RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 BRS3P32247 399 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 MAP1BP46821 2468 aaKnown RBP2.2□□□□□ -2.06
SNX13-211ENST00000496855 NCOA2Q15596 1464 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 C9orf153Q5TBE3 101 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 Q6ZRN7 208 aaPredicted RBP2.2□□□□□ -2.06
SNX13-211ENST00000496855 PATE1Q8WXA2 126 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 NWD2Q9ULI1 1742 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 HECTD1Q9ULT8 2610 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 ACACBO00763 2458 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 FMN2Q9NZ56 1722 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 NLRP1Q9C000 1473 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 TRBV6-8A0A0A6YYG3 113 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 APOC4-APOC2K7ER74 178 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 APOC2P02655 101 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 IL5P05113 134 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 S100A10P60903 97 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 C2orf82Q6UX34 121 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 DYNLRB2Q8TF09 96 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 TSKUQ8WUA8 353 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 NDUFA12Q9UI09 145 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 FN1P02751 2386 aaKnown RBP2.19□□□□□ -2.06
SNX13-211ENST00000496855 PAPPA2Q9BXP8 1791 aa2.19□□□□□ -2.06
SNX13-211ENST00000496855 IQGAP2Q13576 1575 aa2.19□□□□□ -2.06
SNX13-211ENST00000496855 TRAV14DV4A0A0A6YYC5 116 aa2.19□□□□□ -2.06
SNX13-211ENST00000496855 CCL16O15467 120 aa2.19□□□□□ -2.06
SNX13-211ENST00000496855 IGKCP01834 107 aa2.19□□□□□ -2.06
SNX13-211ENST00000496855 IFITM1P13164 125 aa2.19□□□□□ -2.06
SNX13-211ENST00000496855 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
SNX13-211ENST00000496855 CSAG1Q6PB30 78 aa2.19□□□□□ -2.06
SNX13-211ENST00000496855 Q8N8P6 123 aa2.19□□□□□ -2.06
SNX13-211ENST00000496855 LINC00052Q96N35 136 aa2.19□□□□□ -2.06
SNX13-211ENST00000496855 UBR1Q8IWV7 1749 aa2.19□□□□□ -2.06
SNX13-211ENST00000496855 KIAA1549LQ6ZVL6 1849 aa2.18□□□□□ -2.06
SNX13-211ENST00000496855 FREM1Q5H8C1 2179 aa2.18□□□□□ -2.06
SNX13-211ENST00000496855 INSL4Q14641 139 aa2.18□□□□□ -2.06
SNX13-211ENST00000496855 MED12LQ86YW9 2145 aa2.18□□□□□ -2.06
SNX13-211ENST00000496855 COPS9Q8WXC6 57 aa2.18□□□□□ -2.06
SNX13-211ENST00000496855 SPTSSAQ969W0 71 aa2.18□□□□□ -2.06
SNX13-211ENST00000496855 CFAP46Q8IYW2 2715 aa2.18□□□□□ -2.06
SNX13-211ENST00000496855 CEP192Q8TEP8 1941 aa2.18□□□□□ -2.06
SNX13-211ENST00000496855 UNC13CQ8NB66 2214 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 GOLGA3Q08378 1498 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 RBBP6Q7Z6E9 1792 aaKnown RBP2.17□□□□□ -2.06
SNX13-211ENST00000496855 LAMC1P11047 1609 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 A0A1W2PRS3 328 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 NDUFB6O95139 128 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 SLC25A6P12236 298 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 KRTAP12-4P60329 112 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 C15orf53Q8NAA6 179 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 TXNDC17Q9BRA2 123 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 LIMD2Q9BT23 127 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 SBF2Q86WG5 1849 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 NRXN1Q9ULB1 1477 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 NRAPQ86VF7 1730 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 ICE1Q9Y2F5 2266 aa2.17□□□□□ -2.06
SNX13-211ENST00000496855 RTTNQ86VV8 2226 aa2.16□□□□□ -2.06
SNX13-211ENST00000496855 KTN1Q86UP2 1357 aaKnown RBP2.16□□□□□ -2.06
SNX13-211ENST00000496855 ANK1P16157 1881 aa2.16□□□□□ -2.06
SNX13-211ENST00000496855 CDH23Q9H251 3354 aa2.16□□□□□ -2.06
SNX13-211ENST00000496855 TRAV17A0A0B4J275 112 aa2.16□□□□□ -2.06
SNX13-211ENST00000496855 IGHV3-33P01772 117 aa2.16□□□□□ -2.06
SNX13-211ENST00000496855 S100A7L2Q5SY68 101 aa2.16□□□□□ -2.06
SNX13-211ENST00000496855 TTC9CQ8N5M4 171 aa2.16□□□□□ -2.06
SNX13-211ENST00000496855 PRO3102Q9H379 93 aa2.16□□□□□ -2.06
SNX13-211ENST00000496855 NCOR2Q9Y618 2525 aa2.16□□□□□ -2.06
SNX13-211ENST00000496855 HELZ2Q9BYK8 2649 aaKnown RBP2.16□□□□□ -2.06
SNX13-211ENST00000496855 FRYQ5TBA9 3013 aa2.16□□□□□ -2.06
SNX13-211ENST00000496855 ZFYVE26Q68DK2 2539 aa2.16□□□□□ -2.06
SNX13-211ENST00000496855 LMTK2Q8IWU2 1503 aa2.15□□□□□ -2.06
SNX13-211ENST00000496855 CXorf51AA0A1B0GTR3 108 aa2.15□□□□□ -2.06
SNX13-211ENST00000496855 F8W1H4 67 aa2.15□□□□□ -2.06
SNX13-211ENST00000496855 GYPBP06028 91 aa2.15□□□□□ -2.06
SNX13-211ENST00000496855 IL7P13232 177 aa2.15□□□□□ -2.06
SNX13-211ENST00000496855 C10orf55Q5SWW7 151 aa2.15□□□□□ -2.06
SNX13-211ENST00000496855 OR10AG1Q8NH19 301 aa2.15□□□□□ -2.06
SNX13-211ENST00000496855 ZNF431Q8TF32 576 aaPredicted RBP2.15□□□□□ -2.06
SNX13-211ENST00000496855 MLH3Q9UHC1 1453 aa2.15□□□□□ -2.06
SNX13-211ENST00000496855 TEX15Q9BXT5 2789 aa2.15□□□□□ -2.07
SNX13-211ENST00000496855 QSER1Q2KHR3 1735 aa2.15□□□□□ -2.07
SNX13-211ENST00000496855 SLIT1O75093 1534 aa2.15□□□□□ -2.07
SNX13-211ENST00000496855 DMXL1Q9Y485 3027 aa2.15□□□□□ -2.07
SNX13-211ENST00000496855 MDC1Q14676 2089 aaKnown RBP2.15□□□□□ -2.07
SNX13-211ENST00000496855 DNAH14Q0VDD8 3507 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 KIAA0100Q14667 2235 aaKnown RBP2.14□□□□□ -2.07
SNX13-211ENST00000496855 SNCGO76070 127 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 COX7CP15954 63 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 UBE2G1P62253 170 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 SVBPQ8N300 66 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 PTPN23Q9H3S7 1636 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 EEA1Q15075 1411 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 MUC22E2RYF6 1773 aaPredicted RBP2.14□□□□□ -2.07
SNX13-211ENST00000496855 PTPRFP10586 1907 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 MYOFQ9NZM1 2061 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 PEAK1Q9H792 1746 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 FBN2P35556 2912 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 CR1P17927 2039 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 CELSR3Q9NYQ7 3312 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 PIEZO2Q9H5I5 2752 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 PAPPAQ13219 1627 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 NINQ8N4C6 2090 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms