RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 DEFB1P60022 68 aa6.27□□□□□ -1.41
HPS4-215ENST00000491142 DEFB114Q30KQ6 69 aa6.27□□□□□ -1.41
HPS4-215ENST00000491142 POM121L12Q8N7R1 296 aa6.27□□□□□ -1.41
HPS4-215ENST00000491142 Q8N8P6 123 aa6.27□□□□□ -1.41
HPS4-215ENST00000491142 NRACQ8N912 160 aa6.27□□□□□ -1.41
HPS4-215ENST00000491142 SNHG12Q9BXW3 62 aa6.27□□□□□ -1.41
HPS4-215ENST00000491142 PEMTQ9UBM1 199 aa6.27□□□□□ -1.41
HPS4-215ENST00000491142 PKD1P98161 4303 aa6.26□□□□□ -1.41
HPS4-215ENST00000491142 C7orf71A4D174 169 aa6.26□□□□□ -1.41
HPS4-215ENST00000491142 M0R381 172 aa6.26□□□□□ -1.41
HPS4-215ENST00000491142 RNASE3P12724 160 aaKnown RBP6.26□□□□□ -1.41
HPS4-215ENST00000491142 S100A4P26447 101 aaKnown RBP6.26□□□□□ -1.41
HPS4-215ENST00000491142 FCER1GP30273 86 aa6.26□□□□□ -1.41
HPS4-215ENST00000491142 LGALS9BQ3B8N2 356 aa6.26□□□□□ -1.41
HPS4-215ENST00000491142 LGALS9CQ6DKI2 356 aa6.26□□□□□ -1.41
HPS4-215ENST00000491142 FOXI2Q6ZQN5 318 aa6.26□□□□□ -1.41
HPS4-215ENST00000491142 WFDC3Q8IUB2 231 aa6.26□□□□□ -1.41
HPS4-215ENST00000491142 ATOH7Q8N100 152 aa6.26□□□□□ -1.41
HPS4-215ENST00000491142 DPH3P1Q9H4G8 78 aa6.26□□□□□ -1.41
HPS4-215ENST00000491142 KLK5Q9Y337 293 aaPredicted RBP6.26□□□□□ -1.41
HPS4-215ENST00000491142 HSPG2P98160 4391 aa6.25□□□□□ -1.41
HPS4-215ENST00000491142 J3KRW8 73 aa6.25□□□□□ -1.41
HPS4-215ENST00000491142 GAS8-AS1O95177 125 aa6.25□□□□□ -1.41
HPS4-215ENST00000491142 ZNF688P0C7X2 276 aa6.25□□□□□ -1.41
HPS4-215ENST00000491142 TSPOP30536 169 aa6.25□□□□□ -1.41
HPS4-215ENST00000491142 MAJINQ3KP22 176 aa6.25□□□□□ -1.41
HPS4-215ENST00000491142 PSMG4Q5JS54 123 aa6.25□□□□□ -1.41
HPS4-215ENST00000491142 FAM159AQ6UWV7 190 aa6.25□□□□□ -1.41
HPS4-215ENST00000491142 DYNLRB2Q8TF09 96 aa6.25□□□□□ -1.41
HPS4-215ENST00000491142 MRPS16Q9Y3D3 137 aaKnown RBP6.25□□□□□ -1.41
HPS4-215ENST00000491142 PHLDA3Q9Y5J5 127 aa6.25□□□□□ -1.41
HPS4-215ENST00000491142 MUC4Q99102 2169 aa6.25□□□□□ -1.41
HPS4-215ENST00000491142 HSBP1L1C9JCN9 74 aa6.24□□□□□ -1.41
HPS4-215ENST00000491142 K7EMI3 77 aa6.24□□□□□ -1.41
HPS4-215ENST00000491142 GNRH2O43555 120 aa6.24□□□□□ -1.41
HPS4-215ENST00000491142 HNRNPA3P51991 378 aaKnown RBP6.24□□□□□ -1.41
HPS4-215ENST00000491142 KIR3DS1Q14943 382 aa6.24□□□□□ -1.41
HPS4-215ENST00000491142 Q6ZN92 141 aa6.24□□□□□ -1.41
HPS4-215ENST00000491142 IFI27L1Q96BM0 104 aa6.24□□□□□ -1.41
HPS4-215ENST00000491142 C9orf85Q96MD7 179 aa6.24□□□□□ -1.41
HPS4-215ENST00000491142 AP1S3Q96PC3 154 aa6.24□□□□□ -1.41
HPS4-215ENST00000491142 KRTAP4-12Q9BQ66 201 aa6.24□□□□□ -1.41
HPS4-215ENST00000491142 C20orf78Q9BR46 151 aa6.24□□□□□ -1.41
HPS4-215ENST00000491142 SPRY2O43597 315 aa6.23□□□□□ -1.41
HPS4-215ENST00000491142 PPP1R17O96001 155 aa6.23□□□□□ -1.41
HPS4-215ENST00000491142 GATA1P15976 413 aaPredicted RBP6.23□□□□□ -1.41
HPS4-215ENST00000491142 CDKN1BP46527 198 aa6.23□□□□□ -1.41
HPS4-215ENST00000491142 TFPI2P48307 235 aa6.23□□□□□ -1.41
HPS4-215ENST00000491142 NUTF2P61970 127 aaKnown RBP6.23□□□□□ -1.41
HPS4-215ENST00000491142 RPL32P62910 135 aaKnown RBP6.23□□□□□ -1.41
HPS4-215ENST00000491142 AMTNQ6UX39 209 aa6.23□□□□□ -1.41
HPS4-215ENST00000491142 PHLDA1Q8WV24 401 aaPredicted RBP6.23□□□□□ -1.41
HPS4-215ENST00000491142 KIF25-AS1Q9Y6Z4 181 aa6.23□□□□□ -1.41
HPS4-215ENST00000491142 TRAV12-3A0A0B4J271 114 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 IGHV3-16A0A0C4DH30 117 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 A0A1B0GV90 55 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 hDV102S1A0JD36 115 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 HLA-DRB4P13762 266 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 LAGE3Q14657 143 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 DEFB135Q30KP9 77 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 TMEM61Q8N0U2 210 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 SVIPQ8NHG7 77 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 RASL10AQ92737 203 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 PMCHL2Q9BQD1 86 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 SMIM2Q9BVW6 85 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 GOLT1BQ9Y3E0 138 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 TIMM8BQ9Y5J9 83 aaPredicted RBP6.22□□□□□ -1.41
HPS4-215ENST00000491142 HLA-DRB4X5D2U9 266 aa6.22□□□□□ -1.41
HPS4-215ENST00000491142 IGHV1OR15-1A0A075B7D0 117 aa6.21□□□□□ -1.42
HPS4-215ENST00000491142 TRAV26-2A0A0B4J265 109 aa6.21□□□□□ -1.42
HPS4-215ENST00000491142 TRAV25A0A0B4J276 109 aa6.21□□□□□ -1.42
HPS4-215ENST00000491142 ATP5LO75964 103 aa6.21□□□□□ -1.42
HPS4-215ENST00000491142 LINC00315P59091 139 aa6.21□□□□□ -1.42
HPS4-215ENST00000491142 SUMO2P61956 95 aaKnown RBP6.21□□□□□ -1.42
HPS4-215ENST00000491142 ORMDL2Q53FV1 153 aa6.21□□□□□ -1.42
HPS4-215ENST00000491142 SLC25A34Q6PIV7 304 aa6.21□□□□□ -1.42
HPS4-215ENST00000491142 C14orf178Q8N769 122 aaPredicted RBP6.21□□□□□ -1.42
HPS4-215ENST00000491142 KRTAP4-5Q9BYR2 181 aa6.21□□□□□ -1.42
HPS4-215ENST00000491142 TP53TG1Q9Y2A0 90 aa6.21□□□□□ -1.42
HPS4-215ENST00000491142 TRGV11A0A075B6L2 103 aa6.2□□□□□ -1.42
HPS4-215ENST00000491142 H0Y8G0 127 aa6.2□□□□□ -1.42
HPS4-215ENST00000491142 SMIM17P0DL12 118 aa6.2□□□□□ -1.42
HPS4-215ENST00000491142 COX8AP10176 69 aa6.2□□□□□ -1.42
HPS4-215ENST00000491142 FXYD7P58549 80 aa6.2□□□□□ -1.42
HPS4-215ENST00000491142 SPINK13Q1W4C9 94 aa6.2□□□□□ -1.42
HPS4-215ENST00000491142 SYT8Q8NBV8 401 aa6.2□□□□□ -1.42
HPS4-215ENST00000491142 SPAG8Q99932 426 aaPredicted RBP6.2□□□□□ -1.42
HPS4-215ENST00000491142 LINC00467Q9BRT7 94 aa6.2□□□□□ -1.42
HPS4-215ENST00000491142 HERC1Q15751 4861 aa6.2□□□□□ -1.42
HPS4-215ENST00000491142 AGRNO00468 2067 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 TRAV12-2A0A075B6T6 113 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 TRBV6-5A0A0K0K1A5 114 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 A0A1B0GVY2 172 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 LINC01549A6NIU2 74 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 H3BMM0 161 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 MGPP08493 103 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 APOC4P55056 127 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 DEFB131AP59861 70 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 ODF1Q14990 250 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 COL5A1-AS1Q5SY13 56 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms