RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 SMCO4Q9NRQ5 59 aa10.76□□□□□ -0.69
RAPGEF3-215ENST00000495953 NEGR1Q7Z3B1 354 aa10.75□□□□□ -0.69
RAPGEF3-215ENST00000495953 AMN1Q8IY45 258 aa10.75□□□□□ -0.69
RAPGEF3-215ENST00000495953 RNF185Q96GF1 192 aa10.75□□□□□ -0.69
RAPGEF3-215ENST00000495953 TRBV7-3A0A075B6L6 115 aa10.74□□□□□ -0.69
RAPGEF3-215ENST00000495953 TRBV24-1A0A075B6N3 115 aa10.74□□□□□ -0.69
RAPGEF3-215ENST00000495953 PPP1R17O96001 155 aa10.74□□□□□ -0.69
RAPGEF3-215ENST00000495953 ELOBQ15370 118 aa10.74□□□□□ -0.69
RAPGEF3-215ENST00000495953 NEXN-AS1Q8NBZ9 246 aa10.74□□□□□ -0.69
RAPGEF3-215ENST00000495953 NIT2Q9NQR4 276 aa10.74□□□□□ -0.69
RAPGEF3-215ENST00000495953 LOC100131303A0A0U1RQF7 123 aa10.73□□□□□ -0.69
RAPGEF3-215ENST00000495953 P0DMU3 169 aa10.73□□□□□ -0.69
RAPGEF3-215ENST00000495953 FAM231AP0DMU4 169 aa10.73□□□□□ -0.69
RAPGEF3-215ENST00000495953 FAM231CP0DMU5 169 aa10.73□□□□□ -0.69
RAPGEF3-215ENST00000495953 LINC00694P0DN24 101 aa10.73□□□□□ -0.69
RAPGEF3-215ENST00000495953 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.73□□□□□ -0.69
RAPGEF3-215ENST00000495953 GNB1LQ9BYB4 327 aa10.73□□□□□ -0.69
RAPGEF3-215ENST00000495953 TNFRSF18Q9Y5U5 241 aa10.73□□□□□ -0.69
RAPGEF3-215ENST00000495953 EPPK1P58107 5090 aaKnown RBP10.73□□□□□ -0.69
RAPGEF3-215ENST00000495953 GAGE12JA6NER3 117 aa10.72□□□□□ -0.69
RAPGEF3-215ENST00000495953 HLA-DQA1P01909 254 aa10.72□□□□□ -0.69
RAPGEF3-215ENST00000495953 PPBPP02775 128 aa10.72□□□□□ -0.69
RAPGEF3-215ENST00000495953 MT-ND6P03923 174 aa10.72□□□□□ -0.69
RAPGEF3-215ENST00000495953 TIRAPP58753 221 aa10.72□□□□□ -0.69
RAPGEF3-215ENST00000495953 GAGE1Q13065 139 aa10.72□□□□□ -0.69
RAPGEF3-215ENST00000495953 GAGE4Q13068 117 aa10.72□□□□□ -0.69
RAPGEF3-215ENST00000495953 GAGE5Q13069 117 aa10.72□□□□□ -0.69
RAPGEF3-215ENST00000495953 MRPL51Q4U2R6 128 aaKnown RBP10.72□□□□□ -0.69
RAPGEF3-215ENST00000495953 GAGE13Q4V321 117 aa10.72□□□□□ -0.69
RAPGEF3-215ENST00000495953 ATP6V0E2Q8NHE4 81 aa10.72□□□□□ -0.69
RAPGEF3-215ENST00000495953 ZNRF2Q8NHG8 242 aa10.72□□□□□ -0.69
RAPGEF3-215ENST00000495953 ATP6V1G1O75348 118 aa10.71□□□□□ -0.69
RAPGEF3-215ENST00000495953 CKS2P33552 79 aa10.71□□□□□ -0.69
RAPGEF3-215ENST00000495953 CCL18P55774 89 aa10.71□□□□□ -0.69
RAPGEF3-215ENST00000495953 UBE2D3P61077 147 aa10.71□□□□□ -0.69
RAPGEF3-215ENST00000495953 UBE2D2P62837 147 aa10.71□□□□□ -0.69
RAPGEF3-215ENST00000495953 TMEM136Q6ZRR5 245 aa10.71□□□□□ -0.69
RAPGEF3-215ENST00000495953 Q9UF83 564 aa10.71□□□□□ -0.69
RAPGEF3-215ENST00000495953 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
RAPGEF3-215ENST00000495953 TRAV26-2A0A0B4J265 109 aa10.7□□□□□ -0.7
RAPGEF3-215ENST00000495953 TRBV6-5A0A0K0K1A5 114 aa10.7□□□□□ -0.7
RAPGEF3-215ENST00000495953 LGALS9CQ6DKI2 356 aa10.7□□□□□ -0.7
RAPGEF3-215ENST00000495953 DAZ4Q86SG3 579 aaKnown RBP10.7□□□□□ -0.7
RAPGEF3-215ENST00000495953 YPEL4Q96NS1 127 aa10.7□□□□□ -0.7
RAPGEF3-215ENST00000495953 GTSF1LQ9H1H1 148 aa10.7□□□□□ -0.7
RAPGEF3-215ENST00000495953 DAZ3Q9NR90 486 aaKnown RBP10.7□□□□□ -0.7
RAPGEF3-215ENST00000495953 TMEM97Q5BJF2 176 aa10.69□□□□□ -0.7
RAPGEF3-215ENST00000495953 OR10J3Q5JRS4 329 aa10.69□□□□□ -0.7
RAPGEF3-215ENST00000495953 LYPD5Q6UWN5 251 aa10.69□□□□□ -0.7
RAPGEF3-215ENST00000495953 CBLN2Q8IUK8 224 aa10.69□□□□□ -0.7
RAPGEF3-215ENST00000495953 PHOX2AO14813 284 aa10.68□□□□□ -0.7
RAPGEF3-215ENST00000495953 ESRGQ1W209 222 aa10.68□□□□□ -0.7
RAPGEF3-215ENST00000495953 ORMDL3Q8N138 153 aa10.68□□□□□ -0.7
RAPGEF3-215ENST00000495953 LAMTOR2Q9Y2Q5 125 aa10.68□□□□□ -0.7
RAPGEF3-215ENST00000495953 D6R8Y8 96 aa10.67□□□□□ -0.7
RAPGEF3-215ENST00000495953 APCSP02743 223 aa10.67□□□□□ -0.7
RAPGEF3-215ENST00000495953 UBE2DNLQ8IWF7 75 aa10.67□□□□□ -0.7
RAPGEF3-215ENST00000495953 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
RAPGEF3-215ENST00000495953 C20orf78Q9BR46 151 aa10.67□□□□□ -0.7
RAPGEF3-215ENST00000495953 ST20Q9HBF5 79 aa10.67□□□□□ -0.7
RAPGEF3-215ENST00000495953 SMKR1H3BMG3 65 aa10.66□□□□□ -0.7
RAPGEF3-215ENST00000495953 NCR2O95944 276 aa10.66□□□□□ -0.7
RAPGEF3-215ENST00000495953 NRACQ8N912 160 aa10.66□□□□□ -0.7
RAPGEF3-215ENST00000495953 PRELID3AQ96N28 172 aa10.66□□□□□ -0.7
RAPGEF3-215ENST00000495953 MRPS16Q9Y3D3 137 aaKnown RBP10.66□□□□□ -0.7
RAPGEF3-215ENST00000495953 SDHAF1A6NFY7 115 aa10.65□□□□□ -0.7
RAPGEF3-215ENST00000495953 RPS10P46783 165 aaKnown RBP10.65□□□□□ -0.7
RAPGEF3-215ENST00000495953 RPL32P62910 135 aaKnown RBP10.65□□□□□ -0.7
RAPGEF3-215ENST00000495953 LELP1Q5T871 98 aa10.65□□□□□ -0.7
RAPGEF3-215ENST00000495953 LINC00476Q8WZB0 136 aa10.65□□□□□ -0.7
RAPGEF3-215ENST00000495953 UPK3BQ9BT76 320 aa10.65□□□□□ -0.7
RAPGEF3-215ENST00000495953 MRPL18Q9H0U6 180 aaKnown RBP10.65□□□□□ -0.7
RAPGEF3-215ENST00000495953 LINC00588Q9Y4M8 146 aa10.65□□□□□ -0.7
RAPGEF3-215ENST00000495953 TRAPPC1Q9Y5R8 145 aa10.65□□□□□ -0.7
RAPGEF3-215ENST00000495953 GAS8-AS1O95177 125 aa10.64□□□□□ -0.71
RAPGEF3-215ENST00000495953 TNFRSF6BO95407 300 aa10.64□□□□□ -0.71
RAPGEF3-215ENST00000495953 POLR2KP53803 58 aaKnown RBP10.64□□□□□ -0.71
RAPGEF3-215ENST00000495953 SUMO2P61956 95 aaKnown RBP10.64□□□□□ -0.71
RAPGEF3-215ENST00000495953 BIRC6Q9NR09 4857 aa10.64□□□□□ -0.71
RAPGEF3-215ENST00000495953 TRAV8-6A0A0B4J262 113 aa10.63□□□□□ -0.71
RAPGEF3-215ENST00000495953 TRBV27A0A0K0K1C4 114 aa10.63□□□□□ -0.71
RAPGEF3-215ENST00000495953 I3L3M4 83 aa10.63□□□□□ -0.71
RAPGEF3-215ENST00000495953 VCYO14598 125 aa10.63□□□□□ -0.71
RAPGEF3-215ENST00000495953 FABP9Q0Z7S8 132 aa10.63□□□□□ -0.71
RAPGEF3-215ENST00000495953 TMEM70Q9BUB7 260 aa10.63□□□□□ -0.71
RAPGEF3-215ENST00000495953 TRBV6-8A0A0A6YYG3 113 aa10.62□□□□□ -0.71
RAPGEF3-215ENST00000495953 IGHV3-38A0A0C4DH36 116 aa10.62□□□□□ -0.71
RAPGEF3-215ENST00000495953 PRSS47A8MTI9 375 aa10.62□□□□□ -0.71
RAPGEF3-215ENST00000495953 TCAPO15273 167 aa10.62□□□□□ -0.71
RAPGEF3-215ENST00000495953 NPYP01303 97 aa10.62□□□□□ -0.71
RAPGEF3-215ENST00000495953 PMCHP20382 165 aa10.62□□□□□ -0.71
RAPGEF3-215ENST00000495953 COTL1Q14019 142 aa10.62□□□□□ -0.71
RAPGEF3-215ENST00000495953 COLCA2A8K830 154 aa10.61□□□□□ -0.71
RAPGEF3-215ENST00000495953 SCO1O75880 301 aa10.61□□□□□ -0.71
RAPGEF3-215ENST00000495953 LY6G6CO95867 125 aa10.61□□□□□ -0.71
RAPGEF3-215ENST00000495953 TRBV25-1A0A075B6N4 114 aa10.6□□□□□ -0.71
RAPGEF3-215ENST00000495953 PKIAP61925 76 aa10.6□□□□□ -0.71
RAPGEF3-215ENST00000495953 IQCJQ1A5X6 159 aa10.6□□□□□ -0.71
RAPGEF3-215ENST00000495953 KIAA1644Q3SXP7 199 aa10.6□□□□□ -0.71
RAPGEF3-215ENST00000495953 KIR2DL4Q99706 377 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms