RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 M0QY20 66 aa5.29□□□□□ -1.56
VEGFA-214ENST00000493786 PPP1R17O96001 155 aa5.29□□□□□ -1.56
VEGFA-214ENST00000493786 LINC00315P59091 139 aa5.29□□□□□ -1.56
VEGFA-214ENST00000493786 COX19Q49B96 90 aa5.29□□□□□ -1.56
VEGFA-214ENST00000493786 FAM104BQ5XKR9 115 aa5.29□□□□□ -1.56
VEGFA-214ENST00000493786 ZNRF2Q8NHG8 242 aa5.29□□□□□ -1.56
VEGFA-214ENST00000493786 DNAJC30Q96LL9 226 aa5.29□□□□□ -1.56
VEGFA-214ENST00000493786 SMCO4Q9NRQ5 59 aa5.29□□□□□ -1.56
VEGFA-214ENST00000493786 LY6G6CO95867 125 aa5.28□□□□□ -1.56
VEGFA-214ENST00000493786 RAB4AP20338 218 aa5.28□□□□□ -1.56
VEGFA-214ENST00000493786 CKS2P33552 79 aa5.28□□□□□ -1.56
VEGFA-214ENST00000493786 OR10J3Q5JRS4 329 aa5.28□□□□□ -1.56
VEGFA-214ENST00000493786 LGALS9CQ6DKI2 356 aa5.28□□□□□ -1.56
VEGFA-214ENST00000493786 DAZ4Q86SG3 579 aaKnown RBP5.28□□□□□ -1.56
VEGFA-214ENST00000493786 GATD1Q8NB37 220 aa5.28□□□□□ -1.56
VEGFA-214ENST00000493786 NEXN-AS1Q8NBZ9 246 aa5.28□□□□□ -1.56
VEGFA-214ENST00000493786 GTSF1LQ9H1H1 148 aa5.28□□□□□ -1.56
VEGFA-214ENST00000493786 NIT2Q9NQR4 276 aa5.28□□□□□ -1.56
VEGFA-214ENST00000493786 DAZ3Q9NR90 486 aaKnown RBP5.28□□□□□ -1.56
VEGFA-214ENST00000493786 HLA-DQA1P01909 254 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 PPBPP02775 128 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 MT-ND6P03923 174 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 TIRAPP58753 221 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 UBE2D3P61077 147 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 UBE2D2P62837 147 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 TMEM97Q5BJF2 176 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 ATRAIDQ6UW56 229 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 LINC00476Q8WZB0 136 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 RNF185Q96GF1 192 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 ST20Q9HBF5 79 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 DYNC2H1Q8NCM8 4307 aaKnown RBP5.27□□□□□ -1.57
VEGFA-214ENST00000493786 NACAE9PAV3 2078 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 TENM2Q9NT68 2774 aa5.27□□□□□ -1.57
VEGFA-214ENST00000493786 TGIF2-C20orf24A0A0A6YYL0 155 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 TRAV8-6A0A0B4J262 113 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 D6R8Y8 96 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 SMKR1H3BMG3 65 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 NCR2O95944 276 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 APCSP02743 223 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 LINC00694P0DN24 101 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 ELOBQ15370 118 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 ESRGQ1W209 222 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 MRPL51Q4U2R6 128 aaKnown RBP5.26□□□□□ -1.57
VEGFA-214ENST00000493786 LYPD5Q6UWN5 251 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 TMEM136Q6ZRR5 245 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 CBLN2Q8IUK8 224 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 ORMDL3Q8N138 153 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 RPL39LQ96EH5 51 aaKnown RBP5.26□□□□□ -1.57
VEGFA-214ENST00000493786 GNB1LQ9BYB4 327 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 MRPS16Q9Y3D3 137 aaKnown RBP5.26□□□□□ -1.57
VEGFA-214ENST00000493786 LINC00588Q9Y4M8 146 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 PLECQ15149 4684 aaKnown RBP5.26□□□□□ -1.57
VEGFA-214ENST00000493786 CSMD3Q7Z407 3707 aa5.26□□□□□ -1.57
VEGFA-214ENST00000493786 TRBV24-1A0A075B6N3 115 aa5.25□□□□□ -1.57
VEGFA-214ENST00000493786 IGHV3-38A0A0C4DH36 116 aa5.25□□□□□ -1.57
VEGFA-214ENST00000493786 SDHAF1A6NFY7 115 aa5.25□□□□□ -1.57
VEGFA-214ENST00000493786 PMCHP20382 165 aa5.25□□□□□ -1.57
VEGFA-214ENST00000493786 FABP9Q0Z7S8 132 aa5.25□□□□□ -1.57
VEGFA-214ENST00000493786 COTL1Q14019 142 aa5.25□□□□□ -1.57
VEGFA-214ENST00000493786 LELP1Q5T871 98 aa5.25□□□□□ -1.57
VEGFA-214ENST00000493786 PRELID3AQ96N28 172 aa5.25□□□□□ -1.57
VEGFA-214ENST00000493786 Q9UF83 564 aa5.25□□□□□ -1.57
VEGFA-214ENST00000493786 LAMTOR2Q9Y2Q5 125 aa5.25□□□□□ -1.57
VEGFA-214ENST00000493786 TRBV25-1A0A075B6N4 114 aa5.24□□□□□ -1.57
VEGFA-214ENST00000493786 IGHV1-24A0A0C4DH33 117 aa5.24□□□□□ -1.57
VEGFA-214ENST00000493786 TRBV6-5A0A0K0K1A5 114 aa5.24□□□□□ -1.57
VEGFA-214ENST00000493786 LCE6AA0A183 80 aa5.24□□□□□ -1.57
VEGFA-214ENST00000493786 PHOX2AO14813 284 aa5.24□□□□□ -1.57
VEGFA-214ENST00000493786 TNFRSF6BO95407 300 aa5.24□□□□□ -1.57
VEGFA-214ENST00000493786 PKIAP61925 76 aa5.24□□□□□ -1.57
VEGFA-214ENST00000493786 SUMO2P61956 95 aaKnown RBP5.24□□□□□ -1.57
VEGFA-214ENST00000493786 KIR2DL4Q99706 377 aa5.24□□□□□ -1.57
VEGFA-214ENST00000493786 C20orf78Q9BR46 151 aa5.24□□□□□ -1.57
VEGFA-214ENST00000493786 UPK3BQ9BT76 320 aa5.24□□□□□ -1.57
VEGFA-214ENST00000493786 MRPL18Q9H0U6 180 aaKnown RBP5.24□□□□□ -1.57
VEGFA-214ENST00000493786 TRAPPC1Q9Y5R8 145 aa5.24□□□□□ -1.57
VEGFA-214ENST00000493786 TRBV6-8A0A0A6YYG3 113 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 I3L3M4 83 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 VCYO14598 125 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 UBE2L6O14933 153 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 TCAPO15273 167 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 SIVA1O15304 175 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 NPYP01303 97 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 FCER1GP30273 86 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 RPS10P46783 165 aaKnown RBP5.23□□□□□ -1.57
VEGFA-214ENST00000493786 AMTP48728 403 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 TTC32Q5I0X7 151 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 NRACQ8N912 160 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 CHCHD5Q9BSY4 110 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 TMEM70Q9BUB7 260 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 MAP1LC3AQ9H492 121 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 Q9H8V8 135 aa5.23□□□□□ -1.57
VEGFA-214ENST00000493786 TRAV9-2A0A087WT02 112 aa5.22□□□□□ -1.57
VEGFA-214ENST00000493786 A0A087WX48 190 aa5.22□□□□□ -1.57
VEGFA-214ENST00000493786 TRBV27A0A0K0K1C4 114 aa5.22□□□□□ -1.57
VEGFA-214ENST00000493786 LOC105371267A0A1B0GV96 52 aa5.22□□□□□ -1.57
VEGFA-214ENST00000493786 TMEM262E9PQX1 116 aa5.22□□□□□ -1.57
VEGFA-214ENST00000493786 GAS8-AS1O95177 125 aa5.22□□□□□ -1.57
VEGFA-214ENST00000493786 RAB5AP20339 215 aa5.22□□□□□ -1.57
VEGFA-214ENST00000493786 KIAA1644Q3SXP7 199 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms