RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 RMI2Q96E14 147 aa6.41□□□□□ -1.38
UFD1-210ENST00000494054 CHCHD7Q9BUK0 85 aa6.41□□□□□ -1.38
UFD1-210ENST00000494054 COX11Q9Y6N1 276 aa6.41□□□□□ -1.38
UFD1-210ENST00000494054 TRBV20OR9-2A0A075B6H5 130 aa6.4□□□□□ -1.38
UFD1-210ENST00000494054 C1QBP02746 253 aa6.4□□□□□ -1.38
UFD1-210ENST00000494054 GNG4P50150 75 aa6.4□□□□□ -1.38
UFD1-210ENST00000494054 MEF2BQ02080 365 aaPredicted RBP6.4□□□□□ -1.38
UFD1-210ENST00000494054 ELOBQ15370 118 aa6.4□□□□□ -1.38
UFD1-210ENST00000494054 MPV17L2Q567V2 206 aa6.4□□□□□ -1.38
UFD1-210ENST00000494054 EIF5AL1Q6IS14 154 aaKnown RBP6.4□□□□□ -1.38
UFD1-210ENST00000494054 ATRAIDQ6UW56 229 aa6.4□□□□□ -1.38
UFD1-210ENST00000494054 ENHOQ6UWT2 76 aa6.4□□□□□ -1.38
UFD1-210ENST00000494054 Q6ZSA8 131 aa6.4□□□□□ -1.38
UFD1-210ENST00000494054 TPPP3Q9BW30 176 aa6.4□□□□□ -1.38
UFD1-210ENST00000494054 FLG2Q5D862 2391 aaPredicted RBP6.39□□□□□ -1.39
UFD1-210ENST00000494054 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
UFD1-210ENST00000494054 TEX46H3BTG2 121 aa6.39□□□□□ -1.39
UFD1-210ENST00000494054 KCNIP4Q6PIL6 250 aa6.39□□□□□ -1.39
UFD1-210ENST00000494054 Q6ZNX1 250 aa6.39□□□□□ -1.39
UFD1-210ENST00000494054 SLC51BQ86UW2 128 aa6.39□□□□□ -1.39
UFD1-210ENST00000494054 C15orf54Q8N8G6 183 aa6.39□□□□□ -1.39
UFD1-210ENST00000494054 Q8N976 141 aa6.39□□□□□ -1.39
UFD1-210ENST00000494054 FER1L6-AS1Q8NA97 138 aa6.39□□□□□ -1.39
UFD1-210ENST00000494054 DAZAP1Q96EP5 407 aaKnown RBP6.39□□□□□ -1.39
UFD1-210ENST00000494054 AP1S3Q96PC3 154 aa6.39□□□□□ -1.39
UFD1-210ENST00000494054 CHCHD5Q9BSY4 110 aa6.39□□□□□ -1.39
UFD1-210ENST00000494054 MED9Q9NWA0 146 aa6.39□□□□□ -1.39
UFD1-210ENST00000494054 VAX2Q9UIW0 290 aa6.39□□□□□ -1.39
UFD1-210ENST00000494054 SRRM2Q9UQ35 2752 aaKnown RBP6.39□□□□□ -1.39
UFD1-210ENST00000494054 M0QY20 66 aa6.38□□□□□ -1.39
UFD1-210ENST00000494054 PDE6DO43924 150 aa6.38□□□□□ -1.39
UFD1-210ENST00000494054 IFNA1P01562 189 aa6.38□□□□□ -1.39
UFD1-210ENST00000494054 SMIM17P0DL12 118 aa6.38□□□□□ -1.39
UFD1-210ENST00000494054 BCL2P10415 239 aa6.38□□□□□ -1.39
UFD1-210ENST00000494054 RPS20P60866 119 aaKnown RBP6.38□□□□□ -1.39
UFD1-210ENST00000494054 Q0VG73 95 aa6.38□□□□□ -1.39
UFD1-210ENST00000494054 SUMO4Q6EEV6 95 aa6.38□□□□□ -1.39
UFD1-210ENST00000494054 SMIM12Q96EX1 92 aa6.38□□□□□ -1.39
UFD1-210ENST00000494054 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
UFD1-210ENST00000494054 P01737 135 aa6.37□□□□□ -1.39
UFD1-210ENST00000494054 ANGP03950 147 aaKnown RBP6.37□□□□□ -1.39
UFD1-210ENST00000494054 MGPP08493 103 aa6.37□□□□□ -1.39
UFD1-210ENST00000494054 RBX1P62877 108 aa6.37□□□□□ -1.39
UFD1-210ENST00000494054 CACNG7P62955 275 aa6.37□□□□□ -1.39
UFD1-210ENST00000494054 GAGE6Q13070 117 aa6.37□□□□□ -1.39
UFD1-210ENST00000494054 LYZL1Q6UWQ5 148 aa6.37□□□□□ -1.39
UFD1-210ENST00000494054 NUDT10Q8NFP7 164 aa6.37□□□□□ -1.39
UFD1-210ENST00000494054 NUDT11Q96G61 164 aa6.37□□□□□ -1.39
UFD1-210ENST00000494054 C1orf43Q9BWL3 253 aa6.37□□□□□ -1.39
UFD1-210ENST00000494054 F2Z2F3 143 aa6.36□□□□□ -1.39
UFD1-210ENST00000494054 CRPP02741 224 aa6.36□□□□□ -1.39
UFD1-210ENST00000494054 TMEM97Q5BJF2 176 aa6.36□□□□□ -1.39
UFD1-210ENST00000494054 C9orf62Q8N4C0 152 aa6.36□□□□□ -1.39
UFD1-210ENST00000494054 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.36□□□□□ -1.39
UFD1-210ENST00000494054 TRBV25-1A0A075B6N4 114 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 XKRY2A2RUG3 117 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 K7EN84 100 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 NTF3P20783 257 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 NKX2-5P52952 324 aaPredicted RBP6.35□□□□□ -1.39
UFD1-210ENST00000494054 IQCJQ1A5X6 159 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 KRTAP26-1Q6PEX3 210 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 CLPSL2Q6UWE3 100 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 SCXQ7RTU7 201 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 LINC00528Q8N1L1 170 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 LINC00269Q8N2A0 174 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 OCC1Q8TAD7 63 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 DEFB104AQ8WTQ1 72 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 RNASE7Q9H1E1 156 aaKnown RBP6.35□□□□□ -1.39
UFD1-210ENST00000494054 PRR34Q9NV39 138 aa6.35□□□□□ -1.39
UFD1-210ENST00000494054 IGHV1-24A0A0C4DH33 117 aa6.34□□□□□ -1.39
UFD1-210ENST00000494054 USP17L23D6RBM5 183 aa6.34□□□□□ -1.39
UFD1-210ENST00000494054 H7C1H1 209 aa6.34□□□□□ -1.39
UFD1-210ENST00000494054 CTRLP40313 264 aa6.34□□□□□ -1.39
UFD1-210ENST00000494054 PKIAP61925 76 aa6.34□□□□□ -1.39
UFD1-210ENST00000494054 MIAQ16674 131 aa6.34□□□□□ -1.39
UFD1-210ENST00000494054 RASL11AQ6T310 242 aa6.34□□□□□ -1.39
UFD1-210ENST00000494054 DPH3P1Q9H4G8 78 aa6.34□□□□□ -1.39
UFD1-210ENST00000494054 BIN3Q9NQY0 253 aa6.34□□□□□ -1.39
UFD1-210ENST00000494054 hCG_2014768A0A024R1R8 64 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 HLA-DQA1P01909 254 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 PRSS1P07477 247 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 TRGC1P0CF51 173 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 TAGLN2P37802 199 aaKnown RBP6.33□□□□□ -1.4
UFD1-210ENST00000494054 TWIST1Q15672 202 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 WDR73Q6P4I2 378 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 ALKAL2Q6UX46 152 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 AKAP14Q86UN6 197 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 C20orf203Q8NBC4 194 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 CHAC1Q9BUX1 264 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 GFRA4Q9GZZ7 299 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 RPP21Q9H633 154 aaKnown RBP6.33□□□□□ -1.4
UFD1-210ENST00000494054 NIT2Q9NQR4 276 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 UBR4Q5T4S7 5183 aa6.33□□□□□ -1.4
UFD1-210ENST00000494054 IGLV4-60A0A075B6I1 120 aa6.32□□□□□ -1.4
UFD1-210ENST00000494054 IGLV10-54A0A075B6I4 117 aa6.32□□□□□ -1.4
UFD1-210ENST00000494054 FOXA3P55318 350 aaPredicted RBP6.32□□□□□ -1.4
UFD1-210ENST00000494054 C14orf177Q52M58 125 aa6.32□□□□□ -1.4
UFD1-210ENST00000494054 GATD1Q8NB37 220 aa6.32□□□□□ -1.4
UFD1-210ENST00000494054 CIRBP-AS1Q8TBR5 109 aa6.32□□□□□ -1.4
UFD1-210ENST00000494054 GTSF1Q8WW33 167 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms