RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 NTN5Q8WTR8 489 aaPredicted RBP11.37□□□□□ -0.59
SDF4-207ENST00000494748 RHPN1-AS1Q9BWJ2 59 aa11.37□□□□□ -0.59
SDF4-207ENST00000494748 SS18L2Q9UHA2 77 aa11.37□□□□□ -0.59
SDF4-207ENST00000494748 ZNF256Q9Y2P7 627 aaPredicted RBP11.37□□□□□ -0.59
SDF4-207ENST00000494748 PTPRQQ9UMZ3 2332 aa11.37□□□□□ -0.59
SDF4-207ENST00000494748 WNK1Q9H4A3 2382 aa11.37□□□□□ -0.59
SDF4-207ENST00000494748 IGHV3-16A0A0C4DH30 117 aa11.37□□□□□ -0.59
SDF4-207ENST00000494748 RPL13AP40429 203 aaKnown RBP11.37□□□□□ -0.59
SDF4-207ENST00000494748 LINC01620Q4KN68 170 aa11.37□□□□□ -0.59
SDF4-207ENST00000494748 FAM159AQ6UWV7 190 aa11.37□□□□□ -0.59
SDF4-207ENST00000494748 IGHV3-64A0A075B6Q5 118 aa11.36□□□□□ -0.59
SDF4-207ENST00000494748 IGHV3-11P01762 117 aa11.36□□□□□ -0.59
SDF4-207ENST00000494748 MDFICQ9P1T7 246 aa11.36□□□□□ -0.59
SDF4-207ENST00000494748 A0A0J9YXY3 114 aa11.36□□□□□ -0.59
SDF4-207ENST00000494748 F5H697 171 aa11.36□□□□□ -0.59
SDF4-207ENST00000494748 K7ENP7 123 aa11.36□□□□□ -0.59
SDF4-207ENST00000494748 RPL11P62913 178 aaKnown RBP11.36□□□□□ -0.59
SDF4-207ENST00000494748 RHOHQ15669 191 aa11.36□□□□□ -0.59
SDF4-207ENST00000494748 DCANP1Q8TF63 244 aa11.36□□□□□ -0.59
SDF4-207ENST00000494748 H7C2G1 150 aa11.36□□□□□ -0.59
SDF4-207ENST00000494748 CFAP161Q6P656 301 aa11.36□□□□□ -0.59
SDF4-207ENST00000494748 MYO9AB2RTY4 2548 aa11.36□□□□□ -0.59
SDF4-207ENST00000494748 PRRC2AP48634 2157 aaKnown RBP11.36□□□□□ -0.59
SDF4-207ENST00000494748 NCOR2Q9Y618 2525 aa11.35□□□□□ -0.59
SDF4-207ENST00000494748 IGLV4-3A0A075B6K6 122 aa11.35□□□□□ -0.59
SDF4-207ENST00000494748 TRAV12-3A0A0B4J271 114 aa11.35□□□□□ -0.59
SDF4-207ENST00000494748 TEX49A0A1B0GTD5 131 aa11.35□□□□□ -0.59
SDF4-207ENST00000494748 TRIAP1O43715 76 aa11.35□□□□□ -0.59
SDF4-207ENST00000494748 GAGE5Q13069 117 aa11.35□□□□□ -0.59
SDF4-207ENST00000494748 GAGE6Q13070 117 aa11.35□□□□□ -0.59
SDF4-207ENST00000494748 C20orf203Q8NBC4 194 aa11.35□□□□□ -0.59
SDF4-207ENST00000494748 A0A0J9YXV3 536 aa11.35□□□□□ -0.59
SDF4-207ENST00000494748 TRBV30A0A0K0K1B3 111 aa11.35□□□□□ -0.59
SDF4-207ENST00000494748 NDUFV3P56181 108 aaKnown RBP11.35□□□□□ -0.59
SDF4-207ENST00000494748 FAM74A4Q5TZK3 123 aa11.34□□□□□ -0.59
SDF4-207ENST00000494748 IGHV3OR16-10A0A075B7F0 116 aa11.34□□□□□ -0.59
SDF4-207ENST00000494748 BPESC1Q9GZL8 116 aa11.34□□□□□ -0.59
SDF4-207ENST00000494748 NBL1P41271 181 aa11.34□□□□□ -0.59
SDF4-207ENST00000494748 ATXN8Q156A1 80 aa11.34□□□□□ -0.59
SDF4-207ENST00000494748 CRYBG3Q68DQ2 2970 aa11.33□□□□□ -0.6
SDF4-207ENST00000494748 TRBV10-2A0A0K0K1G8 114 aa11.32□□□□□ -0.6
SDF4-207ENST00000494748 USMG5Q96IX5 58 aa11.32□□□□□ -0.6
SDF4-207ENST00000494748 COL12A1Q99715 3063 aa11.32□□□□□ -0.6
SDF4-207ENST00000494748 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.32□□□□□ -0.6
SDF4-207ENST00000494748 ADAMTSL4-AS1Q5T5F5 129 aa11.32□□□□□ -0.6
SDF4-207ENST00000494748 Q6Q795 121 aa11.32□□□□□ -0.6
SDF4-207ENST00000494748 B5MCH6 92 aa11.32□□□□□ -0.6
SDF4-207ENST00000494748 IGHV4-39P01824 125 aa11.32□□□□□ -0.6
SDF4-207ENST00000494748 IGHV3-30-3P0DP02 117 aa11.32□□□□□ -0.6
SDF4-207ENST00000494748 ADARB2-AS1A8MUL3 147 aa11.31□□□□□ -0.6
SDF4-207ENST00000494748 H3BUA1 57 aa11.31□□□□□ -0.6
SDF4-207ENST00000494748 IGHG2P01859 326 aa11.31□□□□□ -0.6
SDF4-207ENST00000494748 ZNF56Q15929 161 aa11.31□□□□□ -0.6
SDF4-207ENST00000494748 DAZ1Q9NQZ3 744 aaKnown RBP11.31□□□□□ -0.6
SDF4-207ENST00000494748 CCDC179H3BU77 68 aa11.31□□□□□ -0.6
SDF4-207ENST00000494748 GAGE2BQ13066 116 aa11.31□□□□□ -0.6
SDF4-207ENST00000494748 GAGE2EQ4V326 116 aa11.31□□□□□ -0.6
SDF4-207ENST00000494748 GAGE2DQ9UEU5 116 aa11.31□□□□□ -0.6
SDF4-207ENST00000494748 H7C423 109 aa11.3□□□□□ -0.6
SDF4-207ENST00000494748 BRD3OSQ6XYD6 125 aa11.3□□□□□ -0.6
SDF4-207ENST00000494748 TRAV12-2A0A075B6T6 113 aa11.3□□□□□ -0.6
SDF4-207ENST00000494748 IGLV1-40P01703 118 aa11.3□□□□□ -0.6
SDF4-207ENST00000494748 TLN2Q9Y4G6 2542 aa11.3□□□□□ -0.6
SDF4-207ENST00000494748 SNCGO76070 127 aa11.3□□□□□ -0.6
SDF4-207ENST00000494748 Q6ZSV7 163 aa11.3□□□□□ -0.6
SDF4-207ENST00000494748 CACNA1AO00555 2505 aa11.29□□□□□ -0.6
SDF4-207ENST00000494748 MRPS36P82909 103 aaKnown RBP11.29□□□□□ -0.6
SDF4-207ENST00000494748 I3L3M4 83 aa11.29□□□□□ -0.6
SDF4-207ENST00000494748 TRAV8-3A0A0A6YYJ7 113 aa11.29□□□□□ -0.6
SDF4-207ENST00000494748 CFHR3Q02985 330 aa11.29□□□□□ -0.6
SDF4-207ENST00000494748 SPANXDQ9BXN6 97 aa11.29□□□□□ -0.6
SDF4-207ENST00000494748 SPANXCQ9NY87 97 aa11.29□□□□□ -0.6
SDF4-207ENST00000494748 BEX4Q9NWD9 120 aaPredicted RBP11.28□□□□□ -0.6
SDF4-207ENST00000494748 ICOSQ9Y6W8 199 aa11.28□□□□□ -0.6
SDF4-207ENST00000494748 USP9YO00507 2555 aaPredicted RBP11.28□□□□□ -0.6
SDF4-207ENST00000494748 TRAV8-4A0A0B4J246 113 aa11.27□□□□□ -0.6
SDF4-207ENST00000494748 H3BMM0 161 aa11.27□□□□□ -0.6
SDF4-207ENST00000494748 Q1RN00 199 aa11.27□□□□□ -0.6
SDF4-207ENST00000494748 UBE2WQ96B02 151 aa11.27□□□□□ -0.6
SDF4-207ENST00000494748 BLCAPP62952 87 aa11.27□□□□□ -0.61
SDF4-207ENST00000494748 SPXQ9BT56 116 aa11.27□□□□□ -0.61
SDF4-207ENST00000494748 PYGO1Q9Y3Y4 419 aa11.27□□□□□ -0.61
SDF4-207ENST00000494748 K7EMT4 169 aa11.27□□□□□ -0.61
SDF4-207ENST00000494748 PF4V1P10720 104 aa11.27□□□□□ -0.61
SDF4-207ENST00000494748 IFITM1P13164 125 aa11.27□□□□□ -0.61
SDF4-207ENST00000494748 C15orf53Q8NAA6 179 aa11.27□□□□□ -0.61
SDF4-207ENST00000494748 A6NDX4 124 aa11.26□□□□□ -0.61
SDF4-207ENST00000494748 LY6EQ16553 131 aa11.26□□□□□ -0.61
SDF4-207ENST00000494748 DEFB121Q5J5C9 76 aa11.26□□□□□ -0.61
SDF4-207ENST00000494748 TIMM21Q9BVV7 248 aa11.26□□□□□ -0.61
SDF4-207ENST00000494748 UBTD1Q9HAC8 227 aa11.26□□□□□ -0.61
SDF4-207ENST00000494748 CEMP1Q6PRD7 247 aaPredicted RBP11.26□□□□□ -0.61
SDF4-207ENST00000494748 CHD8Q9HCK8 2581 aa11.25□□□□□ -0.61
SDF4-207ENST00000494748 A8MZ25 164 aa11.25□□□□□ -0.61
SDF4-207ENST00000494748 ID1P41134 155 aa11.25□□□□□ -0.61
SDF4-207ENST00000494748 EDA2RQ9HAV5 297 aa11.25□□□□□ -0.61
SDF4-207ENST00000494748 IGHV1OR15-1A0A075B7D0 117 aa11.25□□□□□ -0.61
SDF4-207ENST00000494748 IGHV1-58A0A0C4DH39 117 aa11.25□□□□□ -0.61
SDF4-207ENST00000494748 IGHV4-38-2P0DP08 117 aa11.25□□□□□ -0.61
SDF4-207ENST00000494748 MIAQ16674 131 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms