RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 MYCBP2O75592 4640 aa7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 SRRM2Q9UQ35 2752 aaKnown RBP7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 TRAV8-3A0A0A6YYJ7 113 aa7.23□□□□□ -1.25
SHROOM3-210ENST00000497440 MUC21A0A0G2JKD1 596 aa7.23□□□□□ -1.25
SHROOM3-210ENST00000497440 MUC21A0A140T8X8 626 aa7.23□□□□□ -1.25
SHROOM3-210ENST00000497440 P01737 135 aa7.23□□□□□ -1.25
SHROOM3-210ENST00000497440 IGHV3-30P01768 117 aa7.23□□□□□ -1.25
SHROOM3-210ENST00000497440 IGHV3-33P01772 117 aa7.23□□□□□ -1.25
SHROOM3-210ENST00000497440 IGHV3-30-3P0DP02 117 aa7.23□□□□□ -1.25
SHROOM3-210ENST00000497440 IGHV3-30-5P0DP03 117 aa7.23□□□□□ -1.25
SHROOM3-210ENST00000497440 DAZAP1Q96EP5 407 aaKnown RBP7.23□□□□□ -1.25
SHROOM3-210ENST00000497440 HERC1Q15751 4861 aa7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 XKRY2A2RUG3 117 aa7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 EREGO14944 169 aa7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 NTF3P20783 257 aa7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 KRTAP10-1P60331 282 aa7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 LYZL1Q6UWQ5 148 aa7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 Q8N1X5 172 aa7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 NTN5Q8WTR8 489 aaPredicted RBP7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 GTSF1Q8WW33 167 aa7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 DNAJC30Q96LL9 226 aa7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 FAM210AQ96ND0 272 aa7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 AP1S3Q96PC3 154 aa7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 TM2D2Q9BX73 214 aa7.22□□□□□ -1.25
SHROOM3-210ENST00000497440 NKX2-5P52952 324 aaPredicted RBP7.21□□□□□ -1.26
SHROOM3-210ENST00000497440 CT83Q5H943 113 aa7.21□□□□□ -1.26
SHROOM3-210ENST00000497440 TOR2AQ5JU69 321 aa7.21□□□□□ -1.26
SHROOM3-210ENST00000497440 Q8N814 137 aa7.21□□□□□ -1.26
SHROOM3-210ENST00000497440 FRZBQ92765 325 aa7.21□□□□□ -1.26
SHROOM3-210ENST00000497440 FUSP35637 526 aaKnown RBP eCLIP7.2□□□□□ -1.26
SHROOM3-210ENST00000497440 WFDC2Q14508 124 aa7.2□□□□□ -1.26
SHROOM3-210ENST00000497440 ZNF56Q15929 161 aa7.2□□□□□ -1.26
SHROOM3-210ENST00000497440 IQCJQ1A5X6 159 aa7.2□□□□□ -1.26
SHROOM3-210ENST00000497440 TMEM97Q5BJF2 176 aa7.2□□□□□ -1.26
SHROOM3-210ENST00000497440 SUMO4Q6EEV6 95 aa7.2□□□□□ -1.26
SHROOM3-210ENST00000497440 RNASE7Q9H1E1 156 aaKnown RBP7.2□□□□□ -1.26
SHROOM3-210ENST00000497440 RPP21Q9H633 154 aaKnown RBP7.2□□□□□ -1.26
SHROOM3-210ENST00000497440 PRR34Q9NV39 138 aa7.2□□□□□ -1.26
SHROOM3-210ENST00000497440 COX11Q9Y6N1 276 aa7.2□□□□□ -1.26
SHROOM3-210ENST00000497440 SRP19P09132 144 aaKnown RBP7.19□□□□□ -1.26
SHROOM3-210ENST00000497440 KRTAP26-1Q6PEX3 210 aa7.19□□□□□ -1.26
SHROOM3-210ENST00000497440 ENHOQ6UWT2 76 aa7.19□□□□□ -1.26
SHROOM3-210ENST00000497440 PGLYRP4Q96LB8 373 aa7.19□□□□□ -1.26
SHROOM3-210ENST00000497440 FAM231BA6NCW3 169 aa7.18□□□□□ -1.26
SHROOM3-210ENST00000497440 TRGC1P0CF51 173 aa7.18□□□□□ -1.26
SHROOM3-210ENST00000497440 SMIM17P0DL12 118 aa7.18□□□□□ -1.26
SHROOM3-210ENST00000497440 GCSHP23434 173 aa7.18□□□□□ -1.26
SHROOM3-210ENST00000497440 ELOBQ15370 118 aa7.18□□□□□ -1.26
SHROOM3-210ENST00000497440 RASL11AQ6T310 242 aa7.18□□□□□ -1.26
SHROOM3-210ENST00000497440 LINC01551Q86U37 167 aa7.18□□□□□ -1.26
SHROOM3-210ENST00000497440 DPH3P1Q9H4G8 78 aa7.18□□□□□ -1.26
SHROOM3-210ENST00000497440 Q9HAA7 133 aa7.18□□□□□ -1.26
SHROOM3-210ENST00000497440 NIT2Q9NQR4 276 aa7.18□□□□□ -1.26
SHROOM3-210ENST00000497440 A0A087WX48 190 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 A0A1B0GUV1 79 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 F5H697 171 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 H7C1H1 209 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 PSCAO43653 123 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 PKIAP61925 76 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 Q0VG73 95 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 MPV17L2Q567V2 206 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 TEX261Q6UWH6 196 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 Q6ZSA8 131 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 TMEM70Q9BUB7 260 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 GFRA4Q9GZZ7 299 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 SMDT1Q9H4I9 107 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 OSTCQ9NRP0 149 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 KLK12Q9UKR0 248 aa7.17□□□□□ -1.26
SHROOM3-210ENST00000497440 A8MWL6 223 aa7.16□□□□□ -1.26
SHROOM3-210ENST00000497440 C9JQL5 133 aa7.16□□□□□ -1.26
SHROOM3-210ENST00000497440 SSTP61278 116 aa7.16□□□□□ -1.26
SHROOM3-210ENST00000497440 GATD1Q8NB37 220 aa7.16□□□□□ -1.26
SHROOM3-210ENST00000497440 TPPP3Q9BW30 176 aa7.16□□□□□ -1.26
SHROOM3-210ENST00000497440 LCE2BO14633 110 aa7.15□□□□□ -1.26
SHROOM3-210ENST00000497440 GATCO43716 136 aaKnown RBP7.15□□□□□ -1.26
SHROOM3-210ENST00000497440 RBX1P62877 108 aa7.15□□□□□ -1.26
SHROOM3-210ENST00000497440 TWIST1Q15672 202 aa7.15□□□□□ -1.26
SHROOM3-210ENST00000497440 FAM74A3Q4VXF1 159 aa7.15□□□□□ -1.26
SHROOM3-210ENST00000497440 UBE2WQ96B02 151 aa7.15□□□□□ -1.26
SHROOM3-210ENST00000497440 RMI2Q96E14 147 aa7.15□□□□□ -1.26
SHROOM3-210ENST00000497440 SMIM7Q9BQ49 75 aa7.15□□□□□ -1.26
SHROOM3-210ENST00000497440 EIF5A2Q9GZV4 153 aaKnown RBP7.15□□□□□ -1.26
SHROOM3-210ENST00000497440 URGCP-MRPS24S4R325 110 aa7.15□□□□□ -1.26
SHROOM3-210ENST00000497440 TRBV25-1A0A075B6N4 114 aa7.14□□□□□ -1.27
SHROOM3-210ENST00000497440 IGLV5-52A0A0A0MRZ9 124 aa7.14□□□□□ -1.27
SHROOM3-210ENST00000497440 TRBV6-5A0A0K0K1A5 114 aa7.14□□□□□ -1.27
SHROOM3-210ENST00000497440 MIAQ16674 131 aa7.14□□□□□ -1.27
SHROOM3-210ENST00000497440 Q8N976 141 aa7.14□□□□□ -1.27
SHROOM3-210ENST00000497440 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.14□□□□□ -1.27
SHROOM3-210ENST00000497440 C20orf203Q8NBC4 194 aa7.14□□□□□ -1.27
SHROOM3-210ENST00000497440 TSKUQ8WUA8 353 aa7.14□□□□□ -1.27
SHROOM3-210ENST00000497440 BAALCQ8WXS3 180 aa7.14□□□□□ -1.27
SHROOM3-210ENST00000497440 FAM30AQ9NZY2 134 aa7.14□□□□□ -1.27
SHROOM3-210ENST00000497440 V9GYV3 84 aa7.14□□□□□ -1.27
SHROOM3-210ENST00000497440 IGHV1-24A0A0C4DH33 117 aa7.13□□□□□ -1.27
SHROOM3-210ENST00000497440 ZNF727A8MUV8 499 aa7.13□□□□□ -1.27
SHROOM3-210ENST00000497440 TMEM262E9PQX1 116 aa7.13□□□□□ -1.27
SHROOM3-210ENST00000497440 SRSF3P84103 164 aaKnown RBP7.13□□□□□ -1.27
SHROOM3-210ENST00000497440 ISOC2Q96AB3 205 aa7.13□□□□□ -1.27
SHROOM3-210ENST00000497440 CHCHD5Q9BSY4 110 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms