RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 VPS25Q9BRG1 176 aa7.26□□□□□ -1.25
CLIP1-204ENST00000501271 MYO9AB2RTY4 2548 aa7.26□□□□□ -1.25
CLIP1-204ENST00000501271 LINC01549A6NIU2 74 aa7.26□□□□□ -1.25
CLIP1-204ENST00000501271 Q5PR19 223 aa7.26□□□□□ -1.25
CLIP1-204ENST00000501271 TRPT1Q86TN4 253 aaKnown RBP7.26□□□□□ -1.25
CLIP1-204ENST00000501271 ZNRF2Q8NHG8 242 aa7.26□□□□□ -1.25
CLIP1-204ENST00000501271 ZNF479Q96JC4 524 aa7.26□□□□□ -1.25
CLIP1-204ENST00000501271 NACAE9PAV3 2078 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 DEFB131AP59861 70 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 SCGB2A2Q13296 93 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 NSUN5P1Q3KNT7 163 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 DUX3Q96PT4 197 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 OPRPNQ99935 248 aaPredicted RBP7.25□□□□□ -1.25
CLIP1-204ENST00000501271 NBPF19A0A087WUL8 3843 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 TRGV11A0A075B6L2 103 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 A0A1B0GWB2 263 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 RBMY1BA6NDE4 496 aaKnown RBP7.25□□□□□ -1.25
CLIP1-204ENST00000501271 RBMY1EA6NEQ0 496 aaKnown RBP7.25□□□□□ -1.25
CLIP1-204ENST00000501271 RBMY1DP0C7P1 496 aaKnown RBP7.25□□□□□ -1.25
CLIP1-204ENST00000501271 P0DMU3 169 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 FAM231AP0DMU4 169 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 FAM231CP0DMU5 169 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 HTN1P15515 57 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 TSPEAR-AS2P59090 65 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 HIST2H2BDQ6DRA6 164 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 SCGB1D4Q6XE38 83 aa7.25□□□□□ -1.25
CLIP1-204ENST00000501271 PRM2P04554 102 aa7.24□□□□□ -1.25
CLIP1-204ENST00000501271 PAPPA-AS1Q5QFB9 102 aa7.24□□□□□ -1.25
CLIP1-204ENST00000501271 APCP25054 2843 aa7.24□□□□□ -1.25
CLIP1-204ENST00000501271 HERVK_113P61574 105 aa7.23□□□□□ -1.25
CLIP1-204ENST00000501271 RHOHQ15669 191 aa7.23□□□□□ -1.25
CLIP1-204ENST00000501271 DEFB113Q30KQ7 82 aa7.23□□□□□ -1.25
CLIP1-204ENST00000501271 TMEM170BQ5T4T1 132 aa7.23□□□□□ -1.25
CLIP1-204ENST00000501271 TMEM61Q8N0U2 210 aa7.23□□□□□ -1.25
CLIP1-204ENST00000501271 Q8N2B8 174 aa7.23□□□□□ -1.25
CLIP1-204ENST00000501271 ZNF843Q8N446 348 aa7.23□□□□□ -1.25
CLIP1-204ENST00000501271 TLN2Q9Y4G6 2542 aa7.23□□□□□ -1.25
CLIP1-204ENST00000501271 IGHV3-73A0A0B4J1V6 119 aa7.23□□□□□ -1.25
CLIP1-204ENST00000501271 H3BMM0 161 aa7.23□□□□□ -1.25
CLIP1-204ENST00000501271 RRN3P1Q2M238 152 aa7.23□□□□□ -1.25
CLIP1-204ENST00000501271 A8MTW9 85 aa7.22□□□□□ -1.25
CLIP1-204ENST00000501271 PROK1P58294 105 aa7.22□□□□□ -1.25
CLIP1-204ENST00000501271 C20orf203Q8NBC4 194 aa7.22□□□□□ -1.25
CLIP1-204ENST00000501271 Q96MF0 132 aa7.22□□□□□ -1.25
CLIP1-204ENST00000501271 KRTAP3-3Q9BYR6 98 aa7.22□□□□□ -1.25
CLIP1-204ENST00000501271 KRTAP3-2Q9BYR7 98 aa7.22□□□□□ -1.25
CLIP1-204ENST00000501271 A0A0J9YY99 117 aa7.22□□□□□ -1.25
CLIP1-204ENST00000501271 G3V4G9 280 aa7.22□□□□□ -1.25
CLIP1-204ENST00000501271 I3L3M4 83 aa7.22□□□□□ -1.25
CLIP1-204ENST00000501271 KHDC1LQ5JSQ8 128 aa7.22□□□□□ -1.25
CLIP1-204ENST00000501271 CUBNO60494 3623 aa7.22□□□□□ -1.25
CLIP1-204ENST00000501271 PF4P02776 101 aa7.21□□□□□ -1.25
CLIP1-204ENST00000501271 SRSF9Q13242 221 aaKnown RBP eCLIP7.21□□□□□ -1.25
CLIP1-204ENST00000501271 KRTAP1-3Q8IUG1 177 aa7.21□□□□□ -1.25
CLIP1-204ENST00000501271 C4orf3Q8WVX3 66 aa7.21□□□□□ -1.25
CLIP1-204ENST00000501271 CHD6Q8TD26 2715 aa7.21□□□□□ -1.26
CLIP1-204ENST00000501271 H3BMG7 143 aa7.21□□□□□ -1.26
CLIP1-204ENST00000501271 NFE4Q86UQ8 179 aa7.21□□□□□ -1.26
CLIP1-204ENST00000501271 DLX4Q92988 240 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-204ENST00000501271 AMELXQ99217 191 aa7.21□□□□□ -1.26
CLIP1-204ENST00000501271 ITPR3Q14573 2671 aa7.21□□□□□ -1.26
CLIP1-204ENST00000501271 EPG5Q9HCE0 2579 aa7.2□□□□□ -1.26
CLIP1-204ENST00000501271 IGLV4-3A0A075B6K6 122 aa7.2□□□□□ -1.26
CLIP1-204ENST00000501271 UBE2D1P51668 147 aa7.2□□□□□ -1.26
CLIP1-204ENST00000501271 MAP6D1Q9H9H5 199 aa7.2□□□□□ -1.26
CLIP1-204ENST00000501271 PGPEP1Q9NXJ5 209 aa7.2□□□□□ -1.26
CLIP1-204ENST00000501271 PEMTQ9UBM1 199 aa7.2□□□□□ -1.26
CLIP1-204ENST00000501271 SONP18583 2426 aaKnown RBP7.2□□□□□ -1.26
CLIP1-204ENST00000501271 TEX48A0A1B0GUV7 120 aa7.2□□□□□ -1.26
CLIP1-204ENST00000501271 LRRC75A-AS1Q8N1F1 130 aa7.2□□□□□ -1.26
CLIP1-204ENST00000501271 SPAG8Q99932 426 aaPredicted RBP7.2□□□□□ -1.26
CLIP1-204ENST00000501271 EDA2RQ9HAV5 297 aa7.2□□□□□ -1.26
CLIP1-204ENST00000501271 Q9UF83 564 aa7.2□□□□□ -1.26
CLIP1-204ENST00000501271 NF1P21359 2839 aa7.2□□□□□ -1.26
CLIP1-204ENST00000501271 TRAV2A0A0B4J234 112 aa7.19□□□□□ -1.26
CLIP1-204ENST00000501271 J3QQQ9 107 aa7.19□□□□□ -1.26
CLIP1-204ENST00000501271 RPL24P83731 157 aaKnown RBP7.19□□□□□ -1.26
CLIP1-204ENST00000501271 WFDC2Q14508 124 aa7.19□□□□□ -1.26
CLIP1-204ENST00000501271 MTURNQ8N3F0 131 aa7.19□□□□□ -1.26
CLIP1-204ENST00000501271 TMEM223A0PJW6 202 aa7.19□□□□□ -1.26
CLIP1-204ENST00000501271 ZNF22P17026 224 aaPredicted RBP7.19□□□□□ -1.26
CLIP1-204ENST00000501271 Q6ZSN1 163 aa7.19□□□□□ -1.26
CLIP1-204ENST00000501271 DYNLRB2Q8TF09 96 aa7.19□□□□□ -1.26
CLIP1-204ENST00000501271 FAM104AQ969W3 186 aa7.19□□□□□ -1.26
CLIP1-204ENST00000501271 MRPL16Q9NX20 251 aaKnown RBP7.19□□□□□ -1.26
CLIP1-204ENST00000501271 A0A0J9YXV3 536 aa7.18□□□□□ -1.26
CLIP1-204ENST00000501271 F8W1H4 67 aa7.18□□□□□ -1.26
CLIP1-204ENST00000501271 M0R2P5 195 aa7.18□□□□□ -1.26
CLIP1-204ENST00000501271 IGHV3-30P01768 117 aa7.18□□□□□ -1.26
CLIP1-204ENST00000501271 IGHV3-30-5P0DP03 117 aa7.18□□□□□ -1.26
CLIP1-204ENST00000501271 SLC25A29Q8N8R3 303 aa7.18□□□□□ -1.26
CLIP1-204ENST00000501271 SPANXB1Q9NS25 103 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-204ENST00000501271 WNK1Q9H4A3 2382 aa7.18□□□□□ -1.26
CLIP1-204ENST00000501271 IGHV3-64A0A075B6Q5 118 aa7.18□□□□□ -1.26
CLIP1-204ENST00000501271 RHODO00212 210 aa7.18□□□□□ -1.26
CLIP1-204ENST00000501271 APOMO95445 188 aa7.18□□□□□ -1.26
CLIP1-204ENST00000501271 TSPAN13O95857 204 aa7.18□□□□□ -1.26
CLIP1-204ENST00000501271 CD28P10747 220 aa7.18□□□□□ -1.26
CLIP1-204ENST00000501271 LGALS3P17931 250 aaKnown RBP7.18□□□□□ -1.26
CLIP1-204ENST00000501271 ZNF415Q09FC8 603 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms