0B4J234 112 aa5.36□□□□□ -1.55
CPNE4-202ENST00000502818 SMKR1H3BMG3 65 aa5.36□□□□□ -1.55
CPNE4-202ENST00000502818 RNASE3P12724 160 aaKnown RBP5.36□□□□□ -1.55
CPNE4-202ENST00000502818 TWIST1Q15672 202 aa5.36□□□□□ -1.55
CPNE4-202ENST00000502818 AMN1Q8IY45 258 aa5.36□□□□□ -1.55
CPNE4-202ENST00000502818 RAB37Q96AX2 223 aa5.36□□□□□ -1.55
CPNE4-202ENST00000502818 NAA38Q9BRA0 125 aaKnown RBP5.36□□□□□ -1.55
CPNE4-202ENST00000502818 MDFICQ9P1T7 246 aa5.36□□□□□ -1.55
CPNE4-202ENST00000502818 COL6A5A8TX70 2615 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 MUC4Q99102 2169 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 A8MTW9 85 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 F8W1H4 67 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 NCR2O95944 276 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 CRYBA4P53673 196 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 JPT2Q9H910 190 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 TRAV26-1A0A087WT03 109 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 TRAV25A0A0B4J276 109 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 GIG44P09565 113 aaPredicted RBP5.35□□□□□ -1.55
CPNE4-202ENST00000502818 GATA1P15976 413 aaPredicted RBP5.35□□□□□ -1.55
CPNE4-202ENST00000502818 EVI2AP22794 236 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 LEPP41159 167 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 RIGQ13278 110 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 BEAN1Q3B7T3 259 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 RNF185Q96GF1 192 aa5.35□□□□□ -1.55
CPNE4-202ENST00000502818 TRBV7-9A0A0J9YWB2 115 aa5.34□□□□□ -1.55
CPNE4-202ENST00000502818 OR11H12B2RN74 326 aa5.34□□□□□ -1.55
CPNE4-202ENST00000502818 DUSP14O95147 198 aaKnown RBP5.34□□□□□ -1.55
CPNE4-202ENST00000502818 HTN1P15515 57 aa5.34□□□□□ -1.55
CPNE4-202ENST00000502818 Q8N1Y9 231 aa5.34□□□□□ -1.55
CPNE4-202ENST00000502818 OR11H2Q8NH07 326 aa5.34□□□□□ -1.55
CPNE4-202ENST00000502818 ODF3Q96PU9 254 aa5.34□□□□□ -1.55
CPNE4-202ENST00000502818 CNFNQ9BYD5 112 aa5.34□□□□□ -1.55
CPNE4-202ENST00000502818 SPANXB1Q9NS25 103 aaPredicted RBP5.34□□□□□ -1.55
CPNE4-202ENST00000502818 HIGD1BQ9P298 99 aa5.34□□□□□ -1.55
CPNE4-202ENST00000502818 XCL2Q9UBD3 114 aa5.34□□□□□ -1.55
CPNE4-202ENST00000502818 TRAV26-2A0A0B4J265 109 aa5.33□□□□□ -1.56
CPNE4-202ENST00000502818 A0A1B0GW15 77 aa5.33□□□□□ -1.56
CPNE4-202ENST00000502818 M0R381 172 aa5.33□□□□□ -1.56
CPNE4-202ENST00000502818 RPL35AP18077 110 aaKnown RBP5.33□□□□□ -1.56
CPNE4-202ENST00000502818 MRPL51Q4U2R6 128 aaKnown RBP5.33□□□□□ -1.56
CPNE4-202ENST00000502818 ZNF493Q6ZR52 646 aa5.33□□□□□ -1.56
CPNE4-202ENST00000502818 TRPT1Q86TN4 253 aaKnown RBP5.33□□□□□ -1.56
CPNE4-202ENST00000502818 PRSS3P2Q8NHM4 247 aa5.33□□□□□ -1.56
CPNE4-202ENST00000502818 PKD1L1Q8TDX9 2849 aa5.33□□□□□ -1.56
CPNE4-202ENST00000502818 A0A096LNJ9 63 aa5.33□□□□□ -1.56
CPNE4-202ENST00000502818 IGHV3-16A0A0C4DH30 117 aa5.33□□□□□ -1.56
CPNE4-202ENST00000502818 ASIPP42127 132 aa5.33□□□□□ -1.56
CPNE4-202ENST00000502818 FAM104BQ5XKR9 115 aa5.33□□□□□ -1.56
CPNE4-202ENST00000502818 FAM159AQ6UWV7 190 aa5.33□□□□□ -1.56
CPNE4-202ENST00000502818 GEMIN7Q9H840 131 aaKnown RBP5.33□□□□□ -1.56
CPNE4-202ENST00000502818 IGHV1OR15-1A0A075B7D0 117 aa5.32□□□□□ -1.56
CPNE4-202ENST00000502818 D6R8Y8 96 aa5.32□□□□□ -1.56
CPNE4-202ENST00000502818 TSPAN13O95857 204 aa5.32□□□□□ -1.56
CPNE4-202ENST00000502818 S100A4P26447 101 aaKnown RBP5.32□□□□□ -1.56
CPNE4-202ENST00000502818 SPANXN1Q5VSR9 72 aa5.32□□□□□ -1.56
CPNE4-202ENST00000502818 C1orf158Q8N1D5 194 aa5.32□□□□□ -1.56
CPNE4-202ENST00000502818 PHLDA1Q8WV24 401 aaPredicted RBP5.32□□□□□ -1.56
CPNE4-202ENST00000502818 MRPL16Q9NX20 251 aaKnown RBP5.32□□□□□ -1.56
CPNE4-202ENST00000502818 IGHV3OR16-12A0A075B7B8 117 aa5.32□□□□□ -1.56
CPNE4-202ENST00000502818 E9PLD3 99 aa5.32□□□□□ -1.56
CPNE4-202ENST00000502818 CACNG7P62955 275 aa5.32□□□□□ -1.56
CPNE4-202ENST00000502818 PCP2Q8IVA1 136 aa5.32□□□□□ -1.56
CPNE4-202ENST00000502818 STHQ8IWL8 128 aa5.32□□□□□ -1.56
CPNE4-202ENST00000502818 C14orf178Q8N769 122 aaPredicted RBP5.32□□□□□ -1.56
CPNE4-202ENST00000502818 ZNF479Q96JC4 524 aa5.32□□□□□ -1.56
CPNE4-202ENST00000502818 IGHV4-4A0A075B6R2 117 aa5.31□□□□□ -1.56
CPNE4-202ENST00000502818 NPYP01303 97 aa5.31□□□□□ -1.56
CPNE4-202ENST00000502818 FXYD2P54710 66 aa5.31□□□□□ -1.56
CPNE4-202ENST00000502818 WFDC2Q14508 124 aa5.31□□□□□ -1.56
CPNE4-202ENST00000502818 C9orf85Q96MD7 179 aa5.31□□□□□ -1.56
CPNE4-202ENST00000502818 TM2D2Q9BX73 214 aa5.31□□□□□ -1.56
CPNE4-202ENST00000502818 U3KQK5 164 aa5.31□□□□□ -1.56
CPNE4-202ENST00000502818 NBEAL2Q6ZNJ1 2754 aa5.31□□□□□ -1.56
CPNE4-202ENST00000502818 A0A087WWL8 130 aa5.3□□□□□ -1.56
CPNE4-202ENST00000502818 LOC389332A0A1B0GUA5 103 aa5.3□□□□□ -1.56
CPNE4-202ENST00000502818 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.3□□□□□ -1.56
CPNE4-202ENST00000502818 HBDP02042 147 aa5.3□□□□□ -1.56
CPNE4-202ENST00000502818 GCSHP23434 173 aa5.3□□□□□ -1.56
CPNE4-202ENST00000502818 IFI27P40305 119 aaPredicted RBP5.3□□□□□ -1.56
CPNE4-202ENST00000502818 NMUP48645 174 aa5.3□□□□□ -1.56
CPNE4-202ENST00000502818 OXLD1Q5BKU9 147 aa5.3□□□□□ -1.56
CPNE4-202ENST00000502818 WFDC9Q8NEX5 89 aa5.3□□□□□ -1.56
CPNE4-202ENST00000502818 C18orf15Q96N68 181 aa5.3□□□□□ -1.56
CPNE4-202ENST00000502818 PHLDA3Q9Y5J5 127 aa5.3□□□□□ -1.56
CPNE4-202ENST00000502818 ANK2Q01484 3957 aa5.3□□□□□ -1.56
CPNE4-202ENST00000502818 LINC00315P59091 139 aa5.3□□□□□ -1.56
CPNE4-202ENST00000502818 DEFB104AQ8WTQ1 72 aa5.3□□□□□ -1.56
CPNE4-202ENST00000502818 IFI27L1Q96BM0 104 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms