RNA–Protein interactions for RNA: ENST00000491876.5

C4A-257, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 880 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-257ENST00000491876 KCNIP4Q6PIL6 250 aa13.22□□□□□ -0.29
C4A-257ENST00000491876 CHCHD7Q9BUK0 85 aa13.22□□□□□ -0.29
C4A-257ENST00000491876 MED9Q9NWA0 146 aa13.22□□□□□ -0.29
C4A-257ENST00000491876 COX11Q9Y6N1 276 aa13.22□□□□□ -0.29
C4A-257ENST00000491876 FAT1Q14517 4588 aa13.22□□□□□ -0.29
C4A-257ENST00000491876 TRBV20OR9-2A0A075B6H5 130 aa13.21□□□□□ -0.29
C4A-257ENST00000491876 MGPP08493 103 aa13.21□□□□□ -0.29
C4A-257ENST00000491876 SMIM17P0DL12 118 aa13.21□□□□□ -0.29
C4A-257ENST00000491876 GNG4P50150 75 aa13.21□□□□□ -0.29
C4A-257ENST00000491876 MPV17L2Q567V2 206 aa13.21□□□□□ -0.29
C4A-257ENST00000491876 NTM-AS1Q6ZSK4 140 aa13.21□□□□□ -0.29
C4A-257ENST00000491876 SLC51BQ86UW2 128 aa13.21□□□□□ -0.29
C4A-257ENST00000491876 C15orf54Q8N8G6 183 aa13.21□□□□□ -0.29
C4A-257ENST00000491876 FER1L6-AS1Q8NA97 138 aa13.21□□□□□ -0.29
C4A-257ENST00000491876 AP1S3Q96PC3 154 aa13.21□□□□□ -0.29
C4A-257ENST00000491876 C1QBP02746 253 aa13.2□□□□□ -0.3
C4A-257ENST00000491876 ELOBQ15370 118 aa13.2□□□□□ -0.3
C4A-257ENST00000491876 ENHOQ6UWT2 76 aa13.2□□□□□ -0.3
C4A-257ENST00000491876 CHCHD5Q9BSY4 110 aa13.2□□□□□ -0.3
C4A-257ENST00000491876 PDE6DO43924 150 aa13.19□□□□□ -0.3
C4A-257ENST00000491876 IFNA1P01562 189 aa13.19□□□□□ -0.3
C4A-257ENST00000491876 BCL2P10415 239 aa13.19□□□□□ -0.3
C4A-257ENST00000491876 P01737 135 aa13.18□□□□□ -0.3
C4A-257ENST00000491876 ANGP03950 147 aaKnown RBP13.18□□□□□ -0.3
C4A-257ENST00000491876 RPS20P60866 119 aaKnown RBP13.18□□□□□ -0.3
C4A-257ENST00000491876 ATRAIDQ6UW56 229 aa13.18□□□□□ -0.3
C4A-257ENST00000491876 Q6ZNX1 250 aa13.18□□□□□ -0.3
C4A-257ENST00000491876 Q8N976 141 aa13.18□□□□□ -0.3
C4A-257ENST00000491876 FAM229AH3BQW9 127 aa13.17□□□□□ -0.3
C4A-257ENST00000491876 Q0VG73 95 aa13.17□□□□□ -0.3
C4A-257ENST00000491876 SUMO4Q6EEV6 95 aa13.17□□□□□ -0.3
C4A-257ENST00000491876 LYZL1Q6UWQ5 148 aa13.17□□□□□ -0.3
C4A-257ENST00000491876 VAX2Q9UIW0 290 aa13.17□□□□□ -0.3
C4A-257ENST00000491876 hCG_2014768A0A024R1R8 64 aa13.16□□□□□ -0.3
C4A-257ENST00000491876 M0QY20 66 aa13.16□□□□□ -0.3
C4A-257ENST00000491876 GAGE6Q13070 117 aa13.16□□□□□ -0.3
C4A-257ENST00000491876 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.16□□□□□ -0.3
C4A-257ENST00000491876 SMIM12Q96EX1 92 aa13.16□□□□□ -0.3
C4A-257ENST00000491876 C1orf43Q9BWL3 253 aa13.16□□□□□ -0.3
C4A-257ENST00000491876 CRPP02741 224 aa13.15□□□□□ -0.3
C4A-257ENST00000491876 CACNG7P62955 275 aa13.15□□□□□ -0.3
C4A-257ENST00000491876 Q6ZSA8 131 aa13.15□□□□□ -0.3
C4A-257ENST00000491876 VPS13BQ7Z7G8 4022 aa13.15□□□□□ -0.3
C4A-257ENST00000491876 CLPSL2Q6UWE3 100 aa13.14□□□□□ -0.31
C4A-257ENST00000491876 C9orf62Q8N4C0 152 aa13.14□□□□□ -0.31
C4A-257ENST00000491876 NUDT10Q8NFP7 164 aa13.14□□□□□ -0.31
C4A-257ENST00000491876 DEFB104AQ8WTQ1 72 aa13.14□□□□□ -0.31
C4A-257ENST00000491876 NUDT11Q96G61 164 aa13.14□□□□□ -0.31
C4A-257ENST00000491876 DNAH8Q96JB1 4490 aa13.13□□□□□ -0.31
C4A-257ENST00000491876 XKRY2A2RUG3 117 aa13.13□□□□□ -0.31
C4A-257ENST00000491876 NTF3P20783 257 aa13.13□□□□□ -0.31
C4A-257ENST00000491876 NKX2-5P52952 324 aaPredicted RBP13.13□□□□□ -0.31
C4A-257ENST00000491876 TRBV25-1A0A075B6N4 114 aa13.12□□□□□ -0.31
C4A-257ENST00000491876 F2Z2F3 143 aa13.12□□□□□ -0.31
C4A-257ENST00000491876 K7EN84 100 aa13.12□□□□□ -0.31
C4A-257ENST00000491876 HLA-DQA1P01909 254 aa13.12□□□□□ -0.31
C4A-257ENST00000491876 RBX1P62877 108 aa13.12□□□□□ -0.31
C4A-257ENST00000491876 TMEM97Q5BJF2 176 aa13.12□□□□□ -0.31
C4A-257ENST00000491876 ALKAL2Q6UX46 152 aa13.12□□□□□ -0.31
C4A-257ENST00000491876 OCC1Q8TAD7 63 aa13.12□□□□□ -0.31
C4A-257ENST00000491876 RNASE7Q9H1E1 156 aaKnown RBP13.12□□□□□ -0.31
C4A-257ENST00000491876 AKAP14Q86UN6 197 aa13.11□□□□□ -0.31
C4A-257ENST00000491876 BIN3Q9NQY0 253 aa13.11□□□□□ -0.31
C4A-257ENST00000491876 FLG2Q5D862 2391 aaPredicted RBP13.11□□□□□ -0.31
C4A-257ENST00000491876 IGHV1-24A0A0C4DH33 117 aa13.1□□□□□ -0.31
C4A-257ENST00000491876 H7C1H1 209 aa13.1□□□□□ -0.31
C4A-257ENST00000491876 TRGC1P0CF51 173 aa13.1□□□□□ -0.31
C4A-257ENST00000491876 PKIAP61925 76 aa13.1□□□□□ -0.31
C4A-257ENST00000491876 LINC00269Q8N2A0 174 aa13.1□□□□□ -0.31
C4A-257ENST00000491876 DPH3P1Q9H4G8 78 aa13.1□□□□□ -0.31
C4A-257ENST00000491876 IQCJQ1A5X6 159 aa13.09□□□□□ -0.31
C4A-257ENST00000491876 RASL11AQ6T310 242 aa13.09□□□□□ -0.31
C4A-257ENST00000491876 SCXQ7RTU7 201 aa13.09□□□□□ -0.31
C4A-257ENST00000491876 LINC00528Q8N1L1 170 aa13.09□□□□□ -0.31
C4A-257ENST00000491876 RPP21Q9H633 154 aaKnown RBP13.09□□□□□ -0.31
C4A-257ENST00000491876 USP17L23D6RBM5 183 aa13.08□□□□□ -0.32
C4A-257ENST00000491876 TAGLN2P37802 199 aaKnown RBP13.08□□□□□ -0.32
C4A-257ENST00000491876 CTRLP40313 264 aa13.08□□□□□ -0.32
C4A-257ENST00000491876 MIAQ16674 131 aa13.08□□□□□ -0.32
C4A-257ENST00000491876 PRR34Q9NV39 138 aa13.08□□□□□ -0.32
C4A-257ENST00000491876 TWIST1Q15672 202 aa13.07□□□□□ -0.32
C4A-257ENST00000491876 KRTAP26-1Q6PEX3 210 aa13.07□□□□□ -0.32
C4A-257ENST00000491876 SRRM2Q9UQ35 2752 aaKnown RBP13.07□□□□□ -0.32
C4A-257ENST00000491876 C14orf177Q52M58 125 aa13.06□□□□□ -0.32
C4A-257ENST00000491876 NIT2Q9NQR4 276 aa13.06□□□□□ -0.32
C4A-257ENST00000491876 IGLV4-60A0A075B6I1 120 aa13.05□□□□□ -0.32
C4A-257ENST00000491876 IGLV10-54A0A075B6I4 117 aa13.05□□□□□ -0.32
C4A-257ENST00000491876 TRAV26-2A0A0B4J265 109 aa13.05□□□□□ -0.32
C4A-257ENST00000491876 PRSS1P07477 247 aa13.05□□□□□ -0.32
C4A-257ENST00000491876 BLOC1S1P78537 153 aa13.05□□□□□ -0.32
C4A-257ENST00000491876 WDR73Q6P4I2 378 aa13.05□□□□□ -0.32
C4A-257ENST00000491876 C20orf203Q8NBC4 194 aa13.05□□□□□ -0.32
C4A-257ENST00000491876 GTSF1Q8WW33 167 aa13.05□□□□□ -0.32
C4A-257ENST00000491876 TMEM243Q9BU79 118 aa13.05□□□□□ -0.32
C4A-257ENST00000491876 CEBPGP53567 150 aa13.04□□□□□ -0.32
C4A-257ENST00000491876 FOXA3P55318 350 aaPredicted RBP13.04□□□□□ -0.32
C4A-257ENST00000491876 REG3AQ06141 175 aa13.04□□□□□ -0.32
C4A-257ENST00000491876 GFRA4Q9GZZ7 299 aa13.04□□□□□ -0.32
C4A-257ENST00000491876 GATD1Q8NB37 220 aa13.03□□□□□ -0.32
C4A-257ENST00000491876 CHAC1Q9BUX1 264 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms