RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 FMC1Q96HJ9 113 aa9.46□□□□□ -0.9
PCCB-219ENST00000494742 FAM74A7A6NL05 159 aa9.45□□□□□ -0.9
PCCB-219ENST00000494742 RAB4BP61018 213 aa9.45□□□□□ -0.9
PCCB-219ENST00000494742 MIAQ16674 131 aa9.45□□□□□ -0.9
PCCB-219ENST00000494742 ZNF674Q2M3X9 581 aa9.45□□□□□ -0.9
PCCB-219ENST00000494742 AKR1C8PQ5T2L2 129 aa9.45□□□□□ -0.9
PCCB-219ENST00000494742 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.45□□□□□ -0.9
PCCB-219ENST00000494742 TRBV6-1A0A0K0K1D8 114 aa9.44□□□□□ -0.9
PCCB-219ENST00000494742 USP17L23D6RBM5 183 aa9.44□□□□□ -0.9
PCCB-219ENST00000494742 UBE2G2P60604 165 aa9.44□□□□□ -0.9
PCCB-219ENST00000494742 ZNF726P1Q15940 193 aa9.44□□□□□ -0.9
PCCB-219ENST00000494742 C15orf54Q8N8G6 183 aa9.44□□□□□ -0.9
PCCB-219ENST00000494742 C9orf163Q8N9P6 203 aa9.44□□□□□ -0.9
PCCB-219ENST00000494742 DAZAP1Q96EP5 407 aaKnown RBP9.44□□□□□ -0.9
PCCB-219ENST00000494742 TCEAL7Q9BRU2 100 aa9.44□□□□□ -0.9
PCCB-219ENST00000494742 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
PCCB-219ENST00000494742 ANGP03950 147 aaKnown RBP9.43□□□□□ -0.9
PCCB-219ENST00000494742 S100A1P23297 94 aa9.43□□□□□ -0.9
PCCB-219ENST00000494742 UBE2G1P62253 170 aa9.43□□□□□ -0.9
PCCB-219ENST00000494742 MPV17L2Q567V2 206 aa9.43□□□□□ -0.9
PCCB-219ENST00000494742 TMEM97Q5BJF2 176 aa9.43□□□□□ -0.9
PCCB-219ENST00000494742 FAM213BQ8TBF2 198 aa9.43□□□□□ -0.9
PCCB-219ENST00000494742 LTAP01374 205 aa9.42□□□□□ -0.9
PCCB-219ENST00000494742 PRSS1P07477 247 aa9.42□□□□□ -0.9
PCCB-219ENST00000494742 RPL19P84098 196 aaKnown RBP9.42□□□□□ -0.9
PCCB-219ENST00000494742 PRR27Q6MZM9 219 aa9.42□□□□□ -0.9
PCCB-219ENST00000494742 LYPD6BQ8NI32 183 aa9.42□□□□□ -0.9
PCCB-219ENST00000494742 TMSB15BA0A087X1C1 80 aa9.41□□□□□ -0.9
PCCB-219ENST00000494742 HLA-DQA1P01909 254 aa9.41□□□□□ -0.9
PCCB-219ENST00000494742 FHITP49789 147 aa9.41□□□□□ -0.9
PCCB-219ENST00000494742 HNRNPA3P51991 378 aaKnown RBP9.41□□□□□ -0.9
PCCB-219ENST00000494742 Q6ZRU5 148 aa9.41□□□□□ -0.9
PCCB-219ENST00000494742 NEXN-AS1Q8NBZ9 246 aa9.41□□□□□ -0.9
PCCB-219ENST00000494742 CHCHD5Q9BSY4 110 aa9.41□□□□□ -0.9
PCCB-219ENST00000494742 PRR34Q9NV39 138 aa9.41□□□□□ -0.9
PCCB-219ENST00000494742 PKHD1L1Q86WI1 4243 aa9.41□□□□□ -0.9
PCCB-219ENST00000494742 RAB19A4D1S5 217 aa9.4□□□□□ -0.9
PCCB-219ENST00000494742 TEX46H3BTG2 121 aa9.4□□□□□ -0.9
PCCB-219ENST00000494742 CXCL1P09341 107 aa9.4□□□□□ -0.9
PCCB-219ENST00000494742 H2AFB1P0C5Y9 115 aa9.4□□□□□ -0.9
PCCB-219ENST00000494742 ZNF56Q15929 161 aa9.4□□□□□ -0.9
PCCB-219ENST00000494742 CLRN3Q8NCR9 226 aa9.4□□□□□ -0.9
PCCB-219ENST00000494742 TRAV1-1A0A0B4J248 108 aa9.39□□□□□ -0.91
PCCB-219ENST00000494742 UQCC3Q6UW78 93 aa9.39□□□□□ -0.91
PCCB-219ENST00000494742 SDIM1Q6ZPB5 146 aa9.39□□□□□ -0.91
PCCB-219ENST00000494742 MBD3L1Q8WWY6 194 aa9.39□□□□□ -0.91
PCCB-219ENST00000494742 VAX2Q9UIW0 290 aa9.39□□□□□ -0.91
PCCB-219ENST00000494742 MT1HL1P0DM35 61 aa9.38□□□□□ -0.91
PCCB-219ENST00000494742 KRTAP26-1Q6PEX3 210 aa9.38□□□□□ -0.91
PCCB-219ENST00000494742 SFT2D1Q8WV19 159 aa9.38□□□□□ -0.91
PCCB-219ENST00000494742 SSBP4Q9BWG4 385 aaPredicted RBP9.38□□□□□ -0.91
PCCB-219ENST00000494742 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.38□□□□□ -0.91
PCCB-219ENST00000494742 MAP1LC3B2A6NCE7 125 aa9.37□□□□□ -0.91
PCCB-219ENST00000494742 S100A9P06702 114 aaKnown RBP9.37□□□□□ -0.91
PCCB-219ENST00000494742 RBX1P62877 108 aa9.37□□□□□ -0.91
PCCB-219ENST00000494742 CIRBPQ14011 172 aaKnown RBP9.37□□□□□ -0.91
PCCB-219ENST00000494742 NTM-AS1Q6ZSK4 140 aa9.37□□□□□ -0.91
PCCB-219ENST00000494742 OR10AG1Q8NH19 301 aa9.37□□□□□ -0.91
PCCB-219ENST00000494742 MAP1LC3BQ9GZQ8 125 aa9.37□□□□□ -0.91
PCCB-219ENST00000494742 TRBV25-1A0A075B6N4 114 aa9.36□□□□□ -0.91
PCCB-219ENST00000494742 SNAI2O43623 268 aa9.36□□□□□ -0.91
PCCB-219ENST00000494742 OR5AL1P0C617 328 aa9.36□□□□□ -0.91
PCCB-219ENST00000494742 AKR1C3P42330 323 aa9.36□□□□□ -0.91
PCCB-219ENST00000494742 CNBPP62633 177 aaKnown RBP9.36□□□□□ -0.91
PCCB-219ENST00000494742 CST9LP1Q5W188 147 aa9.36□□□□□ -0.91
PCCB-219ENST00000494742 LINC00269Q8N2A0 174 aa9.36□□□□□ -0.91
PCCB-219ENST00000494742 RNF185Q96GF1 192 aa9.36□□□□□ -0.91
PCCB-219ENST00000494742 F5H697 171 aa9.35□□□□□ -0.91
PCCB-219ENST00000494742 PANO1I0J062 215 aa9.35□□□□□ -0.91
PCCB-219ENST00000494742 FAM210AQ96ND0 272 aa9.35□□□□□ -0.91
PCCB-219ENST00000494742 DERL1Q9BUN8 251 aa9.35□□□□□ -0.91
PCCB-219ENST00000494742 TRAV8-4A0A0B4J246 113 aa9.34□□□□□ -0.91
PCCB-219ENST00000494742 A0A1B0GV50 99 aa9.34□□□□□ -0.91
PCCB-219ENST00000494742 P01737 135 aa9.34□□□□□ -0.91
PCCB-219ENST00000494742 CCL20P78556 96 aa9.34□□□□□ -0.91
PCCB-219ENST00000494742 IQCJQ1A5X6 159 aa9.34□□□□□ -0.91
PCCB-219ENST00000494742 SPANXN1Q5VSR9 72 aa9.34□□□□□ -0.91
PCCB-219ENST00000494742 MLST8Q9BVC4 326 aa9.34□□□□□ -0.91
PCCB-219ENST00000494742 SMIM17P0DL12 118 aa9.33□□□□□ -0.92
PCCB-219ENST00000494742 GZMBP10144 247 aa9.33□□□□□ -0.92
PCCB-219ENST00000494742 REG3AQ06141 175 aa9.33□□□□□ -0.92
PCCB-219ENST00000494742 GAGE6Q13070 117 aa9.33□□□□□ -0.92
PCCB-219ENST00000494742 PEA15Q15121 130 aa9.33□□□□□ -0.92
PCCB-219ENST00000494742 CLPSL2Q6UWE3 100 aa9.33□□□□□ -0.92
PCCB-219ENST00000494742 KIF25-AS1Q9Y6Z4 181 aa9.33□□□□□ -0.92
PCCB-219ENST00000494742 IGHV3-64A0A075B6Q5 118 aa9.32□□□□□ -0.92
PCCB-219ENST00000494742 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.32□□□□□ -0.92
PCCB-219ENST00000494742 IGHV1-24A0A0C4DH33 117 aa9.32□□□□□ -0.92
PCCB-219ENST00000494742 SRSF3P84103 164 aaKnown RBP9.32□□□□□ -0.92
PCCB-219ENST00000494742 AP1S3Q96PC3 154 aa9.32□□□□□ -0.92
PCCB-219ENST00000494742 EIF5A2Q9GZV4 153 aaKnown RBP9.32□□□□□ -0.92
PCCB-219ENST00000494742 SMDT1Q9H4I9 107 aa9.32□□□□□ -0.92
PCCB-219ENST00000494742 A0A1B0GUV1 79 aa9.31□□□□□ -0.92
PCCB-219ENST00000494742 hDV102S1A0JD36 115 aa9.31□□□□□ -0.92
PCCB-219ENST00000494742 TMEM218A2RU14 115 aa9.31□□□□□ -0.92
PCCB-219ENST00000494742 PAGE4O60829 102 aa9.31□□□□□ -0.92
PCCB-219ENST00000494742 IFNA1P01562 189 aa9.31□□□□□ -0.92
PCCB-219ENST00000494742 BAGE2Q86Y30 109 aa9.31□□□□□ -0.92
PCCB-219ENST00000494742 AP5S1Q9NUS5 200 aa9.31□□□□□ -0.92
PCCB-219ENST00000494742 H7C1H1 209 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms