RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 IGHV3-64A0A075B6Q5 118 aa7.57□□□□□ -1.2
GPNMB-214ENST00000492858 GCGP01275 180 aa7.57□□□□□ -1.2
GPNMB-214ENST00000492858 TAGLN2P37802 199 aaKnown RBP7.57□□□□□ -1.2
GPNMB-214ENST00000492858 CNBPP62633 177 aaKnown RBP7.57□□□□□ -1.2
GPNMB-214ENST00000492858 GNG5P63218 68 aa7.57□□□□□ -1.2
GPNMB-214ENST00000492858 PRR3P79522 188 aaKnown RBP7.57□□□□□ -1.2
GPNMB-214ENST00000492858 MIAQ16674 131 aa7.57□□□□□ -1.2
GPNMB-214ENST00000492858 REG3GQ6UW15 175 aa7.57□□□□□ -1.2
GPNMB-214ENST00000492858 C11orf52Q96A22 123 aa7.57□□□□□ -1.2
GPNMB-214ENST00000492858 MANBALQ9NQG1 85 aa7.57□□□□□ -1.2
GPNMB-214ENST00000492858 TRBV6-1A0A0K0K1D8 114 aa7.56□□□□□ -1.2
GPNMB-214ENST00000492858 SERTM2A0A1B0GWG4 89 aa7.56□□□□□ -1.2
GPNMB-214ENST00000492858 TEX46H3BTG2 121 aa7.56□□□□□ -1.2
GPNMB-214ENST00000492858 S100A4P26447 101 aaKnown RBP7.56□□□□□ -1.2
GPNMB-214ENST00000492858 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
GPNMB-214ENST00000492858 FAM74A4Q5TZK3 123 aa7.56□□□□□ -1.2
GPNMB-214ENST00000492858 CLPSL2Q6UWE3 100 aa7.56□□□□□ -1.2
GPNMB-214ENST00000492858 C5orf17Q8NAS9 161 aa7.56□□□□□ -1.2
GPNMB-214ENST00000492858 CLRN3Q8NCR9 226 aa7.56□□□□□ -1.2
GPNMB-214ENST00000492858 GTSF1Q8WW33 167 aa7.56□□□□□ -1.2
GPNMB-214ENST00000492858 MED9Q9NWA0 146 aa7.56□□□□□ -1.2
GPNMB-214ENST00000492858 EPDR1Q9UM22 224 aa7.56□□□□□ -1.2
GPNMB-214ENST00000492858 hDV102S1A0JD36 115 aa7.55□□□□□ -1.2
GPNMB-214ENST00000492858 RHODO00212 210 aa7.55□□□□□ -1.2
GPNMB-214ENST00000492858 PAGE4O60829 102 aa7.55□□□□□ -1.2
GPNMB-214ENST00000492858 TCRAP04437 139 aa7.55□□□□□ -1.2
GPNMB-214ENST00000492858 BCL2P10415 239 aa7.55□□□□□ -1.2
GPNMB-214ENST00000492858 SUMO1P63165 101 aaKnown RBP7.55□□□□□ -1.2
GPNMB-214ENST00000492858 KRTAP26-1Q6PEX3 210 aa7.55□□□□□ -1.2
GPNMB-214ENST00000492858 COX8CQ7Z4L0 72 aa7.55□□□□□ -1.2
GPNMB-214ENST00000492858 HIST1H2BAQ96A08 127 aa7.55□□□□□ -1.2
GPNMB-214ENST00000492858 FAM210AQ96ND0 272 aa7.55□□□□□ -1.2
GPNMB-214ENST00000492858 A0A087WWL8 130 aa7.54□□□□□ -1.2
GPNMB-214ENST00000492858 TRBV6-8A0A0A6YYG3 113 aa7.54□□□□□ -1.2
GPNMB-214ENST00000492858 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.54□□□□□ -1.2
GPNMB-214ENST00000492858 A0A0U1RQV1 116 aa7.54□□□□□ -1.2
GPNMB-214ENST00000492858 UBE2D3P61077 147 aa7.54□□□□□ -1.2
GPNMB-214ENST00000492858 UBE2D2P62837 147 aa7.54□□□□□ -1.2
GPNMB-214ENST00000492858 RPL36AP83881 106 aaKnown RBP7.54□□□□□ -1.2
GPNMB-214ENST00000492858 RPL36ALQ969Q0 106 aaKnown RBP7.54□□□□□ -1.2
GPNMB-214ENST00000492858 KRTAP3-3Q9BYR6 98 aa7.54□□□□□ -1.2
GPNMB-214ENST00000492858 KRTAP3-2Q9BYR7 98 aa7.54□□□□□ -1.2
GPNMB-214ENST00000492858 SMDT1Q9H4I9 107 aa7.54□□□□□ -1.2
GPNMB-214ENST00000492858 VAX2Q9UIW0 290 aa7.54□□□□□ -1.2
GPNMB-214ENST00000492858 SLPIP03973 132 aa7.53□□□□□ -1.2
GPNMB-214ENST00000492858 MEF2BQ02080 365 aaPredicted RBP7.53□□□□□ -1.2
GPNMB-214ENST00000492858 SMUG1Q53HV7 270 aa7.53□□□□□ -1.2
GPNMB-214ENST00000492858 SPINK6Q6UWN8 80 aa7.53□□□□□ -1.2
GPNMB-214ENST00000492858 CHCHD5Q9BSY4 110 aa7.53□□□□□ -1.2
GPNMB-214ENST00000492858 AP5S1Q9NUS5 200 aa7.53□□□□□ -1.2
GPNMB-214ENST00000492858 GNG13Q9P2W3 67 aa7.53□□□□□ -1.2
GPNMB-214ENST00000492858 TRBV7-3A0A075B6L6 115 aa7.52□□□□□ -1.21
GPNMB-214ENST00000492858 TRBV10-1A0A0K0K1A3 114 aa7.52□□□□□ -1.21
GPNMB-214ENST00000492858 A0A1B0GV50 99 aa7.52□□□□□ -1.21
GPNMB-214ENST00000492858 LINC00862A6NCI5 91 aa7.52□□□□□ -1.21
GPNMB-214ENST00000492858 PEX7O00628 323 aa7.52□□□□□ -1.21
GPNMB-214ENST00000492858 UBE2G2P60604 165 aa7.52□□□□□ -1.21
GPNMB-214ENST00000492858 LINC00269Q8N2A0 174 aa7.52□□□□□ -1.21
GPNMB-214ENST00000492858 PRR34Q9NV39 138 aa7.52□□□□□ -1.21
GPNMB-214ENST00000492858 PSG8Q9UQ74 426 aa7.52□□□□□ -1.21
GPNMB-214ENST00000492858 IGLV10-54A0A075B6I4 117 aa7.51□□□□□ -1.21
GPNMB-214ENST00000492858 IGKV3D-20A0A0C4DH25 116 aa7.51□□□□□ -1.21
GPNMB-214ENST00000492858 RAB19A4D1S5 217 aa7.51□□□□□ -1.21
GPNMB-214ENST00000492858 TMEM250H0YL14 139 aa7.51□□□□□ -1.21
GPNMB-214ENST00000492858 H3BVH4 76 aa7.51□□□□□ -1.21
GPNMB-214ENST00000492858 PDE6DO43924 150 aa7.51□□□□□ -1.21
GPNMB-214ENST00000492858 IFNA1P01562 189 aa7.51□□□□□ -1.21
GPNMB-214ENST00000492858 PKIAP61925 76 aa7.51□□□□□ -1.21
GPNMB-214ENST00000492858 MAJINQ3KP22 176 aa7.51□□□□□ -1.21
GPNMB-214ENST00000492858 MLST8Q9BVC4 326 aa7.51□□□□□ -1.21
GPNMB-214ENST00000492858 IL36BQ9NZH7 164 aa7.51□□□□□ -1.21
GPNMB-214ENST00000492858 C9JQL5 133 aa7.5□□□□□ -1.21
GPNMB-214ENST00000492858 S100A9P06702 114 aaKnown RBP7.5□□□□□ -1.21
GPNMB-214ENST00000492858 RAB14P61106 215 aa7.5□□□□□ -1.21
GPNMB-214ENST00000492858 CST9LP1Q5W188 147 aa7.5□□□□□ -1.21
GPNMB-214ENST00000492858 PRNTQ86SH4 94 aa7.5□□□□□ -1.21
GPNMB-214ENST00000492858 IGKV2-24A0A0C4DH68 120 aa7.49□□□□□ -1.21
GPNMB-214ENST00000492858 MUC21A0A0G2JKD1 596 aa7.49□□□□□ -1.21
GPNMB-214ENST00000492858 SCO2A0A1W2PP80 73 aa7.49□□□□□ -1.21
GPNMB-214ENST00000492858 K7EQM0 130 aa7.49□□□□□ -1.21
GPNMB-214ENST00000492858 LTAP01374 205 aa7.49□□□□□ -1.21
GPNMB-214ENST00000492858 SRP19P09132 144 aaKnown RBP7.49□□□□□ -1.21
GPNMB-214ENST00000492858 RBX1P62877 108 aa7.49□□□□□ -1.21
GPNMB-214ENST00000492858 SRSF3P84103 164 aaKnown RBP7.49□□□□□ -1.21
GPNMB-214ENST00000492858 FLI1Q01543 452 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-214ENST00000492858 COX6A2Q02221 97 aa7.49□□□□□ -1.21
GPNMB-214ENST00000492858 FMC1Q96HJ9 113 aa7.49□□□□□ -1.21
GPNMB-214ENST00000492858 ZFP30Q9Y2G7 519 aa7.49□□□□□ -1.21
GPNMB-214ENST00000492858 TRBV20OR9-2A0A075B6H5 130 aa7.48□□□□□ -1.21
GPNMB-214ENST00000492858 ARMS2P0C7Q2 107 aa7.48□□□□□ -1.21
GPNMB-214ENST00000492858 SRSF9Q13242 221 aaKnown RBP eCLIP7.48□□□□□ -1.21
GPNMB-214ENST00000492858 Q86TA4 180 aa7.48□□□□□ -1.21
GPNMB-214ENST00000492858 STPG4Q8N801 248 aa7.48□□□□□ -1.21
GPNMB-214ENST00000492858 OR10G8Q8NGN5 311 aa7.48□□□□□ -1.21
GPNMB-214ENST00000492858 SMIM12Q96EX1 92 aa7.48□□□□□ -1.21
GPNMB-214ENST00000492858 SFRP2Q96HF1 295 aa7.48□□□□□ -1.21
GPNMB-214ENST00000492858 B4DEV8 164 aa7.47□□□□□ -1.21
GPNMB-214ENST00000492858 H7C1H1 209 aa7.47□□□□□ -1.21
GPNMB-214ENST00000492858 M0R381 172 aa7.47□□□□□ -1.21
GPNMB-214ENST00000492858 GAGE6Q13070 117 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms