RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 ZNF727A8MUV8 499 aa10.8□□□□□ -0.68
DNMT3A-215ENST00000496570 GATCO43716 136 aaKnown RBP10.8□□□□□ -0.68
DNMT3A-215ENST00000496570 SMIM17P0DL12 118 aa10.8□□□□□ -0.68
DNMT3A-215ENST00000496570 SUMO4Q6EEV6 95 aa10.8□□□□□ -0.68
DNMT3A-215ENST00000496570 NIT1Q86X76 327 aa10.8□□□□□ -0.68
DNMT3A-215ENST00000496570 MGPP08493 103 aa10.79□□□□□ -0.68
DNMT3A-215ENST00000496570 CT83Q5H943 113 aa10.79□□□□□ -0.68
DNMT3A-215ENST00000496570 NTM-AS1Q6ZSK4 140 aa10.79□□□□□ -0.68
DNMT3A-215ENST00000496570 DAZ4Q86SG3 579 aaKnown RBP10.79□□□□□ -0.68
DNMT3A-215ENST00000496570 DAZ3Q9NR90 486 aaKnown RBP10.79□□□□□ -0.68
DNMT3A-215ENST00000496570 APOBP04114 4563 aaKnown RBP10.79□□□□□ -0.68
DNMT3A-215ENST00000496570 A0A087WTM6 91 aa10.78□□□□□ -0.68
DNMT3A-215ENST00000496570 TRGC1P0CF51 173 aa10.78□□□□□ -0.68
DNMT3A-215ENST00000496570 FOXA3P55318 350 aaPredicted RBP10.78□□□□□ -0.68
DNMT3A-215ENST00000496570 ERVFC1-1P60608 527 aa10.78□□□□□ -0.68
DNMT3A-215ENST00000496570 DPH3P1Q9H4G8 78 aa10.78□□□□□ -0.68
DNMT3A-215ENST00000496570 TRBV6-8A0A0A6YYG3 113 aa10.77□□□□□ -0.69
DNMT3A-215ENST00000496570 C16orf90A8MZG2 172 aa10.77□□□□□ -0.69
DNMT3A-215ENST00000496570 LAGE3Q14657 143 aa10.77□□□□□ -0.69
DNMT3A-215ENST00000496570 TWIST1Q15672 202 aa10.77□□□□□ -0.69
DNMT3A-215ENST00000496570 OSTCQ9NRP0 149 aa10.77□□□□□ -0.69
DNMT3A-215ENST00000496570 HSPG2P98160 4391 aa10.77□□□□□ -0.69
DNMT3A-215ENST00000496570 LRCOL1A6NCL2 159 aa10.76□□□□□ -0.69
DNMT3A-215ENST00000496570 A8MWL6 223 aa10.76□□□□□ -0.69
DNMT3A-215ENST00000496570 FUSP35637 526 aaKnown RBP eCLIP10.76□□□□□ -0.69
DNMT3A-215ENST00000496570 RPL23P62829 140 aaKnown RBP10.76□□□□□ -0.69
DNMT3A-215ENST00000496570 ISOC2Q96AB3 205 aa10.76□□□□□ -0.69
DNMT3A-215ENST00000496570 PGLYRP4Q96LB8 373 aa10.76□□□□□ -0.69
DNMT3A-215ENST00000496570 DNAJC30Q96LL9 226 aa10.76□□□□□ -0.69
DNMT3A-215ENST00000496570 Q9HAA7 133 aa10.76□□□□□ -0.69
DNMT3A-215ENST00000496570 TMEM241Q24JQ0 296 aa10.75□□□□□ -0.69
DNMT3A-215ENST00000496570 FAM74A3Q4VXF1 159 aa10.75□□□□□ -0.69
DNMT3A-215ENST00000496570 V9GYV3 84 aa10.75□□□□□ -0.69
DNMT3A-215ENST00000496570 PEA15Q15121 130 aa10.74□□□□□ -0.69
DNMT3A-215ENST00000496570 RASL11AQ6T310 242 aa10.74□□□□□ -0.69
DNMT3A-215ENST00000496570 TSKUQ8WUA8 353 aa10.74□□□□□ -0.69
DNMT3A-215ENST00000496570 KRTAP17-1Q9BYP8 105 aa10.74□□□□□ -0.69
DNMT3A-215ENST00000496570 SMDT1Q9H4I9 107 aa10.74□□□□□ -0.69
DNMT3A-215ENST00000496570 TRAV26-2A0A0B4J265 109 aa10.73□□□□□ -0.69
DNMT3A-215ENST00000496570 H7C1H1 209 aa10.73□□□□□ -0.69
DNMT3A-215ENST00000496570 GATD1Q8NB37 220 aa10.73□□□□□ -0.69
DNMT3A-215ENST00000496570 CHCHD7Q9BUK0 85 aa10.73□□□□□ -0.69
DNMT3A-215ENST00000496570 GFRA4Q9GZZ7 299 aa10.73□□□□□ -0.69
DNMT3A-215ENST00000496570 FAM231BA6NCW3 169 aa10.72□□□□□ -0.69
DNMT3A-215ENST00000496570 HIGD1CA8MV81 97 aa10.72□□□□□ -0.69
DNMT3A-215ENST00000496570 MPV17L2Q567V2 206 aa10.72□□□□□ -0.69
DNMT3A-215ENST00000496570 MAPKAPK5-AS1Q8N8E1 139 aa10.72□□□□□ -0.69
DNMT3A-215ENST00000496570 NIT2Q9NQR4 276 aa10.72□□□□□ -0.69
DNMT3A-215ENST00000496570 NAT8Q9UHE5 227 aa10.72□□□□□ -0.69
DNMT3A-215ENST00000496570 KLK12Q9UKR0 248 aa10.72□□□□□ -0.69
DNMT3A-215ENST00000496570 WFDC2Q14508 124 aa10.71□□□□□ -0.69
DNMT3A-215ENST00000496570 IQCJQ1A5X6 159 aa10.71□□□□□ -0.69
DNMT3A-215ENST00000496570 TRAV8-3A0A0A6YYJ7 113 aa10.7□□□□□ -0.7
DNMT3A-215ENST00000496570 ADIRFQ15847 76 aa10.7□□□□□ -0.7
DNMT3A-215ENST00000496570 TMEM97Q5BJF2 176 aa10.7□□□□□ -0.7
DNMT3A-215ENST00000496570 PGPEP1Q9NXJ5 209 aa10.7□□□□□ -0.7
DNMT3A-215ENST00000496570 URGCP-MRPS24S4R325 110 aa10.7□□□□□ -0.7
DNMT3A-215ENST00000496570 A0A087WX48 190 aa10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 A0A1B0GUT8 65 aa10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 EREGO14944 169 aa10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 PSCAO43653 123 aa10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 CDK2AP2O75956 126 aa10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 GAS8-AS1O95177 125 aa10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 IFITM2Q01629 132 aa10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 ATRAIDQ6UW56 229 aa10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 ENHOQ6UWT2 76 aa10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 C15orf54Q8N8G6 183 aa10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 NUP35Q8NFH5 326 aa10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 RPL39LQ96EH5 51 aaKnown RBP10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 CHCHD5Q9BSY4 110 aa10.69□□□□□ -0.7
DNMT3A-215ENST00000496570 TMEM262E9PQX1 116 aa10.68□□□□□ -0.7
DNMT3A-215ENST00000496570 CDPF1Q6NVV7 123 aa10.68□□□□□ -0.7
DNMT3A-215ENST00000496570 Q8N976 141 aa10.68□□□□□ -0.7
DNMT3A-215ENST00000496570 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.68□□□□□ -0.7
DNMT3A-215ENST00000496570 DEFB104AQ8WTQ1 72 aa10.68□□□□□ -0.7
DNMT3A-215ENST00000496570 FRZBQ92765 325 aa10.68□□□□□ -0.7
DNMT3A-215ENST00000496570 RNF185Q96GF1 192 aa10.68□□□□□ -0.7
DNMT3A-215ENST00000496570 TM2D2Q9BX73 214 aa10.68□□□□□ -0.7
DNMT3A-215ENST00000496570 TRBV25-1A0A075B6N4 114 aa10.67□□□□□ -0.7
DNMT3A-215ENST00000496570 IGHV1-24A0A0C4DH33 117 aa10.67□□□□□ -0.7
DNMT3A-215ENST00000496570 SMIM27A0A1W2PRY6 76 aa10.67□□□□□ -0.7
DNMT3A-215ENST00000496570 GAGE6Q13070 117 aa10.67□□□□□ -0.7
DNMT3A-215ENST00000496570 Q8N814 137 aa10.67□□□□□ -0.7
DNMT3A-215ENST00000496570 UBE2WQ96B02 151 aa10.67□□□□□ -0.7
DNMT3A-215ENST00000496570 TMEM191AQ9H0A3 160 aa10.67□□□□□ -0.7
DNMT3A-215ENST00000496570 RBX1P62877 108 aa10.66□□□□□ -0.7
DNMT3A-215ENST00000496570 ELOBQ15370 118 aa10.66□□□□□ -0.7
DNMT3A-215ENST00000496570 SMIM15Q7Z3B0 74 aa10.66□□□□□ -0.7
DNMT3A-215ENST00000496570 PCLOQ9Y6V0 5065 aa10.65□□□□□ -0.7
DNMT3A-215ENST00000496570 KRTAP10-1P60331 282 aa10.65□□□□□ -0.7
DNMT3A-215ENST00000496570 BORCS7Q96B45 105 aa10.65□□□□□ -0.7
DNMT3A-215ENST00000496570 PRR34Q9NV39 138 aa10.65□□□□□ -0.7
DNMT3A-215ENST00000496570 NAT8BQ9UHF3 227 aa10.65□□□□□ -0.7
DNMT3A-215ENST00000496570 RAB4AP20338 218 aa10.64□□□□□ -0.71
DNMT3A-215ENST00000496570 PKIAP61925 76 aa10.64□□□□□ -0.71
DNMT3A-215ENST00000496570 CLLU1Q5K131 121 aa10.64□□□□□ -0.71
DNMT3A-215ENST00000496570 KCNIP4Q6PIL6 250 aa10.64□□□□□ -0.71
DNMT3A-215ENST00000496570 AMN1Q8IY45 258 aa10.64□□□□□ -0.71
DNMT3A-215ENST00000496570 BAALCQ8WXS3 180 aa10.64□□□□□ -0.71
DNMT3A-215ENST00000496570 ABCA13Q86UQ4 5058 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms