RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 HSPG2P98160 4391 aa9.82□□□□□ -0.84
ATG4B-224ENST00000494132 SMIM7Q9BQ49 75 aa9.82□□□□□ -0.84
ATG4B-224ENST00000494132 KRTAP17-1Q9BYP8 105 aa9.82□□□□□ -0.84
ATG4B-224ENST00000494132 URGCP-MRPS24S4R325 110 aa9.82□□□□□ -0.84
ATG4B-224ENST00000494132 APOBP04114 4563 aaKnown RBP9.82□□□□□ -0.84
ATG4B-224ENST00000494132 F2Z2F3 143 aa9.81□□□□□ -0.84
ATG4B-224ENST00000494132 GATCO43716 136 aaKnown RBP9.81□□□□□ -0.84
ATG4B-224ENST00000494132 SRP19P09132 144 aaKnown RBP9.81□□□□□ -0.84
ATG4B-224ENST00000494132 CTRLP40313 264 aa9.81□□□□□ -0.84
ATG4B-224ENST00000494132 TWIST1Q15672 202 aa9.81□□□□□ -0.84
ATG4B-224ENST00000494132 DEFB104AQ8WTQ1 72 aa9.81□□□□□ -0.84
ATG4B-224ENST00000494132 GTSF1Q8WW33 167 aa9.81□□□□□ -0.84
ATG4B-224ENST00000494132 KLK12Q9UKR0 248 aa9.81□□□□□ -0.84
ATG4B-224ENST00000494132 TRBV6-8A0A0A6YYG3 113 aa9.8□□□□□ -0.84
ATG4B-224ENST00000494132 LRCOL1A6NCL2 159 aa9.8□□□□□ -0.84
ATG4B-224ENST00000494132 ZNF727A8MUV8 499 aa9.8□□□□□ -0.84
ATG4B-224ENST00000494132 TMEM262E9PQX1 116 aa9.8□□□□□ -0.84
ATG4B-224ENST00000494132 M0QY20 66 aa9.8□□□□□ -0.84
ATG4B-224ENST00000494132 TRGC1P0CF51 173 aa9.8□□□□□ -0.84
ATG4B-224ENST00000494132 WFDC2Q14508 124 aa9.8□□□□□ -0.84
ATG4B-224ENST00000494132 LAGE3Q14657 143 aa9.8□□□□□ -0.84
ATG4B-224ENST00000494132 DPH3P1Q9H4G8 78 aa9.8□□□□□ -0.84
ATG4B-224ENST00000494132 A0A087WX48 190 aa9.79□□□□□ -0.84
ATG4B-224ENST00000494132 NTM-AS1Q6ZSK4 140 aa9.79□□□□□ -0.84
ATG4B-224ENST00000494132 UBE2WQ96B02 151 aa9.79□□□□□ -0.84
ATG4B-224ENST00000494132 LECT2O14960 151 aa9.78□□□□□ -0.84
ATG4B-224ENST00000494132 CDK2AP2O75956 126 aa9.78□□□□□ -0.84
ATG4B-224ENST00000494132 FOXA3P55318 350 aaPredicted RBP9.78□□□□□ -0.84
ATG4B-224ENST00000494132 MPV17L2Q567V2 206 aa9.78□□□□□ -0.84
ATG4B-224ENST00000494132 TEX261Q6UWH6 196 aa9.78□□□□□ -0.84
ATG4B-224ENST00000494132 FAM231DQ6ZW35 169 aa9.78□□□□□ -0.84
ATG4B-224ENST00000494132 LINC01551Q86U37 167 aa9.78□□□□□ -0.84
ATG4B-224ENST00000494132 PGLYRP4Q96LB8 373 aa9.78□□□□□ -0.84
ATG4B-224ENST00000494132 CHCHD5Q9BSY4 110 aa9.78□□□□□ -0.84
ATG4B-224ENST00000494132 KRTAP4-5Q9BYR2 181 aa9.78□□□□□ -0.84
ATG4B-224ENST00000494132 PGPEP1Q9NXJ5 209 aa9.78□□□□□ -0.84
ATG4B-224ENST00000494132 IGKV2D-24A0A075B6R9 120 aa9.77□□□□□ -0.85
ATG4B-224ENST00000494132 TRAV8-3A0A0A6YYJ7 113 aa9.77□□□□□ -0.85
ATG4B-224ENST00000494132 TRAV26-2A0A0B4J265 109 aa9.77□□□□□ -0.85
ATG4B-224ENST00000494132 C9JQL5 133 aa9.77□□□□□ -0.85
ATG4B-224ENST00000494132 SRSF3P84103 164 aaKnown RBP9.77□□□□□ -0.85
ATG4B-224ENST00000494132 KCNIP4Q6PIL6 250 aa9.77□□□□□ -0.85
ATG4B-224ENST00000494132 MAPKAPK5-AS1Q8N8E1 139 aa9.77□□□□□ -0.85
ATG4B-224ENST00000494132 C15orf54Q8N8G6 183 aa9.77□□□□□ -0.85
ATG4B-224ENST00000494132 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.77□□□□□ -0.85
ATG4B-224ENST00000494132 CNFNQ9BYD5 112 aa9.77□□□□□ -0.85
ATG4B-224ENST00000494132 H7C1H1 209 aa9.76□□□□□ -0.85
ATG4B-224ENST00000494132 KRTAP10-1P60331 282 aa9.76□□□□□ -0.85
ATG4B-224ENST00000494132 GAGE6Q13070 117 aa9.76□□□□□ -0.85
ATG4B-224ENST00000494132 RASL11AQ6T310 242 aa9.76□□□□□ -0.85
ATG4B-224ENST00000494132 Q8N976 141 aa9.76□□□□□ -0.85
ATG4B-224ENST00000494132 TM2D2Q9BX73 214 aa9.76□□□□□ -0.85
ATG4B-224ENST00000494132 A8MWL6 223 aa9.75□□□□□ -0.85
ATG4B-224ENST00000494132 CDPF1Q6NVV7 123 aa9.75□□□□□ -0.85
ATG4B-224ENST00000494132 WDR73Q6P4I2 378 aa9.75□□□□□ -0.85
ATG4B-224ENST00000494132 Q8N814 137 aa9.75□□□□□ -0.85
ATG4B-224ENST00000494132 BAALCQ8WXS3 180 aa9.75□□□□□ -0.85
ATG4B-224ENST00000494132 TRBV25-1A0A075B6N4 114 aa9.74□□□□□ -0.85
ATG4B-224ENST00000494132 IGLV5-52A0A0A0MRZ9 124 aa9.74□□□□□ -0.85
ATG4B-224ENST00000494132 ANGP03950 147 aaKnown RBP9.74□□□□□ -0.85
ATG4B-224ENST00000494132 ATRAIDQ6UW56 229 aa9.74□□□□□ -0.85
ATG4B-224ENST00000494132 CLPSL2Q6UWE3 100 aa9.74□□□□□ -0.85
ATG4B-224ENST00000494132 GATD1Q8NB37 220 aa9.74□□□□□ -0.85
ATG4B-224ENST00000494132 RPL39LQ96EH5 51 aaKnown RBP9.74□□□□□ -0.85
ATG4B-224ENST00000494132 CHCHD7Q9BUK0 85 aa9.74□□□□□ -0.85
ATG4B-224ENST00000494132 NIT2Q9NQR4 276 aa9.74□□□□□ -0.85
ATG4B-224ENST00000494132 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.73□□□□□ -0.85
ATG4B-224ENST00000494132 NDUFS6O75380 124 aaKnown RBP9.73□□□□□ -0.85
ATG4B-224ENST00000494132 CRPP02741 224 aa9.73□□□□□ -0.85
ATG4B-224ENST00000494132 HAMPP81172 84 aa9.73□□□□□ -0.85
ATG4B-224ENST00000494132 CT83Q5H943 113 aa9.73□□□□□ -0.85
ATG4B-224ENST00000494132 ENHOQ6UWT2 76 aa9.73□□□□□ -0.85
ATG4B-224ENST00000494132 OSTCQ9NRP0 149 aa9.73□□□□□ -0.85
ATG4B-224ENST00000494132 IGHV1-24A0A0C4DH33 117 aa9.72□□□□□ -0.85
ATG4B-224ENST00000494132 HIGD1CA8MV81 97 aa9.72□□□□□ -0.85
ATG4B-224ENST00000494132 GCSHP23434 173 aa9.72□□□□□ -0.85
ATG4B-224ENST00000494132 RPL23P62829 140 aaKnown RBP9.72□□□□□ -0.85
ATG4B-224ENST00000494132 ELOBQ15370 118 aa9.72□□□□□ -0.85
ATG4B-224ENST00000494132 ADIRFQ15847 76 aa9.72□□□□□ -0.85
ATG4B-224ENST00000494132 TMEM241Q24JQ0 296 aa9.72□□□□□ -0.85
ATG4B-224ENST00000494132 TMEM97Q5BJF2 176 aa9.72□□□□□ -0.85
ATG4B-224ENST00000494132 ISOC2Q96AB3 205 aa9.72□□□□□ -0.85
ATG4B-224ENST00000494132 RMI2Q96E14 147 aa9.72□□□□□ -0.85
ATG4B-224ENST00000494132 V9GYV3 84 aa9.72□□□□□ -0.85
ATG4B-224ENST00000494132 RBX1P62877 108 aa9.71□□□□□ -0.86
ATG4B-224ENST00000494132 IQCJQ1A5X6 159 aa9.71□□□□□ -0.86
ATG4B-224ENST00000494132 SMIM15Q7Z3B0 74 aa9.71□□□□□ -0.86
ATG4B-224ENST00000494132 TSKUQ8WUA8 353 aa9.71□□□□□ -0.86
ATG4B-224ENST00000494132 GAS8-AS1O95177 125 aa9.7□□□□□ -0.86
ATG4B-224ENST00000494132 PEA15Q15121 130 aa9.7□□□□□ -0.86
ATG4B-224ENST00000494132 BORCS7Q96B45 105 aa9.7□□□□□ -0.86
ATG4B-224ENST00000494132 NAT8Q9UHE5 227 aa9.7□□□□□ -0.86
ATG4B-224ENST00000494132 XGP55808 180 aa9.69□□□□□ -0.86
ATG4B-224ENST00000494132 Q0VG73 95 aa9.69□□□□□ -0.86
ATG4B-224ENST00000494132 FAM74A3Q4VXF1 159 aa9.69□□□□□ -0.86
ATG4B-224ENST00000494132 LINC00269Q8N2A0 174 aa9.69□□□□□ -0.86
ATG4B-224ENST00000494132 NTN5Q8WTR8 489 aaPredicted RBP9.69□□□□□ -0.86
ATG4B-224ENST00000494132 TMEM243Q9BU79 118 aa9.69□□□□□ -0.86
ATG4B-224ENST00000494132 C1orf43Q9BWL3 253 aa9.69□□□□□ -0.86
ATG4B-224ENST00000494132 COX11Q9Y6N1 276 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms