RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 MYH1P12882 1939 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 PTPRSQ13332 1948 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 ANAPC1Q9H1A4 1944 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 TRBV7-3A0A075B6L6 115 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 TRBV25-1A0A075B6N4 114 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 TMSB15BA0A087X1C1 80 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 TRAV12-3A0A0B4J271 114 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 TRAV22A0A0B4J277 110 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 A0A0G2JND7 137 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 A0A1W2PNM2 257 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 TMEM30CPA0ZSE6 113 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 UMAD1C9J7I0 102 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 IGHV3-33P01772 117 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 SFTA3P0C7M3 94 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 KRTAP10-10P60014 251 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 MOBPQ13875 183 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 LINC00483Q53H64 154 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 CLECL1Q8IZS7 167 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 Q8N6K4 173 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 C9orf163Q8N9P6 203 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 C4orf3Q8WVX3 66 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 DYNLRB1Q9NP97 96 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 C1orf167Q5SNV9 1468 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 CDK13Q14004 1512 aaKnown RBP1.29□□□□□ -2.2
PTPN12-212ENST00000494248 RGPD3A6NKT7 1758 aaPredicted RBP1.29□□□□□ -2.2
PTPN12-212ENST00000494248 LAMB1P07942 1786 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 MYH8P13535 1937 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 SCN9AQ15858 1988 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 TRBV10-1A0A0K0K1A3 114 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 SDHAF1A6NFY7 115 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 C2orf70A6NJV1 201 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 TMEM14DPA8MWL7 114 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 PRB4P10163 310 aaPredicted RBP1.28□□□□□ -2.2
PTPN12-212ENST00000494248 EDDM3BP56851 147 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 CNBPP62633 177 aaKnown RBP1.28□□□□□ -2.2
PTPN12-212ENST00000494248 LY6EQ16553 131 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 DEFB121Q5J5C9 76 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 PSMG4Q5JS54 123 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 C10orf128Q5T292 105 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 Q5VV11 94 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 XAF1Q6GPH4 301 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 LYPD1Q8N2G4 141 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 IFI27L1Q96BM0 104 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 DMAC1Q96GE9 116 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 BPESC1Q9GZL8 116 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 PRO2289Q9P1D8 64 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 R4GN34 69 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 PLA2R1Q13018 1463 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 PLXNC1O60486 1568 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 LAMB4A4D0S4 1761 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 MYLKQ15746 1914 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 SCN8AQ9UQD0 1980 aa1.28□□□□□ -2.2
PTPN12-212ENST00000494248 CITO14578 2027 aa1.27□□□□□ -2.21
PTPN12-212ENST00000494248 TANC2Q9HCD6 1990 aa1.27□□□□□ -2.21
PTPN12-212ENST00000494248 DOCK1Q14185 1865 aa1.27□□□□□ -2.21
PTPN12-212ENST00000494248 CHKB-CPT1BH3BT56 60 aa1.27□□□□□ -2.21
PTPN12-212ENST00000494248 HMGN2P05204 90 aaKnown RBP1.27□□□□□ -2.21
PTPN12-212ENST00000494248 UBE2D1P51668 147 aa1.27□□□□□ -2.21
PTPN12-212ENST00000494248 ELOF1P60002 83 aaKnown RBP1.27□□□□□ -2.21
PTPN12-212ENST00000494248 ZNF56Q15929 161 aa1.27□□□□□ -2.21
PTPN12-212ENST00000494248 C1orf137Q5JT78 98 aa1.27□□□□□ -2.21
PTPN12-212ENST00000494248 Q6ZTI0 123 aa1.27□□□□□ -2.21
PTPN12-212ENST00000494248 FAM223AQ8IWN6 122 aa1.27□□□□□ -2.21
PTPN12-212ENST00000494248 TVP23CQ96ET8 276 aa1.27□□□□□ -2.21
PTPN12-212ENST00000494248 CDC42SE2Q9NRR3 84 aa1.27□□□□□ -2.21
PTPN12-212ENST00000494248 CHD3Q12873 2000 aaKnown RBP1.27□□□□□ -2.21
PTPN12-212ENST00000494248 MGAMO43451 1857 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 KIAA1549LQ6ZVL6 1849 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 SLX4Q8IY92 1834 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 NWD2Q9ULI1 1742 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 ADAMTS7Q9UKP4 1686 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 ASXL1Q8IXJ9 1541 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 PRXQ9BXM0 1461 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 TRAV40A0A0B4J280 105 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 A0A0J9YY99 117 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 TEX49A0A1B0GTD5 131 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 LOC101927531A0A1B0GV80 90 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 LOC285095A0A1B0GVY8 99 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 NUPR2A6NF83 97 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 HIGD1CA8MV81 97 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 TFF1P04155 84 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 COX8AP10176 69 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 MDKP21741 143 aaPredicted RBP1.26□□□□□ -2.21
PTPN12-212ENST00000494248 CSAG1Q6PB30 78 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 SMIM5Q71RC9 77 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 MRPL36Q9P0J6 103 aaKnown RBP1.26□□□□□ -2.21
PTPN12-212ENST00000494248 ORMDL1Q9P0S3 153 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 THADAQ6YHU6 1953 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 COL4A6Q14031 1691 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 TOP2BQ02880 1626 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 ABCA6Q8N139 1617 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 RAPGEF6Q8TEU7 1601 aa1.26□□□□□ -2.21
PTPN12-212ENST00000494248 SVILO95425 2214 aa1.25□□□□□ -2.21
PTPN12-212ENST00000494248 TOP2AP11388 1531 aaKnown RBP1.25□□□□□ -2.21
PTPN12-212ENST00000494248 HMGXB3Q12766 1538 aa1.25□□□□□ -2.21
PTPN12-212ENST00000494248 NEXMIFQ5QGS0 1516 aa1.25□□□□□ -2.21
PTPN12-212ENST00000494248 GREB1Q4ZG55 1949 aa1.25□□□□□ -2.21
PTPN12-212ENST00000494248 LTBP2Q14767 1821 aa1.25□□□□□ -2.21
PTPN12-212ENST00000494248 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
PTPN12-212ENST00000494248 IGLV3-32A0A0A0MS00 114 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms